FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:92..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS27_DICDI (Probable polyketide synthase 27 OS=Dictyostelium discoideum GN=pks27 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 65/240 (27.08%), Postives = 112/240 (46.67%), Query Frame = 3
Query:   87 QIKDDEVLIKVEATALNRADTLQRKG------------SYPPPKGA---SPYPGLECSGTILSVGKNVSR--WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKL-AVCKDLGADVCINY--KTEDFVARVKE------ETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            +I   EV I+++AT +N  D L   G             Y    G    +P  G++ SG I  +G +  R  +KVGD VC +         V +    +   P   +   +A+ P +  T   +++   +L   ES L+H  +SGIG  ++ + KC   QG  +F+T GS++K   + K+ G+ +   Y  + +D+V  +K       E   +GVD+IL+ + + +   N   LN+ GR+
Sbjct: 1949 EINSKEVEIEIKATGINYKDYLMHIGMVSSDLDLKYGKEYEVENGIGIENPMIGIDFSGIITRLGSDAERNKFKVGDHVCGVASKTS-GSHVVIDYNFIYHQPLNYNHSISASIPSIYITSLHSIYGVGNLKSNESILIHSAASGIGISSLDLLKCKKHQG-HIFLTVGSKDKEDYLIKNYGSFITAIYSSRNKDYVNEIKNKLIELGEVEQQGVDLILNTLSSEFMDSNFQCLNMSGRI 2186          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS17_DICDI (Probable polyketide synthase 17 OS=Dictyostelium discoideum GN=pks17 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 65/229 (28.38%), Postives = 111/229 (48.47%), Query Frame = 3
Query:  105 VLIKVEATALNRADTLQRKGSYPPP---KGA--SPYPGLECSGTILSVGKN-VSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF-MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--------------GVRVFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            V IKV +T +N  D+L  +G  P     KG   SP  GLEC+G I  V  + V+R+KVGDQV         +  V     +++  P  +S  +AAA   V  T + ++F + + ++  ES LVH  + G+G  ++ + K +                 ++ T GS+EK+   ++   D+     N +  ++   +K+++   GVD+IL+ +   Y   N  SL+  GR+
Sbjct: 1874 VEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGF-ASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRI 2101          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 64/242 (26.45%), Postives = 105/242 (43.39%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVI 653
            T K ++  + G    L  +++  P+ K +E+LI V+ + +   D    KG +P         G E +G ++++G NV  WK+GD              + C L          L G    G + +     A Q   +P+G  L   A       TV+  +  T+ +  G+   + G + G+G+ A+Q  K  G RV    G E K  + K LG +V I++ K++D V  V + T G    VI
Sbjct:    6 TQKGVIFYENGGQ--LYYKDIPVPKPKSNELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPDADLSGYTHDGSFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKAL-KTAEMKAGDWVAISGAAGGLGSLAVQYAKAMGFRVLGIDGGEGKEELFKSLGGEVFIDFTKSKDIVGEVIKATNGGAHGVI 244          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS38_DICDI (Probable polyketide synthase 38 OS=Dictyostelium discoideum GN=pks38 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 73/265 (27.55%), Postives = 123/265 (46.42%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------------SYPPPKGA---SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLA-VCKDLGADVCINY--KTEDFVARVK---------EETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            T K  +  Q  S    QL   +D ++  +EV I+++AT++N  D L   G             Y    G    +P  G + SG I  +G NV  +KVGDQVC  +G    +  + V    +   P   S   +A+ P V  T   +++   +L   ES L+H  + GIG  ++ + K    QG  +F+T GS++K   + K  G+ +   Y  + +++V  +K         E+   +GVD+IL+ + + +   N   LN+ GR+
Sbjct: 1906 TNKDNLFIQLNSNLEYQLYSKKD-ELNSNEVEIEIKATSINYKDYLMYIGMIGTDIDIKYGKEYEIENGIGIDNPKIGNDFSGIITRLGCNVKDFKVGDQVCG-VGSKTNSSHIIVDYNYIYYKPLNYSYSVSASIPSVYITSLHSIYNIGNLKSNESILIHSAAGGIGISSLDLLKSKQHQGY-IFLTVGSKDKEEYLIKKYGSLITAIYSSRNKNYVKDIKNKLIELGEVEQHQQQGVDLILNTLSSEFMDSNFQCLNLSGRI 2167          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS45_DICDI (Probable polyketide synthase 45 OS=Dictyostelium discoideum GN=pks45 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 56/198 (28.28%), Postives = 98/198 (49.49%), Query Frame = 3
Query:   72 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKG------ASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--SPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADV---CINYKTEDFVARVKEE 626
            E +   +K++E+ ++V AT +N  D+L  +   PP         + P  G+ECSG +  +G  V+++KVGD V  +      +  +      VL  P  +S  +AA+ P V CT + ++F + +L     ES L+H  S GIG   + + K  G   +++VT GS+EK    ++   D      + +  DF+  +K +
Sbjct: 1910 EAKQSNLKENEIEVQVVATGINFKDSLIFRNLVPPVLANHDGDYSKPEFGIECSGIVSRIGSKVTKFKVGDSVLGISWKSTSSHAINYQDAFVLK-PDNISFVEAASIPLVYCTSFYSLFYSGNLKIENNESVLIHQASGGIGLACLNILKSCGFKSKLYVTVGSKEKEDYLRETYGDFITGIYSSRNTDFLENIKTD 2106          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS30_DICDI (Probable polyketide synthase 30 OS=Dictyostelium discoideum GN=pks30 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 64/238 (26.89%), Postives = 110/238 (46.22%), Query Frame = 3
