FC931139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYR1_HUMAN (CAD protein OS=Homo sapiens GN=CAD PE=1 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 2.828e-40 Identity = 86/184 (46.74%), Postives = 125/184 (67.93%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 ++ QQF +D ++ +F VA + + + ILKG +MA++FYE STRT SF +AM RLGG VL+ A S KGE+L D+++T+ Y+D++V+RH + GA AA PVINAGDG G+HPTQALLD++TI E+G ++G+ + +VGDL +GRTV SLA LL +Y+ V + +V+P Sbjct: 1926 ILSVQQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVLSFSEAT--SSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYR-VSLRYVAP 2106
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_VIBFM (Aspartate carbamoyltransferase OS=Vibrio fischeri (strain MJ11) GN=pyrB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.299e-40 Identity = 88/188 (46.81%), Postives = 121/188 (64.36%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAV-IPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVV 668 +I + R L I E A +++K P +LK ++A+ F+E STRTRLSFE+A++RLGG V+ + A S A KGETL D+++ + Y+D VMRH + GAAR A+ + PVINAGDG QHPTQ LLD+YTI G+LD + V VGDL GRTV SL LAK++ +K +F++P V+ Sbjct: 10 IISIPELSRQELELIVETAGKIKK----EPQPDLLKNKIVASCFFEASTRTRLSFETAIQRLGGSVIGFDTAGNTSLAQKGETLADSVQIITSYADAYVMRHPQEGAARLASEFSNGTPVINAGDGANQHPTQTLLDLYTIYETQGRLDNLNVAFVGDLKYGRTVHSLTQALAKFEGIKFFFIAPEVL 193
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_VIBF1 (Aspartate carbamoyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pyrB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.299e-40 Identity = 88/188 (46.81%), Postives = 121/188 (64.36%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAV-IPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVV 668 +I + R L I E A +++K P +LK ++A+ F+E STRTRLSFE+A++RLGG V+ + A S A KGETL D+++ + Y+D VMRH + GAAR A+ + PVINAGDG QHPTQ LLD+YTI G+LD + V VGDL GRTV SL LAK++ +K +F++P V+ Sbjct: 10 IISIPELSRQELELIVETAGKIKK----EPQPDLLKNKIVASCFFEASTRTRLSFETAIQRLGGSVIGFDTAGNTSLAQKGETLADSVQIITSYADAYVMRHPQEGAARLASEFSNGTPVINAGDGANQHPTQTLLDLYTIYETQGRLDNLNVAFVGDLKYGRTVHSLTQALAKFEGIKFFFIAPEVL 193
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_PROMH (Aspartate carbamoyltransferase OS=Proteus mirabilis (strain HI4320) GN=pyrB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.227e-40 Identity = 89/188 (47.34%), Postives = 122/188 (64.89%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAV-IPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVV 668 +I +RD L ++ VA ++ K P SQ+LK ++A+ F+E STRTRLSFE+A+ RLG V+ + S KGETL DTI + Y+D IV+RH + GAAR A+ A IPVINAGDG QHP+Q LLD++TI+ G+LD + + +VGDL GRTV SLA LAK+ +YF++P V+ Sbjct: 10 IISINDLNRDDLESVLHVADKL----KQHPNSQLLKDKVIASCFFEASTRTRLSFETAIHRLGASVVGFADGSNTSLGKKGETLADTISVLRTYADAIVIRHPQEGAARLASEFAGDIPVINAGDGANQHPSQTLLDLFTIKETQGRLDNLNIAMVGDLKYGRTVHSLAQALAKFTGNHLYFIAPKVL 193
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYR1_MESAU (CAD protein OS=Mesocricetus auratus GN=CAD PE=1 SV=4) HSP 1 Score: 163.696 bits (413), Expect = 8.227e-40 Identity = 85/184 (46.20%), Postives = 125/184 (67.93%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 ++ +QF +D ++ +F VA + + + ILKG +MA++FYE STRT SF +AM RLGG VL+ A S KGE+L D+++T+ Y+D++V+RH + GA AA PVINAGDG G+HPTQALLD++TI E+G ++G+ + +VGDL +GRTV SLA LL +Y+ V + +V+P Sbjct: 1926 ILSVKQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVLSFSEAT--SSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYR-VSLRYVAP 2106
