FC931138

Overview
NameFC931138
Unique NameFC931138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_STRP4 (V-type ATP synthase beta chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpB PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.248e-52
Identity = 97/170 (57.06%), Postives = 131/170 (77.06%), Query Frame = 2
Query:  140 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            + V  EYRT + V GPL+I+++V    Y E+V I+L +G +RRGQVLE+  +KA+VQ+FEG+SGI+ + + ++F G  L+  VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA
Sbjct:    1 MSVIKEYRTASEVVGPLMIVEQVNNVSYNELVEIQLHNGEIRRGQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQA 170          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_PYRAB (V-type ATP synthase beta chain OS=Pyrococcus abyssi GN=atpB PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.234e-51
Identity = 97/170 (57.06%), Postives = 126/170 (74.12%), Query Frame = 2
Query:  140 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            +E++ EY T++ + GPL+I++ VKG  Y E+V I    G  R+GQVL+     A+VQVFEGT  +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA
Sbjct:    2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQA 171          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_METST (V-type ATP synthase beta chain OS=Methanosphaera stadtmanae (strain DSM 3091) GN=atpB PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.106e-51
Identity = 104/182 (57.14%), Postives = 132/182 (72.53%), Query Frame = 2
Query:  113 NNVDMEEGTLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLV 658
            N+VD++        EY TV+ VAGPL+++  V+G  Y EIV I    G  R GQVLEV  + AVVQVFEGTS ++ + T V+FTGE  K  +S DMLGRIFNG GKPID GP I+P+  LD++GS +NPS R +P E IQTGISTID MN++ RGQK+P+FS +GLPHNE+AAQI RQA ++
Sbjct:    2 NDVDIK------TREYTTVSEVAGPLMVVQGVEGAAYNEIVEIETPAGENRTGQVLEVKEDIAVVQVFEGTSDLNTESTKVRFTGETAKIGLSTDMLGRIFNGIGKPIDGGPDIIPDQELDVNGSPMNPSAREFPAEFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVI 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_DESSY (V-type ATP synthase beta chain OS=Desulfurococcus sp. (strain SY) GN=atpB PE=3 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.106e-51
Identity = 100/174 (57.47%), Postives = 126/174 (72.41%), Query Frame = 2
Query:  152 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK 673
            MEY TV+ + GPL+I++ VKG  Y E+V I    G  R+GQVLE     A+VQVFEGT  +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++   E+
Sbjct:    4 MEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQ 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_THESI (V-type ATP synthase beta chain OS=Thermococcus sp. (strain KI) GN=atpB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.750e-51
Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 2
Query:  152 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK 673
            MEY TV+ + GPL+I+  VKG  Y E+V I    G  R+GQVLE   + A+VQVFEGT  +D K T V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++   E+
Sbjct:    4 MEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQ 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_PYRKO (V-type ATP synthase beta chain OS=Pyrococcus kodakaraensis GN=atpB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.750e-51
Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 2
Query:  152 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK 673
            MEY TV+ + GPL+I+  VKG  Y E+V I    G  R+GQVLE   + A+VQVFEGT  +D K T V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++   E+
Sbjct:    6 MEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQ 179          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_PYRHO (V-type ATP synthase beta chain OS=Pyrococcus horikoshii GN=atpB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.750e-51
Identity = 96/170 (56.47%), Postives = 126/170 (74.12%), Query Frame = 2
Query:  140 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            ++++ EY T++ + GPL+I++ VKG  Y E+V I    G  R+GQVL+     A+VQVFEGT  +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA
Sbjct:    2 MKMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENMAIVQVFEGTRDLDIKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQA 171          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_THEGJ (V-type ATP synthase beta chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpB PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.592e-51
Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 2
Query:  152 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK 673
            MEY TV+ + GPL+I++ VKG  Y E+V I    G  R+GQVLE     A+VQVFEGT  +D K T V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++   E+
Sbjct:    4 MEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQ 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_METMA (V-type ATP synthase beta chain OS=Methanosarcina mazei GN=atpB PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.592e-51
Identity = 99/170 (58.24%), Postives = 131/170 (77.06%), Query Frame = 2
Query:  146 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGL 655
            +A EY+T+T +AGPL+ ++K +   Y EIVNI++GDGT+RRGQVL+   +  VVQVFEGT G+D K   V FTGE LK P S+D+LGRI +GSG+P D GP I+P+  LDI+G+++NP  R  P++ IQTGISTID  N++ RGQK+P+FSA+GLPHNEIA QI RQA +
Sbjct:    1 MAKEYKTITQIAGPLIFVEKTEPVGYNEIVNIKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLD-KDCGVIFTGETLKLPASVDLLGRILSGSGEPRDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQASV 169          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_THEON (V-type ATP synthase beta chain OS=Thermococcus onnurineus (strain NA1) GN=atpB PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.691e-51
Identity = 98/174 (56.32%), Postives = 125/174 (71.84%), Query Frame = 2
Query:  152 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK 673
            MEY TV+ + GPL+I+  VKG  Y E+V I    G  R+GQVLE   + A+VQVFEGT  +D K T V+FTGE LK PVS+DMLGR+FNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTG+S ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++   E+
Sbjct:    6 MEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEARQDMAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRVFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGVSAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQ 179          
The following BLAST results are available for this feature:
BLAST of FC931138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
VATB_STRP43.248e-5257.06V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_PYRAB1.234e-5157.06V-type ATP synthase beta chain OS=Pyrococcus abyss... [more]
VATB_METST2.106e-5157.14V-type ATP synthase beta chain OS=Methanosphaera s... [more]
VATB_DESSY2.106e-5157.47V-type ATP synthase beta chain OS=Desulfurococcus ... [more]
VATB_THESI2.750e-5157.47V-type ATP synthase beta chain OS=Thermococcus sp.... [more]
VATB_PYRKO2.750e-5157.47V-type ATP synthase beta chain OS=Pyrococcus kodak... [more]
VATB_PYRHO2.750e-5156.47V-type ATP synthase beta chain OS=Pyrococcus horik... [more]
VATB_THEGJ3.592e-5157.47V-type ATP synthase beta chain OS=Thermococcus gam... [more]
VATB_METMA3.592e-5158.24V-type ATP synthase beta chain OS=Methanosarcina m... [more]
VATB_THEON4.691e-5156.32V-type ATP synthase beta chain OS=Thermococcus onn... [more]

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Properties
Property NameValue
Genbank descriptionC34101H05EF PostHarvP1 Citrus clementina cDNA clone C34101H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931138 ID=FC931138; Name=FC931138; organism=Citrus clementina; type=EST; length=686bp
GCATCTCTCATTGCCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCA
CTCACAGAGATCACAAGAAAGACCAAAAAAAAAGAAAAAAATTGAAAATG
GGTGTGGCACAAAACAATGTTGACATGGAGGAGGGTACTCTGGAAGTCGC
CATGGAGTACAGAACGGTCACCGGAGTTGCTGGGCCTCTAGTTATCCTTG
ATAAAGTCAAGGGACCCAAATATTATGAGATTGTCAATATTCGGTTGGGA
GATGGAACAATGCGACGTGGTCAGGTCCTAGAAGTTGATGGAGAGAAAGC
TGTTGTTCAGGTCTTTGAAGGGACATCCGGAATTGACAATAAATTTACAA
CTGTGCAGTTTACAGGGGAGGTTCTGAAGACTCCTGTCTCATTGGATATG
CTTGGGCGCATTTTTAATGGTTCTGGGAAACCCATTGATAATGGTCCCCC
AATTTTGCCAGAGGCTTACTTGGATATATCCGGAAGTTCTATCAACCCTA
GTGAGAGAACCTATCCTGAAGAGATGATACAGACAGGGATTTCTACCATT
GATGTGATGAACTCCATTGCTAGAGGACAAAAGATCCCTCTTTTTTCTGC
TGCCGGTCTTCCCCATAATGAAATTGCTGCTCAGATTTGTCGCCAGGCTG
GTTTAGTCAAGCGATTGGAGAAGACTGATAATCTTC
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