FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:92..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAW (Zinc-type alcohol dehydrogenase-like protein MW2112 OS=Staphylococcus aureus (strain MW2) GN=MW2112 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 64/217 (29.49%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   18 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS------PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 626
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ +N+K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAS (Zinc-type alcohol dehydrogenase-like protein SAS2087 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2087 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 64/217 (29.49%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   18 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS------PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 626
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ +N+K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: YOGA_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yogA OS=Bacillus subtilis GN=yogA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 70/254 (27.56%), Postives = 109/254 (42.91%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA-----------------LLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            MKA++         L +Q+V   +    EV +K+++  LN  D    K      +      G + +G I  +G+ V    V  +V                   +LGG   G  AE V +P+   +  P+ +S ++A   P  A T +  +F    L  GE  L+ G  SG+ T+A+ M K  G  V VT+ SEEK      LGAD        D  +   E+  GK +DV+LD +G + F      +  +GR+
Sbjct:    1 MKAVIHNGKAGLLGLSVQDVPSTKPGYGEVKVKLKSAGLNHRDLFLMKNK--SEQDPHMILGSDGAGIIEEIGEGVKNVTVQTEVVIFPTLNWDLTENVPPVPEILGGPSDGTLAEYVIIPSQNAIKKPAYLSWEEAGVLPLSALTAYRALFTKGQLKKGEHLLIPGIGSGVATYALFMAKAIGATVSVTSRSEEKRKKALKLGADYAF-----DSYSNWDEQLQGKKIDVVLDSIGPALFSEYFRHVKPNGRI 247          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAN (Zinc-type alcohol dehydrogenase-like protein SA1988 OS=Staphylococcus aureus (strain N315) GN=SA1988 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 64/217 (29.49%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   18 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 626
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ +N+K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMKVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENVGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAM (Zinc-type alcohol dehydrogenase-like protein SAV2186 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2186 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 64/217 (29.49%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   18 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 626
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ +N+K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMKVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENVGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAC (Zinc-type alcohol dehydrogenase-like protein SACOL2177 OS=Staphylococcus aureus (strain COL) GN=SACOL2177 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 64/216 (29.63%), Postives = 103/216 (47.69%), Query Frame = 3
Query:   18 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 623
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G +V+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ +N+K ED V + KE
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQ---APRVLGFDAIGTVEAIGPDVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISTNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKE 210          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: YBI2_SCHPO (Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe GN=SPBC16A3.02c PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 66/244 (27.05%), Postives = 108/244 (44.26%), Query Frame = 3
Query:   12 GTMKAIVITQPGSP-EVLQLQE---VEDP-QIKDDEVLIKVEATALNRAD-------TLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG-------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR 686
            GT  A +  + G P +VL L++   + +P ++   +VL++V AT++N  D        +  K  +  P      PG + +G +L+VG  V  +    +V            GG  A  +      V  +P GVS  + A F     T W  +     + PG   ++ G S G+GTFA+ + K     V  T  S E L +CK LGA   ++YK ++ V R+ +       D + DC+  +   R
