FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: MECR1_CAEEL (Probable trans-2-enoyl-CoA reductase 1, mitochondrial OS=Caenorhabditis elegans GN=W09H1.5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 65/212 (30.66%), Postives = 100/212 (47.17%), Query Frame = 3
Query:   51 PEVLQLQEVE-DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 668
            PE +QL+ V    +   D+VL++  A  +N AD  Q +G YP         G E  G ++SVG NVS  KVGD V     G G + E        + P+ + +S++ AA F     T +  +     L  G++   +G +S +G   IQ+ +  G++      S    EE +   KDLGAD  I    E+  +R K+     GV + L+C+G
Sbjct:   29 PEAIQLKTVTIADKPSADQVLVQWIAAPINPADLNQIQGVYPVKPALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLSMEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQICRILGIKTVNVVRSRDNLEELVKELKDLGADEVIT--QEELYSRKKK---FPGVKLALNCVG 235          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: FAS_CHICK (Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 60/207 (28.99%), Postives = 91/207 (43.96%), Query Frame = 3
Query:  108 LIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGR 716
            L KV   +LN  D +   G   P      +   +C   +   G++++    G +V  LL   G A  V      +  VP   +L++AA+ P V  T +  + +   +  GES L+H GS G+G  AI +    G RVF T GS EK     A    L A+   + +   F   +   T GKGV ++L+ +     Q +L  L   GR
Sbjct: 1567 LCKVYYASLNFWDIMLATGKLSPDAIPGNWTLQQCMLGMEFSGRDLA----GRRVMGLLPAKGLATVVDCDKRFLWEVPENWTLEEAASVPVVYATAYYALVVRGGMKKGESVLIHSGSGGVGQAAIAIALSMGCRVFATVGSAEKREYLQARFPQLDANSFASSRNTTFQQHILRVTNGKGVSLVLNSLAEEKLQASLRCLAQHGR 1769          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 67/263 (25.48%), Postives = 115/263 (43.73%), Query Frame = 3
Query:   24 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQ----------------------VCALLGGGGYA------EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEET-GGKGVD-VILDCMGASYFQRNLDSLNIDGRL 719
            A V  + G P  L  +++  P+   D++L+K+  + +   D     G +P P       G E +G +++ G+ V  +++GDQ                      +CA     GY       +     A     +P+GV L  AA       TV+  +   + + PG++  + G   G+G+ A Q  K  G+RV    G +EK A+C+ LG +  +++ K++D VA VK  T  G G   VIL  +    FQ+  + +   G +
Sbjct:    9 AQVAEKVGGP--LVYKQIPVPKPGPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQLSGYTVDGTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGL-KEAGVRPGQTVAIVGAGGGLGSLAQQYAKAMGIRVVAVDGGDEKRAMCESLGTETYVDFTKSKDLVADVKAATPDGLGAHAVILLAVSEKPFQQATEYVRSRGTI 268          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZDH1_STAEQ (Zinc-type alcohol dehydrogenase-like protein SERP1785 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1785 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 56/199 (28.14%), Postives = 96/199 (48.24%), Query Frame = 3
Query:   84 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 653
            P     E+L+KV++ ++N  DT QR     P   A    G +  G I  +G  VS ++ GD V    +    G   E   +    V   P+ +  + AA+ P    T + T+F    +S       G+S L+  G+ G+G+ A Q+ K  G++V  TA  E+ +    ++GADV +N+K +  +++  ++   +GVD I
