FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS28_DICDI (Probable polyketide synthase 28 OS=Dictyostelium discoideum GN=pks28 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 60/235 (25.53%), Postives = 106/235 (45.11%), Query Frame = 3
Query:  102 EVLIKVEATALNRADTLQRKGSYPPPKGA---------------SPYPGLECSGTILSVGKNVSR--WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKL-AVCKDLGADVCINY--KTEDFVARVKE------ETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            EV I+++AT +N  D L   G                       +P  G + SG I  +G +  +  +KVGD VC +         V +    +   P   +   +A+ P +  T   +++   +L   ES L+H  + GIG  ++ + KC   QG  +F+T GS++K   + K+ G+ +   Y  + +D+V  +K       E   +GVD+IL+ + + +   N   LN+ GR+
Sbjct: 1962 EVEIEIKATGINYKDYLMHIGMVSSDLDLKYGKEYEVENCIGIENPMIGNDFSGIITRLGSDAEKKKFKVGDHVCGVASKTS-GSHVVIDYNFIYHQPLNYNHSISASIPSIYVTSLHSIYGVGNLKSNESILIHSAAGGIGISSLDLLKCKKHQG-HIFLTVGSKDKEDYLKKNYGSFITAIYSSRNKDYVNEIKNKLIELGEVKQQGVDLILNTLSSEFMDSNFQCLNMSGRI 2194          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH_SULSR (NAD-dependent alcohol dehydrogenase OS=Sulfolobus sp. (strain RC3) GN=adh PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 68/249 (27.31%), Postives = 108/249 (43.37%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 659
            M+A+ + + G P  L L++++ P+ K  +VLIKVEA  +  +D   R+G +   +             G E +G I  +G  V  +  GD V             C +           LG    G YAE V  P  + +     ++  +A+       T +  V   S L P ++ +V G   G+GT A+Q+ K  G    +     EE +   K  GAD  IN   +D +A ++  T GKGVD ++D
Sbjct:    1 MRAVRLVEIGKP--LVLKDIDIPKPKGAQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEMGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVLNPHYKYMYKLRRLNAVEASPLTCSGITTYRAVRKAS-LDPTKTLVVVGAGGGLGTMAVQIAKAVGGATIIGVDVREEAVETAKRAGADYVINASVQDPLAEIRRITEGKGVDAVID 246          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH2_CAEEL (Alcohol dehydrogenase 2 OS=Caenorhabditis elegans GN=sodh-2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12
Identity = 57/242 (23.55%), Postives = 109/242 (45.04%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-YKTEDFVARVKEETGGKGVDVI 653
            T  A++  + G P  L++++V  PQ +++E+L+K+E + +  +D    +G +          G E +GT++++G  V  W +GD+    L                              G + E + +     + V +  +L  AA       T + ++  T ++ PG+  ++ G   G+G+F IQ  K  G+RV V      K   C++LGA+  ++ + T D VA +++ T G    V+
Sbjct:    9 TQSALIFEKYGGP--LEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHIQNYGIDRHGTFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAYKSLKAT-NVKPGQIVVLTGAGGGLGSFGIQYAKAMGMRV-VAVDHISKEDHCRNLGAEWFVDAFDTPDIVAHIRKLTNGGAHGVV 246          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS26_DICDI (Probable polyketide synthase 26 OS=Dictyostelium discoideum GN=pks26 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 67/231 (29.00%), Postives = 110/231 (47.62%), Query Frame = 3
Query:   87 QIKDDEVLIKVEATALNRADTLQRKGSYPPP----KGAS-PYPGLECSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEEKLAVCKDLGADV---CINYKTEDFVARVKEE-----TGGKGVDVILDCMGAS-YFQRNLDSLNIDGRL 719
            ++K +E+ + V+AT +N  D L      P      KG S P  G + SG I  +G     N + +KVGDQV  +      A  + V    +   PS +S   A++ P V  T   +++   ++   ES L+H  S GIG  A+ + K +  +  +FVT GS+EK     D   D      + + +D++  +K +     +  KGVD+IL+ + +S +   N   LN  GR+
Sbjct: 1812 KLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTT-ASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRI 2041          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS22_DICDI (Probable polyketide synthase 22 OS=Dictyostelium discoideum GN=pks22 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 71/232 (30.60%), Postives = 108/232 (46.55%), Query Frame = 3
Query:  105 VLIKVEATALNRADTLQRK------GSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL---SPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEEKLAVCKD-LGADVCINYKTE--DFVARVKE----------ETGGKG---VDVILDCMGASYFQRNLDSLNIDGRL 719
            V +KV A+ +N  D L  +       S      + P  G E SG +  VGKNV+++KVGD V  +     ++  V V   ++   PS +S  + A+   V  T + ++F    L      E+ L+H GS GIG   I + +  G +  +FVT GSEEK    KD  G  +   Y T+  D+   +KE          E GG     VD+I++ + A Y   N + L+  GR+
Sbjct: 1796 VEVKVMASGVNFKDFLVYRQLINMANSNENGDPSKPQFGYELSGIVTKVGKNVTKFKVGDHVMGVT-FHTFSSSVHVDQDRIELKPSNISWFE-ASISLVYLTSYCSLFELGRLGLHGSTETVLIHSGSGGIGLSCIDLLQVYGFKGFLFVTVGSEEKKQFLKDRYGNFITEIYSTKNTDYEYLIKEKLIELKAPSQEYGGFSMICVDLIINTLSADYMDANFNCLSQGGRI 2025          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 61/240 (25.42%), Postives = 99/240 (41.25%), Query Frame = 3
Query:   21 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD----------------------QVCALLGGGGYA------EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVI 653
