FC931146

Overview
NameFC931146
Unique NameFC931146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15282 contig Ccv1_Contig15282:1..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21
Identity = 54/149 (36.24%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  258 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            H+  DS     P++N++D  Y G I +G+PPQ F VIFDTGS++LWVPS  C  S +C  H+ +   +S+T+   G+  ++ YG+G +SGF                 F  +  E      LA FDGI+GL +  ++V    PV+D +W
Sbjct:   54 HKHADSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYC-SSPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLVDRNQAFGLSVEEPDKILELATFDGILGLSYPSLSVKGVTPVFDNLW 201          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20
Identity = 50/133 (37.59%), Postives = 75/133 (56.39%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPV 689
            P  N++D+ YFGEI IG+PPQNF ++FDTGSSNLWVPS+ C  S +C  H+R+   +S+TY    ++  + YG GS++                   F  +  E +  F  + FDGI+G+ +  +AV +   V
Sbjct:   65 PFTNYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ-SQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAVDNGPTV 196          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19
Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  264 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEA--TREGSLTFLLARFDGIIGLGFREIAVGDAVPV 689
            LG S+++I  L +F +  ++G+  +G   Q F+ I DTGS+NLWVPS KC  +  C     Y S KS TY + G   E+NY SG++SGFFS+              FIE   T     T+  + FDGI+GLG++++++G   P+
Sbjct:  123 LGSSNDNI-ELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-TTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSK-DLVTVGNLSLPYKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPI 263          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19
Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = 3
Query:  270 DSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            D D    PL+N++D  Y G I IG+PPQ F V+ DTGS++LWVPS  C  S +C  H+ +    S+T+   G+   I YGSG +SGF +               F  + +E       A FDGI+GL +  ++     PV+D +W
Sbjct:   58 DPDVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYC-SSPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLAYDTVQIAGLVDVAQAFGLSLQEPGKFMEYAVFDGILGLSYPSLSFEGITPVFDNLW 201          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.614e-19
Identity = 60/141 (42.55%), Postives = 69/141 (48.94%), Query Frame = 3
Query:  270 DSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVW 692
            DS   ++ L N  D  YFGEIGIG+PPQ F+VIFDTGSS LWVPSSK         HS Y+S  S+TY E                                  FIEAT E    FL   FDGI+GL F+ I    +VPVW
Sbjct:    1 DSGSTVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSYLWVPSSKA--------HSMYESSDSSTYKE--------------------------------QDFIEATEEADNVFLNRLFDGILGLSFQTI----SVPVW 97          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.638e-19
Identity = 60/141 (42.55%), Postives = 70/141 (49.65%), Query Frame = 3
Query:  270 DSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVW 692
            DS   ++ L N  D  Y+GEIGIG+PPQ F+VIFDTGSS LWVPSSK         HS Y+S  S+TY                    SQ              FIEAT E    FL   FDGI+GL F+ I    +VPVW
Sbjct:    2 DSGSAVVALTNDRDTSYYGEIGIGTPPQKFTVIFDTGSSVLWVPSSKA--------HSMYESSGSSTYK-------------------SQDSVTIGDLVVKEQDFIEATEEADNVFLNRLFDGILGLSFQTI----SVPVW 111          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18
Identity = 60/141 (42.55%), Postives = 69/141 (48.94%), Query Frame = 3
Query:  270 DSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVW 692
            DS   ++ L N  D  YFGEIGIG+PPQ F+VIFDTGSS LWVPSSK         HS Y+S  S+TY E                                  FIEAT E    FL   FDGI+GL F+ I    +VPVW
Sbjct:    1 DSGSAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKA--------HSMYESSGSSTYKE--------------------------------QDFIEATDETDNVFLHRLFDGILGLSFQTI----SVPVW 97          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PAG1_BOVIN (Pregnancy-associated glycoprotein 1 OS=Bos taurus GN=PAG1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.740e-17
Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL+N  D  Y G I IG+PPQ F V+FDT SS+LWVPS  C  S +C  H R++  +S+T+    K+  I YGSG + G                  F  +  E      +  +DG++GL +  I+   A+P++D
Sbjct:   62 PLRNIKDLVYMGNITIGTPPQEFQVVFDTASSDLWVPSDFC-TSPACSTHVRFRHLQSSTFRLTNKTFRITYGSGRMKGVVVHDTVRIGNLVSTDQPFGLSIEEYGFEGRI--YDGVLGLNYPNISFSGAIPIFD 193          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.084e-17
Identity = 49/136 (36.03%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  288 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            L L N++D  Y G I IG+PPQ FSVIFDT SS+LWVPS++C+ S +C  H  +    S+T+    ++ ++   SG +SG                  F  +  E       A FDG++GLG+  +A+    PV+D
Sbjct:   66 LRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCH-SRACVTHRSFNPTLSSTFQSSNRTVKLAPHSGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFD 200          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 3
Query:  273 SDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSIS--CYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            S+  I PL+N MD  Y G I IG+PPQ F V+FDTGSS+L VPS  C       C    ++K  +S+T+     +  I +GSG++ GF +               F     E   ++L   FDGI+GL + +I+   A+P++D
Sbjct:   56 SNLTIHPLRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINCLSPTKRPCSKQDKFKHHQSSTFRFTNDTFRIYFGSGTMRGFVAHDTVRIGDLVSTDQPFGLIFLE---SWLDIPFDGILGLNYPKISFSGAIPIFD 195          
The following BLAST results are available for this feature:
BLAST of FC931146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
PAG_HORSE1.424e-2136.24Pregnancy-associated glycoprotein OS=Equus caballu... [more]
PEPB_CANFA1.205e-2037.59Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
PLM2_PLAFA1.740e-1938.19Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]
PEPAF_RABIT5.064e-1936.55Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
CARDG_CYNCA6.614e-1942.55Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDF_CYNCA8.638e-1942.55Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDH_CYNCA4.287e-1842.55Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PAG1_BOVIN4.740e-1735.56Pregnancy-associated glycoprotein 1 OS=Bos taurus ... [more]
PAG1_PIG8.084e-1736.03Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
PAG1_SHEEP2.352e-1635.66Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]

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Properties
Property NameValue
Genbank descriptionC34102A02EF PostHarvP1 Citrus clementina cDNA clone C34102A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931146 ID=FC931146; Name=FC931146; organism=Citrus clementina; type=EST; length=710bp
GGAAGTACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGA
AAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTT
ATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTAC
GGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCT
GCAAGAATAACAAAAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGG
CGTGCACCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGA
ACTTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCA
CAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCC
ATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACA
AGTCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATA
AACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGA
AGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAG
AAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTT
GGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACATATG
GTTGAGCAGG
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