FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:92..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZDH1_STAES (Zinc-type alcohol dehydrogenase-like protein SE_1777 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1777 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 55/199 (27.64%), Postives = 95/199 (47.74%), Query Frame = 3
Query:   84 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 653
            P     E+L+KV++ ++N  DT QR     P        G +  G I  +G  VS ++ GD V    +    G   E   +    V   P+ +  + AA+ P    T + T+F    +S       G+S L+  G+ G+G+ A Q+ K  G++V  TA  E+ +    ++GADV +N+K +  +++  ++   +GVD I
Sbjct:   26 PHPSGHELLVKVQSISVNPVDTKQRT---MPVDKVPRVLGFDAVGVIEKIGDQVSMFQEGDVVFYSGSPNQNGSNEEYQLIEEYLVAKAPTNLKSEQAASLPLTGLTAYETLFDVFGISKEPSENKGKSLLIINGAGGVGSIATQIAKFYGLKVITTASREDTIKWSVNMGADVVLNHKKD--LSQQFKDNHIEGVDYI 219          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: YJMD_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjmD OS=Bacillus subtilis GN=yjmD PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 64/229 (27.95%), Postives = 101/229 (44.10%), Query Frame = 3
Query:   72 EVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGD---------------------QVCALLG------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 665
            EV+ P + KDDEVL+KV+   +  +D     G+ P     +  P   G E +G + +VG NV   K GD                      VCA L        GG  E + +P  Q+  V   +  ++A        T+ +       +  G++ L+  G+  IG   ++M K  G  V +T  + E+LA  K+ GAD  +N + E    RV E TG +G +V++D +
Sbjct:   16 EVKKPVLSKDDEVLVKVKRVGICGSDMHIYHGTNP----LATLPRVIGHEVTGQVEAVGANVQSLKPGDHVVIEPISYCGSCYACRKGRPNVCAKLSVFGVHEDGGMREYIVLPERQLHAVSKDLPWEEAVMAEPY--TIGAQAVWRGQVEKGDTVLIQ-GAGPIGICVLKMAKLAGAAVMMTDLNNERLAFAKENGADAVVNVQAEHVAERVLEWTGNEGANVVIDAV 237          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: MECR_DROME (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Drosophila melanogaster GN=CG16935 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 53/184 (28.80%), Postives = 83/184 (45.11%), Query Frame = 3
Query:   21 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 566
            K++  TQ G P EVLQL E + P  KD++VL+K+ A  +N AD    +G YP         G EC   ++ VG  V  ++ G  V  L  G G +         Q+L V   V L +AA       T +  +     L PG++ + +G +S +G    Q+ +  G+          ++A  K +
Sbjct:   24 KSLKYTQHGEPQEVLQLVEDKLPDPKDNQVLVKILAAPINPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVKGFEAGQHVIPLASGLGTWTTHAVYKEDQLLIVSKKVGLAEAATSTVNPTTAYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQLCRAWGINSVGIVRDRPEIAELKQM 207          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: TOXD_COCCA (Protein TOXD OS=Cochliobolus carbonum GN=TOXD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 61/206 (29.61%), Postives = 97/206 (47.09%), Query Frame = 3
Query:   21 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR-WKVGDQVCALLGGGG--------YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS----PGES---FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 590
            KAIV   P    ++  + +  P+++DD +L++  + ALN  D        PP        G + +G +  VG++V + +K GD+VC    GG         +AE + V       +P  +S ++AA       TV   ++ +  LS    P E     L++GGS+  GT AIQ+ K  G RV +T  S     + K LGAD+  +Y
Sbjct:    5 KAIVTEAPHRARLVSDRLI--PKLRDDYILVRTVSVALNPTDWKHILRLSPP----GCLVGCDYAGIVEEVGRSVKKPFKKGDRVCGFAHGGNAVFSDDGTFAEVITVKGDIQAWIPENLSFQEAATLGVGIKTVGQGLYQSLKLSWPTTPIEHAVPILIYGGSTATGTLAIQLAKLSGYRV-ITTCSPHHFELMKSLGADLVFDY 203          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS9_DICDI (Probable polyketide synthase 9/36 OS=Dictyostelium discoideum GN=pks9 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 69/238 (28.99%), Postives = 105/238 (44.12%), Query Frame = 3
Query:   48 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP--GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS--PGESFLVHGGSSGIG--TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--------NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            SP +    + +  +++D++V +K  AT +N  D L   GS       +  P  G E SG I  VG NV  +KVGD V   L     +  +     ++   PS +S  +A++ P    T + ++F    L+    ES L+H GS G G  TF I   K     +FVT  S E     +D   D           +Y TE     +K  +  KGVD+IL+ + + +   N   L   GR+
Sbjct: 1801 SPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFG-LSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRI 2037          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH_SULAC (NAD-dependent alcohol dehydrogenase OS=Sulfolobus acidocaldarius GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 69/261 (26.44%), Postives = 121/261 (46.36%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY----PPPKGASPYP-GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSL 701
            MKA+++ + G P  L+L++++ P++   +VL+KV+   +   D   R G+        K   P   G E +G ++ +G NV  +K  D+V             C +           LG    GGY E V VP  + +     +S   A+       T +  + + ++L P +S ++ G   G+G+ A+Q+ K   G  +     SEE L +  +LGAD   +   E+ V ++   T G+GVD I+D +G+ +   N  +L