            KAIV  +      L+ ++V  P+ K +E+L+ V+ + +  +D     G +P         G E +G ++ +G NV  WKVGD                        C  L G G+       E     A Q   +P  V+L + A       TV+  +   +++ PG+   + G   G+G+ AIQ     G RV    G   K  + + LG ++ I++  E D V  + + T G    VI
Sbjct:   11 KAIVFYETDGK--LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKAL-KRANVIPGQWVTISGACGGLGSLAIQYALAMGYRVIGIDGGNAKRKLFEQLGGEIFIDFTEEKDIVGAIIKATNGGSHGVI 247          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 61/240 (25.42%), Postives = 99/240 (41.25%), Query Frame = 3
Query:   21 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD----------------------QVCALLGGGGYA------EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVI 653
            KAIV  +      L+ ++V  P+ K +E+L+ V+ + +  +D     G +P         G E +G ++ +G NV  WKVGD                        C  L G G+       E     A Q   +P  V+L + A       TV+  +   +++ PG+   + G   G+G+ AIQ     G RV    G   K  + + LG ++ I++  E D V  + + T G    VI
Sbjct:   11 KAIVFYETDGK--LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKAL-KRANVIPGQWVTISGACGGLGSLAIQYALAMGYRVIGIDGGNAKRKLFEQLGGEIFIDFTEEKDIVGAIIKATNGGSHGVI 247          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_CAEEL (Alcohol dehydrogenase 1 OS=Caenorhabditis elegans GN=sodh-1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 59/240 (24.58%), Postives = 104/240 (43.33%), Query Frame = 3
Query:    3 ESEGTMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-YKTEDFVARVKEETGG 635
            E   T +A+V      P  L++++V  P   DDE+L+K+E + +  +D     G            G E +G+++ +GKNV+ W++GD+    L                              G + E + +       +    +L  AA       TV+  +   S+++PG+  ++ G   G+G+ AIQ     G+RV V      K A CK LGA+  ++ ++T D V+ + + T G
Sbjct:    4 ELPSTQRALVFDTWNGP--LEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQNYGFDRSGTFQEYLTIRGVDAAKINKDTNLAAAAPILCAGVTVYKAL-KESNVAPGQIIVLTGAGGGLGSLAIQYACAMGMRV-VAMDHGSKEAHCKGLGAEWFVDAFETPDIVSHITKLTEG 239          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS23_DICDI (Probable polyketide synthase 23 OS=Dictyostelium discoideum GN=pks23 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12
Identity = 72/234 (30.77%), Postives = 109/234 (46.58%), Query Frame = 3
Query:  105 VLIKVEATALNRADTLQRK------GSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGG--GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL---SPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEEKLAVCKD-LGADVCINYKTE--DFVARVKE----------ETGGKG---VDVILDCMGASYFQRNLDSLNIDGRL 719
            V +KV A+ +N  D L  +       S      + P  G E SG +  VGKNV+++KVGD V   +GG    ++  V V   ++   PS +S  +A+    V  T + ++F    L      E+ L+H GS GIG   I + +  G +  +FVT GSEEK    KD  G  +   Y T+  D+   +KE          E G      VD+I++ + A Y   N + L+  GR+
Sbjct: 1796 VEVKVMASGVNFKDFLVYRQLINMANSNENGDPSKPQFGYELSGIVTKVGKNVTKFKVGDHV---MGGAFHTFSSSVHVDQDRIELKPSNISWFEASQ-SLVYLTSYCSLFELGRLDLYGSTETVLIHSGSGGIGLSCIDLLQVYGFKGFLFVTVGSEEKKQFLKDRYGNFITEIYSTKNTDYEYLIKEKLIELKAPSQEYGSFSMICVDLIINTLSADYMDANFNCLSQGGRI 2025          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: MECR_RAT (Trans-2-enoyl-CoA reductase, mitochondrial OS=Rattus norvegicus GN=Mecr PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 54/192 (28.12%), Postives = 89/192 (46.35%), Query Frame = 3
Query:   18 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGAD 575
            ++A+V    G P +V+QL+ +E   ++  +V +K+ A  +N +D    +G+Y          G E  G +++VG +VS  K GD V     G G     AV + + L  VP  + L+ AA      CT +  +     L PG+S + +  +SG+G   IQ+    G++          +       KDLGAD
Sbjct:   43 VRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSEEALIGVPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALGLKTINVIRDRPDIKKLTDRLKDLGAD 234          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
PKS28_DICDI2.767e-1225.53Probable polyketide synthase 28 OS=Dictyostelium d... [more]
ADH_SULSR2.767e-1227.31NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH2_CAEEL3.614e-1223.55Alcohol dehydrogenase 2 OS=Caenorhabditis elegans ... [more]
PKS26_DICDI4.720e-1229.00Probable polyketide synthase 26 OS=Dictyostelium d... [more]
PKS22_DICDI4.720e-1230.60Probable polyketide synthase 22 OS=Dictyostelium d... [more]
ADH5_YEAST4.720e-1225.42Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS4.720e-1225.42Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH1_CAEEL4.720e-1224.58Alcohol dehydrogenase 1 OS=Caenorhabditis elegans ... [more]
PKS23_DICDI8.051e-1230.77Probable polyketide synthase 23 OS=Dictyostelium d... [more]
MECR_RAT1.794e-1128.13Trans-2-enoyl-CoA reductase, mitochondrial OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
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