FC931134

Overview
NameFC931134
Unique NameFC931134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931134_ssr121 microsatellite FC931134_ssr121:121..132. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig13179 contig Ccv1_Contig13179:44..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 52/166 (31.33%), Postives = 74/166 (44.58%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            E   +SF+RAV AEF              + + +           G   +L IA AFG ++  +V     +SG HINPAVTF   +G ++SL RA+ Y+ AQ LGA+ G   +     +   R     N L  G + G     EI  T   V  +F+  D +R  R
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASLKWAA-----------GPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAI-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 55/166 (33.13%), Postives = 76/166 (45.78%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  Y+ AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R  R
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 154          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 55/166 (33.13%), Postives = 76/166 (45.78%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  Y+ AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R  R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 48/168 (28.57%), Postives = 77/168 (45.83%), Query Frame = 1
Query:  205 SFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSHVPV 705
            + +R ++AEF+             +G+     P +            IA+ FG ++  L      +SG HINPAVT GL +   +S+++   Y+V+QC+GAI G   +KA   S  +  GG G   +      G G+  E + TF+LV+ V    D +R       P+
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----------IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS--DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPL 176          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 54/163 (33.13%), Postives = 74/163 (45.40%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L    + G     EI  T   V  +F+  D +R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERR 153          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 55/166 (33.13%), Postives = 79/166 (47.59%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            EL   SF+RA++AEF+             +G   +  P       G  G+LG A AFG     LV     +SGGHINPA+T    L  ++SL RAL Y++AQ LGA+ G G +     +   R   G + L      G G   E++ T   +  VF++ D + + R
Sbjct:    3 ELRSSSFWRAILAEFLGSLLYTLLG----LGASLRWAP-------GPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAV-RGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 55/166 (33.13%), Postives = 75/166 (45.18%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERR 687
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L  G +       EI  T   V  +F+  D +R  R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 55/169 (32.54%), Postives = 77/169 (45.56%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRERRDSH 696
            EL   +F RAV+AEF+A            + +  Q  P+          +L IA AFG  I  LV     +SG HINPAVT    +G  VS +RA+ Y+ AQ LGA+ G   +         R     N L +    G  +  E+  T  LV  +F +TD +R ++  H
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWP-QALPS----------VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAI-RGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH 159          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 54/163 (33.13%), Postives = 73/163 (44.79%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            EL   +F RAV+AEF+A            + + S               +L IA AFG  I ILV     +SG HINPAVT    +G  VS +RA  Y+ AQ LGA+ G   +         R     N L +    G  +  E+  T  LV  +F++TD +R
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPP-----------SVLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEI-RGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERR 153          
BLAST of FC931134 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 55/163 (33.74%), Postives = 76/163 (46.63%), Query Frame = 1
Query:  190 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 678
            EL   +F RAV AEF+A            + +  Q  P+          +L IA AFG  I  LV     ISG HINPAVT    +G  VS++RA  Y+ AQ LGA+ G   +     +   R     N L++    G  +  E+  T  LV  +F++TD +R
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWP-QALPS----------VLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADI-RGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERR 153          
The following BLAST results are available for this feature:
BLAST of FC931134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
MIP_RANPI1.849e-1331.33Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_RAT3.153e-1333.13Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE3.153e-1333.13Lens fiber major intrinsic protein OS=Mus musculus... [more]
AQP_AEDAE4.118e-1328.57Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
MIP_HUMAN7.025e-1333.13Lens fiber major intrinsic protein OS=Homo sapiens... [more]
MIP_CHICK7.025e-1333.13Lens fiber major intrinsic protein OS=Gallus gallu... [more]
MIP_CAVPO9.175e-1333.13Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQP2_SHEEP9.175e-1332.54Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP2_RAT2.044e-1233.13Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
AQP2_HUMAN2.044e-1233.74Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34101H01EF PostHarvP1 Citrus clementina cDNA clone C34101H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931134 ID=FC931134; Name=FC931134; organism=Citrus clementina; type=EST; length=706bp
CATCATTAAACTCTGTACCAACACAACAGTCGTAGCTCTTGTTTCTCCCT
CTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATG
TTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGAC
TACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAA
GTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGT
TTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGAT
CCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGC
TTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTA
TTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGG
CGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTT
GGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACT
ACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAG
GGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACAC
TGTTTTCTCTGCCACTGATCCTAAAAGAGAGCGCAGAGACTCCCATGTTC
CGGTCT
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