Sbjct:   26 PHPSGHELLVKVQSISVNPVDTKQRT---MPVDKAPRVLGFDAVGVIEKIGDQVSMFQEGDVVFYSGSPNQNGSNEEYQLIEEYLVAKAPTNLKSEQAASLPLTGLTAYETLFDVFGISKEPSENKGKSLLIINGAGGVGSIATQIAKFYGLKVITTASREDTIKWSVNMGADVVLNHKKD--LSQQFKDNHIEGVDYI 219          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: QORL1_MOUSE (Quinone oxidoreductase-like protein 1 OS=Mus musculus GN=Cryzl1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 67/225 (29.78%), Postives = 105/225 (46.67%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQL--QEVED-PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK----EETGGKGVDVILD 659
            MK +   Q  + E +    QE E+ P  +D+ V ++V+A AL+  +T +        K   P  G E SG +L VG+ V+ ++  D+V  +L       G  E + V    ++  P  VS  +AA          + ++  S LSPG+S L+  G+S  GT AIQ+   +G +V  TA S E     + L   +       +    V     EETGG GVD+++D
Sbjct:    1 MKGLYFQQSSTNEEVTFVFQEKENVPVTEDNFVRVQVKACALSHINT-KLLAEMKMEKDFFPV-GREVSGIVLEVGRKVTFFQPDDEVVGILPLDSEDPGLCEVIRVHEHYLVHKPEKVSWTEAAGVIRDGVRACTALYYLSQLSPGKSVLIMDGASAFGTIAIQLAHHRGAKVISTAHSLEDKQHLERLRPSIARVIDVSNGKVHVAESCLEETGGLGVDIVID 223          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 73/263 (27.76%), Postives = 116/263 (44.11%), Query Frame = 3
Query:   24 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR--WKVGD--------------QVC----------ALLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEET-GGKGVD-VILDCMGASYFQRNLDSLNIDG 713
            A V+ + G+P V +  +V  P+   DE+L+K+  + +   D    KG +P P       G E +G +++ G+ V    +K+GD              ++C          A L G    G + +     A     +P  V L  AA       TV+  +   S   PG++  + G   G+G+ A Q  K  G+R       +EK A+C+ LGA+V I++ K+ D VA VK  T GG G   VIL  +    FQ+  + +   G
Sbjct:    9 AQVVEKAGTPPVYK--QVPVPKPGPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASLSGYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGL-KESGARPGQTVAIVGAGGGLGSLAQQYAKAMGLRTIAIDSGDEKKAMCEQLGAEVFIDFSKSADVVADVKAATPGGLGAHAVILLAVAEKPFQQATEYVRSHG 268          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 62/242 (25.62%), Postives = 104/242 (42.98%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVI 653
            T K ++  +  S   L+ +++  P+ K +E+LI V+ + +   D     G +P P       G E +G ++ +G+NV  WK+GD              + C L          L G    G + +     A Q   +P G  L   A       TV+  +  +++L  G    + G + G+G+ A+Q  K  G RV    G E K  + + +G +V I++ K +D V  V + T G    VI
Sbjct:    6 TQKGVIFYE--SHGKLEHKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVI 244          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: TDH_BACA2 (L-threonine 3-dehydrogenase OS=Bacillus amyloliquefaciens (strain FZB42) GN=tdh PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 71/249 (28.51%), Postives = 112/249 (44.98%), Query Frame = 3
Query:   12 GTMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPYP-GLECSGTILSVGKNVSRWKVGDQVCA------------------------LLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 668
            G MKAIV  +      L+  E+  P I ++EVLIKV+A ++   D  +     +   +  +P   G E SG +   GK+V+  K GD V A                        +LG    G +AE V VPA  V   P+ +     A+  E       TV  +S L+ G + ++  G   IG  A+ + K  G  R+     ++ +LA+ K LGA + I+   ED +  +   TGG+G+D++ +  G