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_SACD2 (Aspartate carbamoyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=pyrB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.074e-39 Identity = 84/194 (43.30%), Postives = 123/194 (63.40%), Query Frame = 3 Query: 90 KFQLDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREI----GKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 KF ++ +QF+R + IF VA ME +++L+G ++ +F+EPSTRTR+SF A LGGEV T + S AKGE+L DT R + GYSD+I MRH + G+ A + +PVIN GDG +HP+QALLD+YTI++E+ LDG+++ ++GDL +GRTV SL LL + ++++ VSP Sbjct: 2 KFSGSHILSVEQFERADIERIFAVADSMEPYALRQKVTRVLEGAILGNMFFEPSTRTRVSFGCAFNLLGGEVRETTGFKS-SAIAKGESLYDTARVLSGYSDVICMRHPQEGSVAEFAQASRVPVINGGDGANEHPSQALLDLYTIQKELRDKGRSLDGLRIAMIGDLKHGRTVHSLMRLLGLFANLQVVLVSP 194
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_METLZ (Aspartate carbamoyltransferase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pyrB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.074e-39 Identity = 83/150 (55.33%), Postives = 110/150 (73.33%), Query Frame = 3 Query: 210 LKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 L+G ++A LF+EPSTRTR+SF +AM RLGG++L + S KGETL DTIR + GY D IV+RH + GAAR A+ A +PVIN GDG GQHP+Q LLD++TI RE +++ I VGL GDL GRTV SLA+ LAKY +V+++ ++P Sbjct: 39 LEGKILAVLFFEPSTRTRMSFSAAMMRLGGKILNLGSVEATSIT-KGETLSDTIRVISGYCDAIVLRHPKEGAARLASEVASVPVINGGDGAGQHPSQTLLDLFTI-RESMRIENIDVGLQGDLRYGRTVHSLAFALAKYNNVRLHTIAP 186
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_METHJ (Aspartate carbamoyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pyrB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.074e-39 Identity = 90/187 (48.13%), Postives = 121/187 (64.71%), Query Frame = 3 Query: 99 LDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 ++ +I DRD ++ + A E + G + LKG ++ LF+EPSTRTR+SFESAM RLGG + E S AKGETL DTIR V GY+D IV+RH + GAAR A+ + IP++N GDG GQHP+Q L+D+YTI R+ LD I +GL+GDL GRT SLAY L Y + +I+ ++P Sbjct: 1 MNHIISIHDLDRDQIDRLLARAGE---VTAEFAGKEPLKGKILGLLFFEPSTRTRMSFESAMLRLGGSCMNLGGV-EVSSMAKGETLADTIRVVSGYADAIVLRHPKVGAARLASEFSEIPILNGGDGAGQHPSQTLIDLYTI-RQSMSLDNIHIGLIGDLMYGRTTHSLAYALTHY-NARIHTIAP 181
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_CLONN (Aspartate carbamoyltransferase OS=Clostridium novyi (strain NT) GN=pyrB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.074e-39 Identity = 90/189 (47.62%), Postives = 124/189 (65.61%), Query Frame = 3 Query: 105 DVIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVVK 671 ++I+ F + L +F +A ++ IE S++ +G L+ATLFYEPSTRTRLSFE+AM RLGG+VL +A S +KGE+LEDTI+ V GY+D+I +RH + GAA A+ + +P+INAGDG QHPTQ L D+ TI R G +GL GDL GRTV SL L++Y++ K +SP +K Sbjct: 6 NLIDPMDFSVEELEEVFSLADKI--IENPKKYSKVCEGKLLATLFYEPSTRTRLSFEAAMLRLGGKVLGFSDAN-CSSVSKGESLEDTIKIVSGYTDVIAIRHPKEGAAEVASKHSYVPIINAGDGGHQHPTQTLTDLLTIRRIKGDFSNHTIGLCGDLKFGRTVHSLVKALSRYENNKFILISPKELK 191
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_VIBVU (Aspartate carbamoyltransferase OS=Vibrio vulnificus GN=pyrB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.403e-39 Identity = 83/185 (44.86%), Postives = 121/185 (65.41%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAAT-TAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 +I + R L I + A ++ K P +++K ++A+ F+EPSTRTRLSFE+A++R+GG+V+ ++ S A KGETL D+++ + Y D VMRH + GAAR A+ + +PVINAGDG QHPTQ LLD++TI G+LD + V VGDL GRTV SL LAK+ +++ +FV+P Sbjct: 10 IISIPELSRAELELIVKTAGQL----KAEPNPELIKNKVVASCFFEPSTRTRLSFETAIQRIGGDVIGFDDGGNTSLAKKGETLSDSVQVISNYVDAFVMRHPQEGAARLASEFSNGVPVINAGDGANQHPTQTLLDLFTISETQGRLDNLNVAFVGDLKYGRTVHSLTQALAKFNNIRFFFVAP 190 The following BLAST results are available for this feature:
BLAST of FC931139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931139 ID=FC931139; Name=FC931139; organism=Citrus clementina; type=EST; length=685bpback to top |