Query:   87 QIKDDEVLIKVEATALNRADTLQRKG------------SYPPPKGA---SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLA-VCKDLGADVCINY--KTEDFVARVKE--------ETGGKGVDVILDCMGASYFQRNLDSLNIDG 713
            ++  +EV I+V+A  +N  D L   G             Y    G    +P  G + SG I  +G NV ++KVGDQVC  +G    +  V +    +   P   +   +A+ P +  T   +++   +L   ES L+H  + G+G  ++ + K    QG  +F+T GS++K   + K  G+ +   Y  + +D+V  +K         E   +GVD+IL+ + + Y   N   LN+ G
Sbjct: 1898 ELNSNEVEIEVKANGINYKDYLMYIGMIGTDLDIKYGKEYEIENGIGIDNPNIGNDFSGIITRLGSNVKKFKVGDQVCG-IGSKTNSSHVIIDFNFIYYKPLNYNHSVSASIPSIYITSLHSIYSIGNLKSNESILIHSAAGGVGISSLDLLKSKQHQGY-IFLTVGSKDKEEYLTKKYGSLITAIYSSRNKDYVYEIKNKLIELGVVEQNQQGVDIILNTLSSEYMDSNFQCLNMSG 2133          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 78/243 (32.10%), Postives = 113/243 (46.50%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGS------------YPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 674
            M A VI + G  EVL+  Q +  P I   +EV+IKV A ++N  D   R G             +   KG   +P   G + SG ++  G +V  ++ GD+V A +     G  +E V V   +V   P  ++   AA+ P VA T WS +     LS     G+  L+ G S G+GTFAIQ+ K  G  V     S++   + + LGAD  I+Y       ++K     K  D ILD +G S
Sbjct:   43 MPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTKGEE-FPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVGTFAIQVMKAWGAHVTAVC-SKDASELVRKLGADEVIDYTLGSVEEQLKSL---KLFDFILDNVGGS 280          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS37_DICDI (Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 62/241 (25.73%), Postives = 104/241 (43.15%), Query Frame = 3
Query:   60 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVP---------SGVSLKDA----------AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKDLGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGR 716
            L++++    +    +VL++VE   LN  D L+  G    P   +   G E SG ++ +G+ V+   VG  V  +         V   +  V P+P         S  ++ D              P V  T W ++ +   L  GE  L+H G  G+G   IQ+    G  + VT GS E+K  + K+ G D    Y +    F   +   T G+GVD++L+ +   Y ++++  L+  GR
Sbjct: 1723 LKIKQFRQMKCGVGQVLVRVEMCTLNFRDILKSLGRDYDPIHLNSM-GDEFSGKVIEIGEGVNNLSVGQYVFGINMSKSMGSFVCCNSDLVFPIPIPTPSSSSSSNENIDDQEIISKLLNQYCTIPIVFLTSWYSIVIQGRLKKGEKILIHSGCGGVGLATIQISMMIGAEIHVTVGSNEKKQYLIKEFGIDEKRIYSSRSLQFYNDLMVNTDGQGVDMVLNSLSGEYLEKSIQCLSQYGR 1962          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH_SULTO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus tokodaii GN=adh PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 73/249 (29.32%), Postives = 109/249 (43.78%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 659
            M+A+ + + G P  L+L+++  P+ K  +VLIK+EA  +  +D   R+G +   +             G E +G I  VG  V  +  GD V             C +           LG    G YAE V VP  + L     +S  +AA       T +  V   S L P ++ +V G   G+GT AIQ+ K   G  +      EE L   K  GAD  IN  ++D V+ ++  T GKG D ++D
Sbjct:    1 MRAMRLVEIGKP--LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKAS-LDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVID 246          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: QORL1_BOVIN (Quinone oxidoreductase-like protein 1 OS=Bos taurus GN=CRYZL1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 70/225 (31.11%), Postives = 108/225 (48.00%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQL--QEVED-PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK----EETGGKGVDVILD 659
            MK +   Q  + E +    QE E+ P  +D+ V ++V+A AL++ +T +        K   P  G E +G +L VG  VS ++  D+V  +L       G  E V V    ++  P  V+  +AA        V++ +   SHLSPG+S L+  G+S +GT AIQ+   +G +V  TA S E     +     +       +  A V     EETGG GVD++LD
Sbjct:    1 MKGLYFQQSSTNEEITFVFQERENLPVTEDNYVKLQVKACALSQINT-KLLAEMKMEKEFFPV-GREVAGIVLDVGSKVSFFQPDDEVVGILPLDSEDPGLCEAVRVHEHYLVHKPEKVTWTEAAGTIRDGLRVYTALHYLSHLSPGKSVLIMDGASALGTIAIQLAHHRGAKVISTACSLEDKQFLERFRPPIARVIDVSNGKAHVAESCLEETGGLGVDIVLD 223          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
PKS27_DICDI3.492e-1527.08Probable polyketide synthase 27 OS=Dictyostelium d... [more]
PKS17_DICDI3.492e-1528.38Probable polyketide synthase 17 OS=Dictyostelium d... [more]
ADH2_KLUMA4.561e-1526.45Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
PKS38_DICDI5.957e-1527.55Probable polyketide synthase 38 OS=Dictyostelium d... [more]
PKS45_DICDI7.780e-1528.28Probable polyketide synthase 45 OS=Dictyostelium d... [more]
PKS30_DICDI7.780e-1526.89Probable polyketide synthase 30 OS=Dictyostelium d... [more]
RT4I1_MOUSE1.016e-1432.10Reticulon-4-interacting protein 1, mitochondrial O... [more]
PKS37_DICDI1.016e-1425.73Probable polyketide synthase 37 OS=Dictyostelium d... [more]
ADH_SULTO1.016e-1429.32NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
QORL1_BOVIN1.327e-1431.11Quinone oxidoreductase-like protein 1 OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
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