FC931146

Overview
NameFC931146
Unique NameFC931146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.621e-25
Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = 3
Query:  258 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            +  GD      P+  +MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  HSR+   +S+TY+  G++  + YGSGS++GFF                F  +  E    F+ A+FDGI+GL +  ++V  A
Sbjct:   43 YHFGDLSVSYEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPTLSVDGA 181          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 3
Query:  303 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            ++DA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  H+R+   KS+TY+  G++  + YGSGS++GFF                F  +  E    F+ A+FDGI+G+ +  +A+G A
Sbjct:   68 YLDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPSKSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTLQNIKVPHQEFGLSQNEPGENFVYAQFDGIMGMAYPTLAMGGA 192          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25
Identity = 63/166 (37.95%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  213 KKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDIWLSR 710
            +K++Y    GVS  +   G+     +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS+ WVPS  C  S +C  H R+  RKS+T+  +GK   I YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   +VPV+D  + R
Sbjct:   45 QKQQY----GVSSEYSGFGEVAS--VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSVPVFDNMMDR 203          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25
Identity = 61/166 (36.75%), Postives = 96/166 (57.83%), Query Frame = 3
Query:  213 KKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDIWLSR 710
            +K++Y    G+S  +   G+     +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS+ WVPS  C  S +C  H R+  RKS+T+  +GK   I+YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   ++PV+D  ++R
Sbjct:   45 QKQQY----GISSKYSGFGEVAS--VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSIPVFDNMMNR 203          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25
Identity = 56/126 (44.44%), Postives = 79/126 (62.70%), Query Frame = 3
Query:  303 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            +MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  + +C  H+R+   +S+TY+  G++  + YGSGS++GFF                F  +  E    F+ A+FDGI+G+ +  +A+G A
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-TQACTGHTRFNPSQSSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGMAYPSLAMGGA 192          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            PL+N+MD +YFG IGIG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  ++S+TY    +   + YG+GS++G                  F +  T  GS  +  A FDGI+GL +  IA   A PV+D IW
Sbjct:   65 PLENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQQSSTYQGTNQKLSVAYGTGSMTGILGYDTVQVGGITDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSIASSGATPVFDNIW 201          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_CHICK (Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24
Identity = 62/152 (40.79%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  255 HHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDIWLSR 710
            +H +  + E   P+ N+MDA Y+G I IG+P Q+FSVIFDTGSSNLWVPS  C  S +C  H R+   KS+TY    ++  I YG+GS+SG                  F  +  E    F    FDGI+GL F  I+   A PV+D  +S+
Sbjct:   38 YHPVLTATESYEPMTNYMDASYYGTISIGTPQQDFSVIFDTGSSNLWVPSIYCK-SSACSNHKRFDPSKSSTYVSTNETVYIAYGTGSMSGILGYDTVAVSSIDVQNQIFGLSETEPGSFFYYCNFDGILGLAFPSISSSGATPVFDNMMSQ 188          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.347e-24
Identity = 60/135 (44.44%), Postives = 81/135 (60.00%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            LKN+MD +YFG IGIG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  ++S+TY    +   I YG+GS++G                  F +  T  GS  +  A FDGI+GL + +I+   A PV+D
Sbjct:   66 LKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQESSTYQGTNRPVSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLY-YAPFDGILGLAYPQISASGATPVFD 198          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24
Identity = 60/142 (42.25%), Postives = 84/142 (59.15%), Query Frame = 3
Query:  282 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            D  PL+N++D +YFG IGIG+P Q+F+V+FDTGSSNLWVPS  C  S++C  H+R+    S+TY    ++  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+D IW
Sbjct:   64 DEQPLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYC-SSLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISSSGATPVFDNIW 203          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24
Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N+MD +YFG IGIG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  +KS+T+    ++  I YG+GS++G                  F +  T  GS  +  + FDGI+GL +  IA   A PV+D
Sbjct:   66 PLVNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQKSSTFQSTSQTLSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQTEPGSFLY-YSPFDGILGLAYPNIASSGATPVFD 199          
The following BLAST results are available for this feature:
BLAST of FC931146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
PEPC_MACFU3.621e-2543.26Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]
PEPC_SORUN6.176e-2545.24Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
CHYM_SHEEP6.176e-2537.95Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
CHYM_BOVIN6.176e-2536.75Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
PEPC_RHIFE8.066e-2544.44Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=... [more]
PEPA_RHIFE8.066e-2544.60Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPA_CHICK1.053e-2440.79Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1[more]
PEPA_CANFA2.347e-2444.44Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
PEPA_HUMAN3.065e-2442.25Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PEPA_SUNMU4.003e-2444.12Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34102A02EF PostHarvP1 Citrus clementina cDNA clone C34102A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931146 ID=FC931146; Name=FC931146; organism=Citrus clementina; type=EST; length=710bp
GGAAGTACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGA
AAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTT
ATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTAC
GGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCT
GCAAGAATAACAAAAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGG
CGTGCACCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGA
ACTTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCA
CAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCC
ATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACA
AGTCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATA
AACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGA
AGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAG
AAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTT
GGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACATATG
GTTGAGCAGG
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