Sbjct:    1 MKAMLLHKFGEP--LRLEDMDVPKVGVGQVLVKVDYAGVCHTDLSVRSGAIFNRISSSKPTLPLVIGHEIAGEVVELGGNVEGFKKSDKVLIDPWIGDGSCHYCKIGEDQYCDNPKWLGINVNGGYGEYVLVPDYRYMFKLRNLSTSTASPLACSGVTAYRALRL-ANLDPSKSVMIIGAGGGLGSIAVQIAKAIHGSFIIGVDVSEEGLKLATNLGADYVTSKVDEEEVRKI---TTGRGVDAIIDFVGSEFTTSNYYTL 255          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS8_DICDI (Probable polyketide synthase 8/35 OS=Dictyostelium discoideum GN=pks8 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 66/239 (27.62%), Postives = 105/239 (43.93%), Query Frame = 3
Query:   48 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP---PPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS--PGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEEKLAVCKDLGADVCIN-YKTED--FVARVKEE-----TGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            SP +    + +  +++D++V +K  AT +N  D L   GS           P  G E SG I  VG NV  +KVGD V   L     +  +      +   PS +S  +A++ P    T + ++F    L+    ES L+H GS   G    ++ K +G +  +FVT   +E      D   D     Y   D  +V  +K E     +  KGVD+IL+ + + +   N + L   GR+
Sbjct: 1802 SPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFG-LSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRI 2039          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS6_DICDI (Probable polyketide synthase 6 OS=Dictyostelium discoideum GN=pks6 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 67/238 (28.15%), Postives = 111/238 (46.64%), Query Frame = 3
Query:   48 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP--GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS--PGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEE-KLAVCKDLGADVCINYKTED--FVARVKEE-----TGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            SP +    + +  +++D++V +K  AT +N  D L   GS       +  P  G E SG I  VG NV  +KVGD V   L     +  +     ++   PS +S  +A++ P    T + ++F    L+    ES L+H G  G G    ++ K +G +  +FVT  S++ K  + K  G  +   Y   D  +VA +K +     +  KGVD+IL+ + + +   N   L   GR+
Sbjct: 1803 SPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFG-LSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRI 2039          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS7_DICDI (Probable polyketide synthase 7 OS=Dictyostelium discoideum GN=pks7 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 66/238 (27.73%), Postives = 107/238 (44.96%), Query Frame = 3
Query:   48 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP--GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS--PGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEEKLAVCKDLGADVCIN-YKTED--FVARVKEE-----TGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            SP +    + +  +++D++V +K  AT +N  D L   GS       +  P  G E SG I  VG NV  +KVGD V   L     +  +      +   PS +S  +A++ P      + ++F    L+    ES L+H GS G G    ++ K +G +  +FVT  S+E      D   D     Y   D  +V  +K E     +  KGVD+IL+ + + +   N + L  + R+
Sbjct: 1798 SPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFG-LSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARI 2034          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 69/263 (26.24%), Postives = 115/263 (43.73%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQ----------------------VCALLGGGGY------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            MKA VIT+  + EV   ++ +   +K  E L+++E   +   D   + G +    G     G E  G +  VG+ V+  KVGD+                      +C  +   GY      AE+  V A   + VP G+    A++      T +  V   S + PG+   ++G   G+G  A+Q  K     +V     ++E+LA  K+LGAD+ IN K ED    ++E+ GG    V+   +  S F   ++++   GR+
Sbjct:    1 MKAAVITKDHTIEV---KDTKLRPLKYGEALLEMEYCGVCHTDLHVKNGDFGDETGR--ITGHEGIGIVKQVGEGVTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRNVENAGYTVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTTYKAV-KVSQIQPGQWLAIYG-LGGLGNLALQYAKNVFNAKVIAIDVNDEQLAFAKELGADMVINPKNEDAAKIIQEKVGGAHATVV-TAVAKSAFNSAVEAIRAGGRV 255          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ZDH1_STAES9.511e-1327.64Zinc-type alcohol dehydrogenase-like protein SE_17... [more]
YJMD_BACSU9.511e-1327.95Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
MECR_DROME9.511e-1328.80Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
TOXD_COCCA1.242e-1229.61Protein TOXD OS=Cochliobolus carbonum GN=TOXD PE=3... [more]
PKS9_DICDI1.242e-1228.99Probable polyketide synthase 9/36 OS=Dictyostelium... [more]
ADH_SULAC1.242e-1226.44NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
PKS8_DICDI1.622e-1227.62Probable polyketide synthase 8/35 OS=Dictyostelium... [more]
PKS6_DICDI1.622e-1228.15Probable polyketide synthase 6 OS=Dictyostelium di... [more]
PKS7_DICDI2.119e-1227.73Probable polyketide synthase 7 OS=Dictyostelium di... [more]
ADH1_ZYMMO2.119e-1226.24Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]

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Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
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