FC931139

Overview
NameFC931139
Unique NameFC931139
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_BRUO2 (Aspartate carbamoyltransferase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 3 
Query:  135 DILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLL 620
            D+ +    V+R+ EK +       +L+G     LF+E STRT+ SFE A KRLG +V+        S   KGETL DT  T+     DI+V+RH  +GAA   A      V+NAGDG  +HPTQALLD  TI R  G+++ + V + GD+ + R  RS   LL
Sbjct:   31 DLADQEIAVSRQPEKKKS------VLRGRTQINLFFEASTRTQSSFELAGKRLGADVMNMSVGN--SSVKKGETLIDTAMTLNAMQPDILVIRHASAGAAALLAQKVGCSVVNAGDGAHEHPTQALLDALTIRRAKGQIENLIVAICGDVLHSRVARSNILLL 185
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_BRUME (Aspartate carbamoyltransferase OS=Brucella melitensis GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 3 
Query:  135 DILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLL 620
            D+ +    V+R+ EK +       +L+G     LF+E STRT+ SFE A KRLG +V+        S   KGETL DT  T+     DI+V+RH  +GAA   A      V+NAGDG  +HPTQALLD  TI R  G+++ + V + GD+ + R  RS   LL
Sbjct:   31 DLADQEIAVSRQPEKKKS------VLRGRTQINLFFEASTRTQSSFELAGKRLGADVMNMSVGN--SSVKKGETLIDTAMTLNAMQPDILVIRHASAGAAALLAQKVGCSVVNAGDGAHEHPTQALLDALTIRRAKGQIENLIVAICGDVLHSRVARSNILLL 185
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_BRUMB (Aspartate carbamoyltransferase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 3 
Query:  135 DILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLL 620
            D+ +    V+R+ EK +       +L+G     LF+E STRT+ SFE A KRLG +V+        S   KGETL DT  T+     DI+V+RH  +GAA   A      V+NAGDG  +HPTQALLD  TI R  G+++ + V + GD+ + R  RS   LL
Sbjct:   31 DLADQEIAVSRQPEKKKS------VLRGRTQINLFFEASTRTQSSFELAGKRLGADVMNMSVGN--SSVKKGETLIDTAMTLNAMQPDILVIRHASAGAAALLAQKVGCSVVNAGDGAHEHPTQALLDALTIRRAKGQIENLIVAICGDVLHSRVARSNILLL 185
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_BRUAB (Aspartate carbamoyltransferase OS=Brucella abortus GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 3 
Query:  135 DILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLL 620
            D+ +    V+R+ EK +       +L+G     LF+E STRT+ SFE A KRLG +V+        S   KGETL DT  T+     DI+V+RH  +GAA   A      V+NAGDG  +HPTQALLD  TI R  G+++ + V + GD+ + R  RS   LL
Sbjct:   31 DLADQEIAVSRQPEKKKS------VLRGRTQINLFFEASTRTQSSFELAGKRLGADVMNMSVGN--SSVKKGETLIDTAMTLNAMQPDILVIRHASAGAAALLAQKVGCSVVNAGDGAHEHPTQALLDALTIRRAKGQIENLIVAICGDVLHSRVARSNILLL 185
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_BRUA2 (Aspartate carbamoyltransferase OS=Brucella abortus (strain 2308) GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 3 
Query:  135 DILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLL 620
            D+ +    V+R+ EK +       +L+G     LF+E STRT+ SFE A KRLG +V+        S   KGETL DT  T+     DI+V+RH  +GAA   A      V+NAGDG  +HPTQALLD  TI R  G+++ + V + GD+ + R  RS   LL
Sbjct:   31 DLADQEIAVSRQPEKKKS------VLRGRTQINLFFEASTRTQSSFELAGKRLGADVMNMSVGN--SSVKKGETLIDTAMTLNAMQPDILVIRHASAGAAALLAQKVGCSVVNAGDGAHEHPTQALLDALTIRRAKGQIENLIVAICGDVLHSRVARSNILLL 185
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_BRUA1 (Aspartate carbamoyltransferase OS=Brucella abortus (strain S19) GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 3 
Query:  135 DILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLL 620
            D+ +    V+R+ EK +       +L+G     LF+E STRT+ SFE A KRLG +V+        S   KGETL DT  T+     DI+V+RH  +GAA   A      V+NAGDG  +HPTQALLD  TI R  G+++ + V + GD+ + R  RS   LL
Sbjct:   31 DLADQEIAVSRQPEKKKS------VLRGRTQINLFFEASTRTQSSFELAGKRLGADVMNMSVGN--SSVKKGETLIDTAMTLNAMQPDILVIRHASAGAAALLAQKVGCSVVNAGDGAHEHPTQALLDALTIRRAKGQIENLIVAICGDVLHSRVARSNILLL 185
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_BACSK (Aspartate carbamoyltransferase OS=Bacillus clausii (strain KSM-K16) GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 62/135 (45.93%), Postives = 85/135 (62.96%), Query Frame = 3 
Query:  225 MATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGY-SDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAK 626
            +A LF+EPSTRTR SFE A +RLG EVL  +   + +   KGE+L DT RT+E   +  +V+RH +          +V P+INAGDG G HPTQ+LLD+ TI++E     G+ V + GDLA+ R  RS A +L +
