FC931149

Overview
NameFC931149
Unique NameFC931149
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HSFA5_ORYSJ (Heat stress transcription factor A-5 OS=Oryza sativa subsp. japonica GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.651e-27
Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 3
Query:  477 PAPFLMKTYQLVDDPSTDDVISWNE-SGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            PAPFL+KTY++VDDPSTD V+SW++ S A+F+VW   +FA  LLP YFKH+NFSSF+RQLNTYGFRKI  E+W FANE F
Sbjct:   19 PAPFLLKTYEMVDDPSTDAVVSWSDASDASFVVWNHPEFAARLLPAYFKHSNFSSFIRQLNTYGFRKIDPERWEFANEYF 98          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HFA4A_ARATH (Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.651e-27
Identity = 52/89 (58.43%), Postives = 70/89 (78.65%), Query Frame = 3
Query:  447 NRERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            N   ++  S+P PFL KTY++VDD S+D ++SW++S  +FIVW   +F++DLLP +FKHNNFSSF+RQLNTYGFRK   EQW FAN++F
Sbjct:    4 NNHGVSSSSLP-PFLTKTYEMVDDSSSDSIVSWSQSNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNTYGFRKADPEQWEFANDDF 91          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.130e-26
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 3
Query:  477 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            PAPFL+KTY++VDD STD ++SW+ +  +FIVW  A+F++ LLP YFKHNNFSSF+RQLNTYGFRKI  E+W F N++F
Sbjct:   21 PAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDF 99          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HFA7A_ARATH (Heat stress transcription factor A-7a OS=Arabidopsis thaliana GN=HSFA7A PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 50/81 (61.73%), Postives = 64/81 (79.01%), Query Frame = 3
Query:  471 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            + P PFL KT+++VDDP+TD ++SWN  G +F+VW    F+  LLP +FKH+NFSSF+RQLNTYGFRKI AE+W FANE F
Sbjct:   25 NAPPPFLTKTFEMVDDPNTDHIVSWNRGGTSFVVWDLHSFSTILLPRHFKHSNFSSFIRQLNTYGFRKIEAERWEFANEEF 105          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HFA4B_ORYSJ (Heat stress transcription factor A-4b OS=Oryza sativa subsp. japonica GN=HSFA4B PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 3
Query:  483 PFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            PFL KTY++VDDPSTD V+ W  +G +F+V    +F +DLLP YFKHNNFSSFVRQLNTYGFRK+  EQW FANE+F
Sbjct:   12 PFLSKTYEMVDDPSTDAVVGWTPAGTSFVVANQPEFCRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPEQWEFANEDF 88          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.517e-26
Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 3
Query:  471 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            + P PFL KTY +VDD +TD ++SW+ +  +FIVWK  +FA+DLLP  FKHNNFSSFVRQLNTYGFRK+  ++W FANE F
Sbjct:   33 NAPPPFLSKTYDMVDDHNTDSIVSWSANNNSFIVWKPPEFARDLLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGF 113          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HFA7B_ARATH (Heat stress transcription factor A-7b OS=Arabidopsis thaliana GN=HSFA7B PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.324e-26
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 3
Query:  465 QRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            Q + P+PFL KT+++V DP+T+ ++SWN  G +F+VW    F+  +LP YFKHNNFSSFVRQLNTYGFRKI AE+W F NE F
Sbjct:   22 QEAGPSPFLTKTFEMVGDPNTNHIVSWNRGGISFVVWDPHSFSATILPLYFKHNNFSSFVRQLNTYGFRKIEAERWEFMNEGF 104          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.565e-26
Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 3
Query:  471 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            SVP PFL KTY +VDDP T++V+SW+    +F+VW   +F+K LLP YFKHNNFSSFVRQLNTYGFRK+  ++W FANE F
Sbjct:   24 SVP-PFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGF 103          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HFA2A_ORYSJ (Heat stress transcription factor A-2a OS=Oryza sativa subsp. japonica GN=HSFA2A PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25
Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 3
Query:  477 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            P PFL KTY++VDDP TD VISW  +G +F+VW    FA  LLP YFKH+NFSSFVRQLNTYGFRK+  ++W FANE F
Sbjct:   51 PPPFLCKTYEVVDDPGTDTVISWGFAGNSFVVWDANAFAAVLLPRYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGF 129          
BLAST of FC931149 vs. ExPASy Swiss-Prot
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.200e-25
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 3
Query:  477 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVAEQWGFANENF 713
            P PFL KTY LV+DP+TD V+SW+ +G +F+VW    FA  LLP  FKHNNFSSFVRQLNTYGFRK+  ++W FANE F
Sbjct:   40 PPPFLTKTYDLVEDPATDGVVSWSRAGNSFVVWDPHVFADLLLPRLFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGF 118          
The following BLAST results are available for this feature:
BLAST of FC931149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
HSFA5_ORYSJ8.651e-2768.75Heat stress transcription factor A-5 OS=Oryza sati... [more]
HFA4A_ARATH8.651e-2758.43Heat stress transcription factor A-4a OS=Arabidops... [more]
HSFA5_ARATH1.130e-2664.56Heat stress transcription factor A-5 OS=Arabidopsi... [more]
HFA7A_ARATH1.476e-2661.73Heat stress transcription factor A-7a OS=Arabidops... [more]
HFA4B_ORYSJ1.476e-2667.53Heat stress transcription factor A-4b OS=Oryza sat... [more]
HFA1D_ARATH2.517e-2662.96Heat stress transcription factor A-1d OS=Arabidops... [more]
HFA7B_ARATH7.324e-2660.24Heat stress transcription factor A-7b OS=Arabidops... [more]
HFA1B_ARATH9.565e-2664.20Heat stress transcription factor A-1b OS=Arabidops... [more]
HFA2A_ORYSJ1.632e-2565.82Heat stress transcription factor A-2a OS=Oryza sat... [more]
HFA2C_ORYSJ6.200e-2564.56Heat stress transcription factor A-2c OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionC34102A05EF PostHarvP1 Citrus clementina cDNA clone C34102A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931149 ID=FC931149; Name=FC931149; organism=Citrus clementina; type=EST; length=717bp
GTCTCTTTTATTTAATTTTTGTTTGATCGTTTATTAATTTATTTTGTTGC
GTTTCTCAAAATTTCTAGAACCCGCGTCACTTTCCTTTCCAATCTCTCTT
TATAAGAGACCCGTGCAAGAATTAACAAAGAGAACGTTTCGAATATTTTT
CAGAGAAGTTATGGTCTTTGCTCATCTAGCCGAAGGACTGGTTAGATTGG
CGATTGCTCATGGAAGCACATAGGAGCAAACGTAGTGGCAATATTTTTCT
TTCTGGGTTTTATTGCTGGGGCTGGGAATTCTTGACTGCCCTCTTGCTCT
TTAGTTGCTCCGTCTAGACCCCAAAAATATATTCATCTCACAAATTAAAG
TAGTAGGTGTTAGAGGGTTTCGAGATTTTCATTCAAGTGTAATTATTTTT
GTTTTTCTCAAAAAGGGTAGTGATTTTGGGGGGTTGGTGAGGGGCAAATC
GGGAAAGAATGGCGCAGAGGTCGGTTCCGGCGCCGTTCCTGATGAAGACG
TACCAGTTGGTGGATGATCCGAGCACTGATGATGTGATATCGTGGAATGA
AAGTGGCGCCACTTTTATTGTCTGGAAAACTGCTGATTTTGCCAAGGATC
TGCTGCCTAATTACTTCAAGCACAACAATTTTTCAAGCTTTGTCCGCCAA
CTCAATACTTATGGATTTCGGAAAATCGTGGCCGAACAATGGGGATTCGC
CAACGAGAACTTCCGTC
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