FC931139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_PSEAB (Aspartate carbamoyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pyrB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22 Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 3 Query: 96 QLDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGS-QILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAA--TTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRS 605 QL I R++L I + A ++ + +L+G + +F+E STRTR +FE A +RL +V++ + S +KGETL DT+R +E + D+ V+RH +SGAA A + + VIN GDG HPTQ +LD+ TI R G + + V +VGD+ + R RS Sbjct: 16 QLRHFISLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISLNVST--SSTSKGETLTDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVSPNVAVINGGDGRHAHPTQGMLDMLTIRRHKGNFEQLSVAIVGDILHSRVARS 187
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_PSEA8 (Aspartate carbamoyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=pyrB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22 Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 3 Query: 96 QLDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGS-QILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAA--TTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRS 605 QL I R++L I + A ++ + +L+G + +F+E STRTR +FE A +RL +V++ + S +KGETL DT+R +E + D+ V+RH +SGAA A + + VIN GDG HPTQ +LD+ TI R G + + V +VGD+ + R RS Sbjct: 16 QLRHFISLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISLNVST--SSTSKGETLTDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVSPNVAVINGGDGRHAHPTQGMLDMLTIRRHKGNFEQLSVAIVGDILHSRVARS 187
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_PSEA7 (Aspartate carbamoyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=pyrB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22 Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 3 Query: 96 QLDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGS-QILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAA--TTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRS 605 QL I R++L I + A ++ + +L+G + +F+E STRTR +FE A +RL +V++ + S +KGETL DT+R +E + D+ V+RH +SGAA A + + VIN GDG HPTQ +LD+ TI R G + + V +VGD+ + R RS Sbjct: 16 QLRHFISLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISLNVST--SSTSKGETLTDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVSPNVAVINGGDGRHAHPTQGMLDMLTIRRHKGNFEQLSVAIVGDILHSRVARS 187
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_OCEIH (Aspartate carbamoyltransferase OS=Oceanobacillus iheyensis GN=pyrB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22 Identity = 71/193 (36.79%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 111 IEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGY-SDIIVMRH--------FESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPG 662 I Q + D + I A E+ N Q+ G LF+EPSTRT++SF A ++LG E+L E S AKGE+L DT +T E ++ +V+RH E G IPVINAG G +HPTQ LLD+ T+ +E G + G+KV + GD+ + R +S A L K I+ +PG Sbjct: 5 ISVNQLEADEMYQIIRKANELRD-RPNQLNRQLFAG----NLFFEPSTRTKMSFSVAERKLGVEILDFHT--EASSLAKGESLYDTAKTFEAIGANFLVIRHPSDQWISELEQGGKLN------IPVINAGSGKEEHPTQCLLDLLTMYQEFGSIKGLKVVIAGDIKHSRVAKSNAMALTKLGAKVIFSAAPG 184
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_MYCS2 (Aspartate carbamoyltransferase OS=Mycobacterium smegmatis GN=pyrB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22 Identity = 72/193 (37.31%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEK--IEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGY-SDIIVMRHFESGAARRAATTAVIP------VINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 ++ A RD AI + A + + + L+G + T+FYE STRTR+SFE A K + +V+ + S AKGE+L DT T+ +D +++RH SGAA++ A V VINAGDG +HPTQALLD TI + +G ++G +V +VGD+ + R RS LL ++ VSP Sbjct: 6 LLSAGDLTRDDATAILDDADRFREALLGREVKKLPTLRGRTIITMFYENSTRTRVSFEVAGKWMSADVINVSASG--SSVAKGESLRDTALTLRAAGADALIIRHPASGAAQQLAEWTVEEDGGGPSVINAGDGTHEHPTQALLDALTIRQRLGSVEGKRVVIVGDVLHSRVARSNVTLLHTL-GAEVVLVSP 195