Sbjct:   10 GTKSAWLYNRTGKPKDVLYLEKGLHIPNPAELGPYDVLVEVVATSINPLDYKLMNTYQMIAKALFKLPN----IPGYDFAGRVLAVGSEVKEFSATQRVWGCQSFPRAGRQGGSCATHIVTGDKDVWHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKVKPGTKLVIEGASGGVGTFAVALAKALECEV-TTISSTENLDLCKSLGATHTLDYKKDNLVERLADL---GPYDFVFDCVNDNVLYR 245          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS33_DICDI (Probable polyketide synthase 33 OS=Dictyostelium discoideum GN=pks33 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 75/266 (28.20%), Postives = 124/266 (46.62%), Query Frame = 3
Query:    3 ESEGTMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------------SYPPPKGA---SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLA-VCKDLGADVCINY--KTEDFVARVKE------ETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            ES  T K  +  Q  S    QL   +D ++  +EV I+++AT +N  D L   G             Y    G    +P  G + SG I  +G NV ++KVGDQVC  +G    +  V V    +   P   +   +A+ P +  T   +++   +L   ES L+H  + GIG  ++ + K    QG  +F+T GS++K   + K  G+ +   Y  + +++V  +K       E   +GVD+IL+ + + Y   N   LN+ GR+
Sbjct: 1879 ESFETNKDNLYIQLNSNLEYQLYSKKD-ELNSNEVEIEIKATGINYKDYLMYIGMIGSDLDIKYGKEYEIENGIGIDNPNIGNDFSGIITRLGNNVKKFKVGDQVCG-IGPKASSSHVIVDFNFIYYKPFNCNHSVSASIPSIYITSLHSIYSIGNLKSNESILIHSAAGGIGISSLDLLKSKQHQGY-IFLTVGSKDKEEYLTKKYGSLITAIYSSRNKNYVKDIKNKLIELGEVEQQGVDLILNTLSSEYMDSNFQCLNLSGRI 2141          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS31_DICDI (Probable polyketide synthase 31 OS=Dictyostelium discoideum GN=pks31 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 74/266 (27.82%), Postives = 120/266 (45.11%), Query Frame = 3
Query:    3 ESEGTMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA-------------SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLA-VCKDLGADVCINY--KTEDFVARVKE--------ETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            ES  T K  +  Q  S    QL   +D ++  +EV I+V+AT +N  D L   G                     +P  G + SG I  +G NV ++KVGDQVC   G    +  V +    +   P   S   +A+ P +  T   +++   +L   ES L+H  + GIG  ++ + K    QG  +F+T GS++K   +    G+ +   Y  + +D+V  +K         E   +GVD+IL+ + + Y   N   LN+ GR+
Sbjct: 1864 ESFETNKDNLYIQLNSNIEYQLYSKKD-ELNSNEVEIEVKATGINYKDYLMYIGMIGSDLDIKYGKEIEYGIGIDNPKIGNDFSGIITRLGSNVKKFKVGDQVCG-FGSKTNSSHVIIDFNSIYYKPLNCSHSVSASIPSIYITTLHSIYSIGNLKSNESILIHSAAGGIGISSLDLLKSKQHQGY-IFLTVGSKDKEEYLINKYGSLITAIYSSRNKDYVYEIKNKLIELGVVEQHQQGVDLILNTLSSEYMDSNFQCLNLSGRI 2126          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS32_DICDI (Probable polyketide synthase 32 OS=Dictyostelium discoideum GN=pks32 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 75/268 (27.99%), Postives = 123/268 (45.90%), Query Frame = 3
Query:    3 ESEGTMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------------SYPPPKGA---SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLA-VCKDLGADVCINY--KTEDFVARVKE--------ETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            ES  T K  +  Q  S    QL   +D ++  +EV I+++A  +N  D L   G             Y    G    +P  G + SG I  +G NV ++KVGDQVC  +G    +  V V    +   P   +   +A+ P +  T   +++   +L   ES L+H  + GIG  ++ + K    QG  +F+T GS++K   + K  G+ +   Y  + +D+V  +K         E   +GVD+IL+ + + Y   N   LN+ GR+
Sbjct: 1888 ESFETNKDNLYIQLNSNLEYQLYSKKD-ELNSNEVEIEIKANGINYKDYLMYIGMIGSDLDIKYGKEYEIENGIGIDNPNIGNDFSGIITRLGSNVKKFKVGDQVCG-VGSKTNSSHVIVDYNYIYYKPLNYNHSVSASIPSIYITSLHSIYSIGNLKSNESILIHSAAGGIGISSLDLLKSKQHQGY-IFLTVGSKDKEEYLTKKYGSLITAIYSSRNKDYVYEIKNKLIELSVVEQHQQGVDLILNTLSSEYMDSNFQCLNLSGRI 2152          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ZDH1_STAAW1.852e-1629.49Zinc-type alcohol dehydrogenase-like protein MW211... [more]
ZDH1_STAAS1.852e-1629.49Zinc-type alcohol dehydrogenase-like protein SAS20... [more]
YOGA_BACSU1.852e-1627.56Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ZDH1_STAAN2.419e-1629.49Zinc-type alcohol dehydrogenase-like protein SA198... [more]
ZDH1_STAAM2.419e-1629.49Zinc-type alcohol dehydrogenase-like protein SAV21... [more]
ZDH1_STAAC2.419e-1629.63Zinc-type alcohol dehydrogenase-like protein SACOL... [more]
YBI2_SCHPO2.419e-1627.05Zinc-type alcohol dehydrogenase-like protein C16A3... [more]
PKS33_DICDI3.159e-1628.20Probable polyketide synthase 33 OS=Dictyostelium d... [more]
PKS31_DICDI3.159e-1627.82Probable polyketide synthase 31 OS=Dictyostelium d... [more]
PKS32_DICDI4.125e-1627.99Probable polyketide synthase 32 OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
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