FC931146

Overview
NameFC931146
Unique NameFC931146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15282 contig Ccv1_Contig15282:1..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 7.794e-28
Identity = 62/135 (45.93%), Postives = 82/135 (60.74%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N++D +YFG + IGSP QNF+VIFDTGSSNLWVPS  C  S +C  H  +   +S+TY E+G    I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +AVG   PV+D
Sbjct:   71 PLINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSSTYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAVGGVTPVFD 204          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27
Identity = 61/134 (45.52%), Postives = 83/134 (61.94%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            L+N++DA+YFG I IG+PPQ+F+VIFDTGSSNLWVPS+ C  S++C  H R+    S+TY    ++  I YG+GS++G                  F  +  E  LTFL A FDGI+GL +  I+  DA PV+D
Sbjct:   67 LENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPGLTFLFAPFDGILGLAYPSISSSDATPVFD 199          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27
Identity = 59/134 (44.03%), Postives = 84/134 (62.69%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            L+N++DA+YFG I IG+PPQ F+VIFDTGSSNLWVPS+ C  S++C+ H R+    S+T+    ++  I YG+GS++G                  F  +  E  +TFL+A FDGI+GL +  I+  DA PV+D
Sbjct:   67 LENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYC-SSLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTGILGYDTVKVGNIEDTNQIFGLSKTEPGITFLVAPFDGILGLAYPSISASDATPVFD 199          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27
Identity = 62/132 (46.97%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVP 686
            PL N+++AQYF EI IG+P Q F VI DTGSSNLWVPS  C  S++C+ H++Y    S+TY   G    I YGSGS+ G+ SQ              F EAT E  L F   +FDGI+GL +  I+V   VP
Sbjct:   95 PLTNYLNAQYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDCT-SLACFLHAKYDHDASSTYKVNGSEFSIQYGSGSMEGYISQDVLTIGDLVIPGQDFAEATSEPGLAFAFGKFDGILGLAYDTISVNHIVP 225          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27
Identity = 59/135 (43.70%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N++D +YFG+I IG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+RY+  +S TY   G++  I YG+G+++G                  F E+  E   TF  + FDGI+GL +  +AV + +PV+D
Sbjct:   65 PLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYC-TSQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGILGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILGLAYPNLAVDNCIPVFD 198          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  258 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVP 686
            +R GD      P+ +++DA YFGEI IG+P QNF V+FDTGSSNLWVPS  C  S +C  H+R+   KS+T+    ++  + YGSGS++GFF                F  +  E    FL A FDGI+GL +  ++VGDA P
Sbjct:   54 YRFGDFSVTYEPM-DYLDAAYFGEISIGTPSQNFLVLFDTGSSNLWVPSVYCQ-SEACTTHNRFNPSKSSTFYTYDQTFSLEYGSGSLTGFFGYDTFTIQNIEVPNQEFGLSETEPGTNFLYAEFDGIMGLAYPSLSVGDATP 194          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_HUMAN (Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 62/141 (43.97%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  258 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            +R GD      P+  +MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  HSR+   +S+TY+  G++  + YGSGS++GFF                F  +  E    F+ A+FDGI+GL +  ++V +A
Sbjct:   54 YRFGDLSVTYEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEA 192          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 61/144 (42.36%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  282 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IWLSR 710
            D  PL+N++D +YFG IGIG+P QNF+V+FDTGSSNLWVPS  CY S++C  H+ +  + S+TY    K+  I YG+GS++G                  F  +  E       A FDGI+GL +  I+   A PV+D IW  R
Sbjct:   64 DEQPLENYLDVEYFGTIGIGTPAQNFTVVFDTGSSNLWVPSVYCY-SLACMDHNLFNPQDSSTYRATSKTVSITYGTGSMTGILGYDTVKVGGISDTNQIFGLSETEPGFFLYFAPFDGILGLAYPSISSSGATPVFDNIWNQR 206          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_CALJA (Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26
Identity = 61/141 (43.26%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  258 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            +R+ D      P+ ++MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  HSR+    S+TY+  G++  + YGSGS++GFF                F  +  E    F+ A+FDGI+GL +  +++G A
Sbjct:   54 YRVSDLSVSYEPM-DYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSASSTYSSNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSMGGA 192          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 3
Query:  303 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            +MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  H+R+   +S+TY+  G++  + YGSGS++GFF                F  +  E    F+ A+FDGI+G+ +  +A+G A
Sbjct:   68 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPNQSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTVQNIKVPHQEFGLSQNEPGTNFIYAQFDGIMGMAYPSLAMGGA 192          
The following BLAST results are available for this feature:
BLAST of FC931146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
CATE_RAT7.794e-2845.93Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]
PEPA4_RABIT1.329e-2745.52Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA1_RABIT1.329e-2744.03Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CARPV_CANAL3.868e-2746.97Vacuolar aspartic protease OS=Candida albicans GN=... [more]
CATE_RANCA8.617e-2743.70Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
PEPC_RABIT5.586e-2643.36Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
PEPC_HUMAN5.586e-2643.97Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1[more]
PEPA4_MACFU5.586e-2642.36Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPC_CALJA9.528e-2643.26Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1[more]
PEPC_SUNMU1.625e-2545.24Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34102A02EF PostHarvP1 Citrus clementina cDNA clone C34102A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931146 ID=FC931146; Name=FC931146; organism=Citrus clementina; type=EST; length=710bp
GGAAGTACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGA
AAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTT
ATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTAC
GGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCT
GCAAGAATAACAAAAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGG
CGTGCACCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGA
ACTTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCA
CAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCC
ATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACA
AGTCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATA
AACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGA
AGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAG
AAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTT
GGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACATATG
GTTGAGCAGG
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