Sbjct:    3 GKMKAIVKNENAFGATLK--EIPIPSINENEVLIKVQAASICGTDVHIYNWDQWAQKRIKTPQVFGHEFSGIVAETGKHVTNVKTGDYVSAETHFVCGTCVPCLTGKHHVCTHTKILGVDTAGSFAEYVKVPARNVWKNPADMD-PAVASVQEPLGNAVHTVLESSQLAGGSAAII--GCGPIGLMAVAVAKAAGASRIAAIDKNDYRLALAKKLGATITISADKEDPLEVIDTLTGGEGIDLVCEMSG 246          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS39_DICDI (Probable polyketide synthase 39 OS=Dictyostelium discoideum GN=pks39 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 65/246 (26.42%), Postives = 115/246 (46.75%), Query Frame = 3
Query:   63 QLQEVEDPQIKDDEVLIKVEATALNRAD----------TLQRKGSYPPPKGA---SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLA-VCKDLGADVCINY--KTEDFVARVKE--------ETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            QL   +D ++  +EV I+++AT +N  D           L+ K       G    +P  G + SG I  +G NV  +KVGDQVC   G    +  + V +  +   P   S   +A+ P +  T   +++   +L   ES L+H  + G+G  ++ + K    QG  +F+T GS++K   +    G+ +   Y  + +++V  +K         E   +GVD+IL+ + + +   N   LN+ GR+
Sbjct: 1930 QLYSKKD-ELNSNEVEIEIKATGINYKDYLLHIGMIGTNLEIKYGKEIENGIGFDNPKIGNDFSGIITRLGCNVKEFKVGDQVCG-FGSKTNSSHIIVDSDSIYYKPLYYSHSVSASIPSIYITSLHSIYGIGNLKSNESILIHSAAGGVGLSSLDLLKSKQHQGY-IFLTVGSKDKEEYLINKYGSLITAIYSSRNKNYVYEIKNKLIELGEVEQHQQGVDLILNTLSSEFMSPNFQCLNLSGRI 2172          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_NEUCR (Alcohol dehydrogenase 1 OS=Neurospora crassa GN=adh-1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 72/263 (27.38%), Postives = 111/263 (42.21%), Query Frame = 3
Query:   24 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQ----------------------VC--ALLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEET-GGKGVD-VILDCMGASYFQRNLDSLNIDGRL 719
            A V+ + G P V +   V+ P    DEVLI V+ + +   D    KG +P         G E +G +++ G+ V+  +VGD                       +C  ALL G    G + +     A  V  +P G  L+  A       TV+  +   S + PG+   + G   G+G+ AIQ     G+      G EEK   C++LGA   +++  T+D VA VK  T  G G   VIL  +    F + +D +   G +
Sbjct:   12 AQVVEKKGGPVVFKQIPVQKPG--PDEVLINVKYSGVCHTDLHAMKGDWPLATKMPLVGGHEGAGVVVAKGELVTEVEVGDHAGIKWLNGSCLACSFCMQADEPLCPHALLSGYTVDGSFQQYAIAKAAHVAKIPKGCDLETTAPVLCAGITVYKGL-KESGVRPGQCVAIVGAGGGLGSMAIQYANAMGLHAIAIDGGEEKGKNCRELGAQAYVDFTTTKDLVADVKAATPDGLGPHAVILLAVSEKPFHQAVDYVRSRGTI 271          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MECR1_CAEEL2.503e-1330.66Probable trans-2-enoyl-CoA reductase 1, mitochondr... [more]
FAS_CHICK2.503e-1328.99Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 ... [more]
ADH1_EMENI2.503e-1325.48Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ZDH1_STAEQ3.269e-1328.14Zinc-type alcohol dehydrogenase-like protein SERP1... [more]
QORL1_MOUSE3.269e-1329.78Quinone oxidoreductase-like protein 1 OS=Mus muscu... [more]
ADH3_EMENI3.269e-1327.76Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH1_YEAST3.269e-1325.62Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
TDH_BACA24.269e-1328.51L-threonine 3-dehydrogenase OS=Bacillus amylolique... [more]
PKS39_DICDI4.269e-1326.42Probable polyketide synthase 39 OS=Dictyostelium d... [more]
ADH1_NEUCR4.269e-1327.38Alcohol dehydrogenase 1 OS=Neurospora crassa GN=ad... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
back to top