FC931134

Overview
NameFC931134
Unique NameFC931134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 59/168 (35.12%), Postives = 81/168 (48.21%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            +A +AEFIA            I +   T    N       G++ IA A    +F+ V   A  SGGH+NPAVTFGL +G  ++++  L Y VAQ LGA   C    FV   +    +   GG  EL        G+  EI+ TF LVYTV+ +A DPK+    +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAFGQLT----NGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTEL-------EGVVFEIVITFALVYTVYATAADPKKGSLGTIAPI 175          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ YM AQ LGA+ G   + +   +   R     N L  G + G     EI  T   V  +F+  D +R  R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAV-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 57/166 (34.34%), Postives = 78/166 (46.99%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ YMVAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R  R
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 55/166 (33.13%), Postives = 84/166 (50.60%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGY-KSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            +A ++EFIA            + + K  +D  L+       G++ +A A    +F+ V   A ISGGH+NPAVT GL +G  +++I    Y +AQCLG+I  C  +  F     N      + +A G     G+  EI+ TF LVYTV+ +A DPK+    +  P+
Sbjct:   19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVF---VTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPI 175          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 56/166 (33.73%), Postives = 76/166 (45.78%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R  R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ Y+VAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R  R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 49/139 (35.25%), Postives = 70/139 (50.36%), Query Frame = 1
Query:  307 LNTDQCGGVGI------LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            + T  C GV I      + IA  FG +I  +V C   +SG HINPAVT GL +   +S+++A+ Y++ QC+GAI G   +K    + + R       LA G     G   E   TFVL+  V S  D +R+   +  PV
Sbjct:   42 IGTGSCTGVQISEGDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRKNLGNAAPV 179          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13
Identity = 41/123 (33.33%), Postives = 65/123 (52.85%), Query Frame = 1
Query:  328 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV-------KAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPK 675
            G+G+LG+A+AFG  +  + +    ISG H+NPAV+FGL +G +      L Y++AQ +GAI   G +         F+ S      G A+    GY  G G  +E++ T + +  +  ATD +
Sbjct:   34 GIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDAR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 1
Query:  346 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            IA+ FG ++  L      +SG HINPAVT GL +   VS+++   Y+V+QC+GAI G   +KA   S     GG G   +A G + G G+  E + TF+LV+ V    D +R
Sbjct:   57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR 166          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 54/169 (31.95%), Postives = 77/169 (45.56%), Query Frame = 1
Query:  214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGAN----ELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRERRDSHVPV 705
            RA I+EFIA            +        +      GG+  + +A A G  + + V     +SGGH+NPAVTFG  +G +VSL+RA+LY  AQ LGA+     ++           GGA      LA G   G  +  E + TF  VY  + +  DPKR    +  P+
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALG--LAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLAT--------GGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPL 186          
The following BLAST results are available for this feature:
BLAST of FC931134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
TIP22_MAIZE1.672e-1435.12Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
MIP_RABIT2.184e-1433.73Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
MIP_BOVIN2.852e-1434.34Lens fiber major intrinsic protein OS=Bos taurus G... [more]
TIP22_ARATH3.725e-1433.13Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
MIP_CANFA4.865e-1433.73Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_SHEEP6.354e-1433.73Lens fiber major intrinsic protein OS=Ovis aries G... [more]
AQP_CICVR6.354e-1435.25Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQPZ_PSEPK1.084e-1333.33Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQP_ANOGA1.415e-1339.29Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP32_MAIZE1.849e-1331.95Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34101H01EF PostHarvP1 Citrus clementina cDNA clone C34101H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931134 ID=FC931134; Name=FC931134; organism=Citrus clementina; type=EST; length=706bp
CATCATTAAACTCTGTACCAACACAACAGTCGTAGCTCTTGTTTCTCCCT
CTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATG
TTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGAC
TACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAA
GTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGT
TTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGAT
CCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGC
TTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTA
TTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGG
CGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTT
GGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACT
ACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAG
GGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACAC
TGTTTTCTCTGCCACTGATCCTAAAAGAGAGCGCAGAGACTCCCATGTTC
CGGTCT
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