FC931155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.655e-16 Identity = 37/86 (43.02%), Postives = 48/86 (55.81%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPI 537 CD C +YCRADSA LC CD VH+AN L+ +H R ++C +C P F C D LC CD + H + ++ H RVPI Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.161e-16 Identity = 36/86 (41.86%), Postives = 48/86 (55.81%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPI 537 CD C +YC ADSA LC CD VH+AN ++ +H R ++C +C S P F C D LC CD + H + ++ H RVPI Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGF 546 CD C A L+CRAD+A LC CD +H+AN L+ +H R +C+ C P C D LC CD D H + +S H+RVPI F Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPF 96
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGF 546 CD C A ++CR DSA LC+ CD +HS +H R +C+ C P C D LC CD D H + +++ H+RVP+E F Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETF 106
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = 1 Query: 274 VPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIR------------SQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEG 543 + CD C + A ++C AD A LC CDH VH AN L+ KH+R S +CD C+ + C D +LC++CD H + + HDR + G Sbjct: 3 IRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTG 104
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 1 Query: 274 VPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQI---------CDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDR 528 + CD C A + C AD A LC CD +H+AN L+ KH R + CD C+ + C D +LC++CD H + S SA H R Sbjct: 3 IQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQR 96 The following BLAST results are available for this feature:
BLAST of FC931155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931155 ID=FC931155; Name=FC931155; organism=Citrus clementina; type=EST; length=678bpback to top |