FC931138

Overview
NameFC931138
Unique NameFC931138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB3_METHJ (V-type ATP synthase beta chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpB3 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.934e-46
Identity = 95/177 (53.67%), Postives = 124/177 (70.06%), Query Frame = 2
Query:  152 MEYRTVTGVA---GPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK 673
            + +RT TGV+   GPL++LD V+G  Y EI  I L  G +R GQVLE    +A+VQVF GT  +D + T V+F GE +K  +S DMLGR F+GS +PID G P++PE   DI GS INPS R +P + IQTGIS+ID MN++ RGQK+P+FS AGLPHN +A+QI RQA +  + EK
Sbjct:    4 LRFRTYTGVSKVVGPLMVLDGVEGIGYGEIAEITLPGGEVRIGQVLETTTTRAMVQVFRGTRDLDTEKTQVRFRGEPMKISLSSDMLGRTFDGSARPIDGGGPVIPECIRDIYGSPINPSAREHPRDSIQTGISSIDGMNTLVRGQKLPIFSGAGLPHNLLASQIARQAKVTGQAEK 180          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB2_METHJ (V-type ATP synthase beta chain 2 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpB2 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.934e-46
Identity = 93/175 (53.14%), Postives = 124/175 (70.86%), Query Frame = 2
Query:  125 MEEGTLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            M+ G+L + +EY+TV  V+GPL+ +++ K   + E   I L DG  R GQ+L++  + AVVQVFEGT GID+  TTV+FTG+     VS DMLGR+ +G G+P D GP I+PEA LDI+G  INP  R  P E IQTGIS ID +N++ RGQK+P+FS AGLP N++AAQI +QA
Sbjct:    1 MQHGSL-ITVEYQTVNYVSGPLIFVERPKEISFGETAQIILPDGEARTGQILDISEDIAVVQVFEGTRGIDSHVTTVRFTGQSPLLDVSYDMLGRVLDGVGRPRDGGPEIIPEARLDIAGMPINPYSRDKPAEFIQTGISAIDALNTLVRGQKLPIFSGAGLPANQLAAQIAKQA 174          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_CLOBJ (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Kyoto / Type A2) GN=atpB PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45
Identity = 90/169 (53.25%), Postives = 125/169 (73.96%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVK 661
            EYRTV  V GPL+++D+V+   + E+V I L +G  RRG+VLE++ +KA+VQ+FEG++GI+ K   V+F G+ L+  VS DMLGR+F+G G P D GP I+ +   DISG  INP  R YP+E IQTG+S ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++K
Sbjct:    4 EYRTVKEVVGPLMLVDQVESVSFDELVEIELHNGEKRRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFDGLGNPKDGGPKIIADEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLK 172          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_PICTO (V-type ATP synthase beta chain OS=Picrophilus torridus GN=atpB PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.726e-45
Identity = 91/168 (54.17%), Postives = 119/168 (70.83%), Query Frame = 2
Query:  158 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVK 661
            YR+V+ ++GPL+ ++ VK   Y EIV+I L +G  RRGQVLE     ++VQ++  T+GI     +V+FTG   + PVS DMLGRIFNG G+PIDNGP I  +  LDI+GS+INP  R  P E +QTGISTID MN++  GQK+P+FS AGL HN +AAQI RQA  +K
Sbjct:    6 YRSVSQISGPLLFVEDVKDTSYNEIVDIILDNGEKRRGQVLETRNGLSIVQIYGSTTGISTSNASVKFTGSTFRLPVSDDMLGRIFNGFGEPIDNGPKIYSKDKLDINGSAINPYSREEPSEFVQTGISTIDGMNTLVMGQKLPIFSGAGLSHNRLAAQIARQAKTLK 173          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_HALVO (V-type ATP synthase beta chain OS=Halobacterium volcanii GN=atpB PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.726e-45
Identity = 91/165 (55.15%), Postives = 118/165 (71.52%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            EY+T+T ++GPLV  +  +   Y EIV I    G  +RGQVLE       +QVFEGTSGID    +V+F GE LK PV+ D+LGR+ +GSG+PID GP I+P+   DI G++INP  R YPEE IQTG+S ID MN++ RGQK+P+FSA+GLPHN++A QI RQA
Sbjct:    3 EYQTITEISGPLVFAEVDEPIGYDEIVEIETPQGETKRGQVLESSEGLVAIQVFEGTSGIDRN-ASVRFLGETLKMPVTEDLLGRVLDGSGQPIDGGPEIVPDERRDIVGAAINPYSREYPEEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQA 166          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_AERPE (V-type ATP synthase beta chain OS=Aeropyrum pernix GN=atpB PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.726e-45
Identity = 90/165 (54.55%), Postives = 117/165 (70.91%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            EYR ++ + GPL++++ V    Y EIV +    G  RRG+VLEV    AVVQVFEGT+GI    T V+F G  L+ PV+ DMLGRI NG G+PID GP I  +   D++G+ +NP+ER YPE+ IQTG+S ID MN++ RGQK+P+FS AGLPHN +AAQI RQA
Sbjct:    7 EYRNISEIKGPLLVVEGVSRVAYDEIVEVETAAGEKRRGRVLEVGMGYAVVQVFEGTTGISPTGTVVRFMGRPLEIPVTEDMLGRIMNGLGEPIDGGPKIDADERRDVNGAPLNPAERAYPEDFIQTGVSAIDGMNTLVRGQKLPIFSGAGLPHNRLAAQIARQA 171          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB2_GOSHI (V-type proton ATPase subunit B 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.255e-45
Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 2
Query:  404 GRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNL 685
            GRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIP FSAAGLPHNEIAAQICRQAGLVKRLEK  +L
Sbjct:    1 GRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPFFSAAGLPHNEIAAQICRQAGLVKRLEKAGDL 94          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_CLONN (V-type ATP synthase beta chain OS=Clostridium novyi (strain NT) GN=atpB PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.023e-45
Identity = 86/165 (52.12%), Postives = 120/165 (72.73%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            EY+TV  V GPL++++  KG  Y E+V I L  G +R G+VLE+  +KA++Q+FEG++GI+ K T  +F G+ L+  +S DMLGR+F+G G+P D GP I+PE   DI+G  +NP  R YP E IQTG+S ID +N++ RGQK+P+FS +GLPH E+AAQI RQA
Sbjct:    4 EYKTVQEVVGPLMLVEGTKGVTYDELVEIELQTGEIRHGRVLEISEDKALIQLFEGSTGINLKETKTRFLGKPLEVGLSEDMLGRVFDGMGRPKDGGPKIIPEERRDINGEPLNPFARDYPSEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPHAELAAQIARQA 168          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_HYPBU (V-type ATP synthase beta chain OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=atpB PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45
Identity = 92/172 (53.49%), Postives = 115/172 (66.86%), Query Frame = 2
Query:  134 GTLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            G   V  EY T+  V GPL+I++ +    Y EIV + L  G  RRG+VLE     AVVQVFEGT+GI    T V+F G  L+  VS +MLGR+FNG G PID GPPI      DI+G  +NP+ R YPE+ IQTGIS ID MN++ RGQK+P+FS +GLPHN++A QI RQA
Sbjct:    6 GPSPVIREYETIREVRGPLLIVEGISDAAYDEIVEVELPSGERRRGRVLETARGYAVVQVFEGTTGISVTGTKVRFLGRTLEIKVSDEMLGRVFNGLGDPIDGGPPITSGVRRDINGEPLNPAARAYPEDFIQTGISAIDGMNTMVRGQKLPIFSGSGLPHNKLAVQIARQA 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_HALSA (V-type ATP synthase beta chain OS=Halobacterium salinarium GN=atpB PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45
Identity = 90/176 (51.14%), Postives = 124/176 (70.45%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDN 682
            EY+T+T V+GPLV ++  +   Y EIV I   +G ++RGQVLE       +QVFEGT G+  K  +V+F GE LK PV+ D+LGR+ +GSG PID GP I+P+  +DI G +INP  R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPH+++A QI RQA + +   +TD+
Sbjct:    3 EYQTITEVSGPLVYVETDEPIGYDEIVEIETPNGDVKRGQVLESSDGFVAIQVFEGTEGV-GKDASVRFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETDD 177          
The following BLAST results are available for this feature:
BLAST of FC931138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
VATB3_METHJ5.934e-4653.67V-type ATP synthase beta chain 3 OS=Methanospirill... [more]
VATB2_METHJ5.934e-4653.14V-type ATP synthase beta chain 2 OS=Methanospirill... [more]
VATB_CLOBJ1.012e-4553.25V-type ATP synthase beta chain OS=Clostridium botu... [more]
VATB_PICTO1.726e-4554.17V-type ATP synthase beta chain OS=Picrophilus torr... [more]
VATB_HALVO1.726e-4555.15V-type ATP synthase beta chain OS=Halobacterium vo... [more]
VATB_AERPE1.726e-4554.55V-type ATP synthase beta chain OS=Aeropyrum pernix... [more]
VATB2_GOSHI2.255e-4595.74V-type proton ATPase subunit B 2 (Fragment) OS=Gos... [more]
VATB_CLONN5.023e-4552.12V-type ATP synthase beta chain OS=Clostridium novy... [more]
VATB_HYPBU6.561e-4553.49V-type ATP synthase beta chain OS=Hyperthermus but... [more]
VATB_HALSA6.561e-4551.14V-type ATP synthase beta chain OS=Halobacterium sa... [more]

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Properties
Property NameValue
Genbank descriptionC34101H05EF PostHarvP1 Citrus clementina cDNA clone C34101H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931138 ID=FC931138; Name=FC931138; organism=Citrus clementina; type=EST; length=686bp
GCATCTCTCATTGCCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCA
CTCACAGAGATCACAAGAAAGACCAAAAAAAAAGAAAAAAATTGAAAATG
GGTGTGGCACAAAACAATGTTGACATGGAGGAGGGTACTCTGGAAGTCGC
CATGGAGTACAGAACGGTCACCGGAGTTGCTGGGCCTCTAGTTATCCTTG
ATAAAGTCAAGGGACCCAAATATTATGAGATTGTCAATATTCGGTTGGGA
GATGGAACAATGCGACGTGGTCAGGTCCTAGAAGTTGATGGAGAGAAAGC
TGTTGTTCAGGTCTTTGAAGGGACATCCGGAATTGACAATAAATTTACAA
CTGTGCAGTTTACAGGGGAGGTTCTGAAGACTCCTGTCTCATTGGATATG
CTTGGGCGCATTTTTAATGGTTCTGGGAAACCCATTGATAATGGTCCCCC
AATTTTGCCAGAGGCTTACTTGGATATATCCGGAAGTTCTATCAACCCTA
GTGAGAGAACCTATCCTGAAGAGATGATACAGACAGGGATTTCTACCATT
GATGTGATGAACTCCATTGCTAGAGGACAAAAGATCCCTCTTTTTTCTGC
TGCCGGTCTTCCCCATAATGAAATTGCTGCTCAGATTTGTCGCCAGGCTG
GTTTAGTCAAGCGATTGGAGAAGACTGATAATCTTC
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