Sbjct:   49 VANLFFEPSTRTRFSFEVAERRLGLEVLQFDG--QHASTQKGESLYDTARTLESIGASALVIRHRQDAYFHELKGLSV-PIINAGDGCGNHPTQSLLDLLTIKQEFSSFSGLHVVIAGDLAHSRVARSNADILTR 180
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_UNCTG (Aspartate carbamoyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = 3 
Query:  210 LKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLT-TENAREFSFAAKGETLEDTIRTVEGY-SDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAK 626
            L G  + TLFYEPSTRTR SFE A KRL  +V+  T N    S   KGE+L DT +T+E   +D +++RH  +GA    A      +INAGDG  +HPTQ LLD+YT+  +  K++G+KV LVGD+ + R  +S  + L K
Sbjct:   43 LVGKTVVTLFYEPSTRTRNSFEIAAKRLSADVVNVTVNT---SSIVKGESLIDTGKTLEAMKADYLIIRHSLAGAPDILARNLNASIINAGDGFHEHPTQGLLDLYTMYEKKKKIEGLKVLLVGDILHSRVAKSNIWALIK 180
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_SYNAS (Aspartate carbamoyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=pyrB PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 68/181 (37.57%), Postives = 98/181 (54.14%), Query Frame = 3 
Query:   90 KFQLDDVIEAQQFDRDILNAIFEVARE-MEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAK 626
            K++  D++  +    + ++ I + A   +E   ++      L+G  +   F E STRTR SFE A KRL  + +    +   S   KGETL DT R +E  + D+IV+RH  +GA    A      +INAGDG  +HP+QALLD+ TI    G L G+ V +VGD+A+ R  RS  Y L K
Sbjct:    2 KWERKDILGMKDLSVEEIHMILDTAESFLEVSARDIKKVPTLRGKTIINFFVEASTRTRTSFEIAGKRLSADTINISASA--SSLVKGETLADTARNLEAMNPDVIVIRHSCAGAPHMLAGLVRQSIINAGDGAHEHPSQALLDMMTIRNRKGGLSGLNVTIVGDIAHSRVARSNIYGLNK 180
[Close]
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_SPHWW (Aspartate carbamoyltransferase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=pyrB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 62/133 (46.62%), Postives = 80/133 (60.15%), Query Frame = 3 
Query:  210 LKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGY-SDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRS 605
            L G  +   F+E STRT LSFE A KRLG +V+  +     S   KGETL DT  T+    +D+IV+RH  SGA +  A     PV+NAGDG  +HPTQALLD  TI R  G++ G+ V + GD+ + R  RS
Sbjct:   45 LAGLTLINAFFENSTRTLLSFEIAGKRLGADVVNMQVGA--SSVKKGETLIDTAMTLNAMRADMIVIRHQSSGAVQLIADKVDCPVLNAGDGRHEHPTQALLDALTIRRRKGRIAGLVVAICGDILHSRVARS 175
The following BLAST results are available for this feature:
BLAST of FC931139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRB_BRUO26.997e-2341.10Aspartate carbamoyltransferase OS=Brucella ovis (s... [more]
PYRB_BRUME6.997e-2341.10Aspartate carbamoyltransferase OS=Brucella meliten... [more]
PYRB_BRUMB6.997e-2341.10Aspartate carbamoyltransferase OS=Brucella meliten... [more]
PYRB_BRUAB6.997e-2341.10Aspartate carbamoyltransferase OS=Brucella abortus... [more]
PYRB_BRUA26.997e-2341.10Aspartate carbamoyltransferase OS=Brucella abortus... [more]
PYRB_BRUA16.997e-2341.10Aspartate carbamoyltransferase OS=Brucella abortus... [more]
PYRB_BACSK6.997e-2345.93Aspartate carbamoyltransferase OS=Bacillus clausii... [more]
PYRB_UNCTG9.138e-2346.10Aspartate carbamoyltransferase OS=Uncultured termi... [more]
PYRB_SYNAS9.138e-2337.57Aspartate carbamoyltransferase OS=Syntrophus acidi... [more]
PYRB_SPHWW9.138e-2346.62Aspartate carbamoyltransferase OS=Sphingomonas wit... [more]

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Properties
Property NameValue
Genbank descriptionC34101H07EF PostHarvP1 Citrus clementina cDNA clone C34101H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931139 ID=FC931139; Name=FC931139; organism=Citrus clementina; type=EST; length=685bp
GGAAGCAGACCCAGCAGTTGCCCTCAAGGAATTCAATCCAGTGCTGGGCA
ATAGAAACTCAAAGTACCCCCTCATTTACCATCGGGAAGAAGTTTCAACT
TGATGACGTGATTGAAGCACAACAGTTTGATAGAGACATTCTTAATGCTA
TATTTGAAGTTGCGCGTGAAATGGAGAAGATAGAAAAGAATTCACCTGGA
AGCCAAATTCTTAAAGGTTACCTAATGGCTACTCTGTTTTATGAGCCCTC
TACTAGAACTAGGCTTTCATTTGAGTCTGCTATGAAGCGGTTAGGTGGGG
AAGTTTTGACTACAGAAAATGCTAGGGAATTTTCATTTGCAGCAAAGGGG
GAGACACTGGAAGACACTATAAGGACTGTTGAGGGGTACTCTGATATAAT
AGTTATGCGGCATTTTGAAAGCGGAGCTGCCAGAAGAGCTGCAACAACAG
CTGTCATTCCTGTCATAAATGCTGGAGATGGTCCTGGACAGCATCCAACT
CAGGCTCTTTTAGATGTCTATACTATTGAAAGAGAGATAGGCAAGCTGGA
TGGCATTAAAGTTGGGCTTGTGGGAGATCTAGCTAATGGAAGAACAGTCC
GCTCGCTTGCTTACTTGCTTGCCAAATACCAAGATGTGAAGATCTACTTT
GTCTCTCCTGGTGTAGTAAAATGAAGGATGATATC
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