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_RHOSR (Aspartate carbamoyltransferase OS=Rhodococcus sp. (strain RHA1) GN=pyrB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22 Identity = 64/168 (38.10%), Postives = 98/168 (58.33%), Query Frame = 3 Query: 156 EVAREMEKIEKNSPGSQI-----LKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGY-SDIIVMRHFESGAARRAAT------TAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLA 623 E+ E E+ E+ G ++ L+G + T+F+E STRTR+SFE A K + +V+ + S +KGE+L DT T+ +D +++RH SGAA + A VINAGDG +HPTQALLD T+ + +G ++G ++ +VGD+ + R RS A LL+ Sbjct: 17 ELLDEAERFEQALLGREVRKLPTLRGRTVMTVFFENSTRTRVSFEVAGKWMSADVINVSASS--SSVSKGESLRDTAMTLRAAGADALIVRHPASGAAHQIAKWTGHQDDGGPAVINAGDGTHEHPTQALLDALTLRQRLGDIEGKRIAIVGDILHSRVARSNALLLS 182
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_THIDA (Aspartate carbamoyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=pyrB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21 Identity = 66/180 (36.67%), Postives = 97/180 (53.89%), Query Frame = 3 Query: 132 RDILNAIFEVARE-MEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEG-YSDIIVMRHFESGAARRAATTAV--IPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 R L I + A M+ E+ +L+G + LF+EPSTRTR +FE A KRL +V+ A S KGE + DT+ + ++D+ ++RH +SGAA A I V+NAGDG HPTQ LLD++TI R G+ + V +VGD+ + R RS + L ++ + P Sbjct: 22 RATLTHILDTAESFMDVGEREVKKVPLLRGKSIFNLFFEPSTRTRTTFEIAAKRLSADVVNLNIAT--SSQTKGEAILDTVDNLSAMHADMFIVRHSQSGAAHFIARHVAPHISVVNAGDGRHAHPTQGLLDMFTIRRFKGEFHNLTVAIVGDVLHSRVARSQIHALTTLGVPEVRVIGP 199
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_PSEU2 (Aspartate carbamoyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pyrB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21 Identity = 63/174 (36.21%), Postives = 96/174 (55.17%), Query Frame = 3 Query: 96 QLDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGS-QILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAV--IPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRS 605 QL + R++L I + A ++ + +L+G + +F+E STRTR +FE A +RL +V+T + S +KGETL DT+R +E + D+ V+RH +SGAA A + +IN GDG HPTQ +LD+ TI R G + + V +VGD+ + R RS Sbjct: 17 QLRHFLSLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVITLNVST--SSTSKGETLFDTLRNLEAMAADMFVVRHADSGAAHFIAEHVCPDVAIINGGDGRHAHPTQGMLDMLTIRRHKGGFENLSVAIVGDILHSRVARS 188
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_PSESM (Aspartate carbamoyltransferase OS=Pseudomonas syringae pv. tomato GN=pyrB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21 Identity = 63/174 (36.21%), Postives = 96/174 (55.17%), Query Frame = 3 Query: 96 QLDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGS-QILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAV--IPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRS 605 QL + R++L I + A ++ + +L+G + +F+E STRTR +FE A +RL +V+T + S +KGETL DT+R +E + D+ V+RH +SGAA A + +IN GDG HPTQ +LD+ TI R G + + V +VGD+ + R RS Sbjct: 17 QLRHFLSLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVITLNVST--SSTSKGETLFDTLRNLEAMAADMFVVRHADSGAAHFIAEHVCPDVAIINGGDGRHAHPTQGMLDMLTIRRHKGGFENLSVAIVGDILHSRVARS 188
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_PSE14 (Aspartate carbamoyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pyrB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21 Identity = 63/174 (36.21%), Postives = 96/174 (55.17%), Query Frame = 3 Query: 96 QLDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGS-QILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYS-DIIVMRHFESGAARRAATTAV--IPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRS 605 QL + R++L I + A ++ + +L+G + +F+E STRTR +FE A +RL +V+T + S +KGETL DT+R +E + D+ V+RH +SGAA A + +IN GDG HPTQ +LD+ TI R G + + V +VGD+ + R RS Sbjct: 17 QLRHFLSLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVITLNVST--SSTSKGETLFDTLRNLEAMAADMFVVRHADSGAAHFIAEHVCPDVAIINGGDGRHAHPTQGMLDMLTIRRHKGGFENLSVAIVGDILHSRVARS 188 The following BLAST results are available for this feature:
BLAST of FC931139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931139 ID=FC931139; Name=FC931139; organism=Citrus clementina; type=EST; length=685bpback to top |