FC931159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 79/236 (33.47%), Postives = 113/236 (47.88%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 G + A KL + I+A + R N D L ++V +G V + G AR ++ AG+P + TVN++C S ++A+ ASQSI G DV V GG+E M GH ++ G+ L + V S MG AE+ + H ITRE QD F V S + A G + EIVP+E G + + DE + + ++KLRP F GTVTAG + Sbjct: 24 GQFRHVRAEKLSAQLIQALMARNPNWDIQLTEDVIWGCVNQTKEQGMNIARNISMLAGLPRTSAAQTVNRLCGSSMQALHSASQSIMTGNGDVFVIGGVEHM----------------GHVAMDHGIDLNPEMSKVTAKASNMMGLTAEMLGKMHGITREQQDAFGVRSHKLAWEATQQGRWDNEIVPIEGHDQNGH-KVLCEIDEVIRPGASIEDMQKLRPVFDPANGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 69/212 (32.55%), Postives = 103/212 (48.58%), Query Frame = 2 Query: 80 KRANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 + V+PS ++++++G V G AR AAL AG+P + TVN++C S ++A+ +++I G ++ + GG+E M + P H + GM MG AE+ + H I+RE QD+FA S R AA G F EI+P E A G T+ D DE + + L +LRP F GTVTAG + Sbjct: 41 RNPQVNPSEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDGARAIMTGDAEICLIGGVEHMGHVPMNHGVDFHPGMSKHVAKAAGM-------------MGLTAEMLGKLHGISREQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DHDEVIRPETTVEGLSQLRPVFDPANGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 79/243 (32.51%), Postives = 116/243 (47.74%), Query Frame = 2 Query: 2 PMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 PMG G + + A + + I L+R VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L+ MG AE+ + H ITRE QD F V S + A G F EI+P++ G T D DE + + L L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAEDMSAHLISKLLERNTKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKTF-DYDETIRPETTLESLAALKPAFNPKGGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 79/243 (32.51%), Postives = 117/243 (48.15%), Query Frame = 2 Query: 2 PMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 PMG G + + A + + I L+R A VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L+ MG AE+ + H ITRE QD F V S + A G F EI+P++ G + D DE + + L L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAEDMSAHLISKLLERNAKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQGYDENGF-LKLFDYDETIRPETTLESLAALKPAFNPKGGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 78/235 (33.19%), Postives = 113/235 (48.09%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTI--VDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 G + A L + + + L R +VDP+ + ++++G V G AR AAL A IP+SV TTVN++C S ++A+ A+++I +G + GG+E M + P + + GM MG AE+ A H I+RE QD FA S +R AA AG FA EIV V G + D DE + + L LRP+F GTVTAG++ Sbjct: 20 GAFRHVRAEDLSAHLMRSLLSRNPSVDPATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPATTVNRLCGSSMQALHDAARAIMVGDARTCLIGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDRFAARSHQRAAAATQAGHFAAEIVAV---CGHDADGVLKRYDADEVIRPETTVESLMALRPAFDPVDGTVTAGSS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18 Identity = 80/240 (33.33%), Postives = 116/240 (48.33%), Query Frame = 2 Query: 2 PMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 PMG G ++ A L + ++ L R ++P +++V +G V G AR A+L AG+P S+ TVN++C S ++A+ AS SI G DV + GG+E M + P + +D D L + +MG AEL +QH ITRE QD F S ++ A AG + EIV + G T+V+ DE + A+ L LRP F GTVTAG + Sbjct: 13 PMGRSKAGVFRNVRAEALSAHLMKQILVRNPALNPEDIEDVIWGCVKQTKEQGFNIARNASLLAGLPKSIGGVTVNRLCGSSMEALHQASTSIMSGQGDVFLIGGVEHMGHVP-----------MMYDVDFDPALNKNI--ALASGNMGLTAELLGKQHGITREMQDAFGARSHQKAHEAHLAGRWDNEIVATQGHDATG-ALTLVEHDEVIRPETTAESLSALRPVFDPVNGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18 Identity = 76/243 (31.28%), Postives = 115/243 (47.33%), Query Frame = 2 Query: 2 PMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 PMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M GH ++ G+ + L+ MG AE+ + H I+RE QD F S + A G F EI+P+E G + D DE + + L +L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPMEGYDENGF-LKVFDFDETIRPETTVETLAELKPAFNPKGGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18 Identity = 76/243 (31.28%), Postives = 115/243 (47.33%), Query Frame = 2 Query: 2 PMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 PMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M GH ++ G+ + L+ MG AE+ + H I+RE QD F S + A G F EI+P+E G + D DE + + L +L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPMEGYDENGF-LKVFDFDETIRPETTVETLAQLKPAFNPKGGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18 Identity = 76/243 (31.28%), Postives = 115/243 (47.33%), Query Frame = 2 Query: 2 PMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 PMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M GH ++ G+ + L+ MG AE+ + H I+RE QD F S + A G F EI+P+E G + D DE + + L +L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPMEGYDENGF-LKVFDFDETIRPETTVETLAQLKPAFNPKGGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18 Identity = 80/242 (33.06%), Postives = 116/242 (47.93%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK----------LRKLRPSFKENGGTVTAGNA 709 G + A L + + + L R +D + ++++G V A G AR AAL A IP SV TTVN++C S ++A+ A+++I +G +V + GG+E M + P G H L + K MG AE+ A H+I+RE QD FA S +R A +GAF EIVP +AG D D L +FD + L L+P+F GTVTAG++ Sbjct: 20 GAFRQVRAEDLSAHLMRSLLSRNTALDAREIDDIYWGCVQQALEQGFNVARNAALLAEIPVSVPATTVNRLCGSSMQALHDAARAIMVGDANVCLIGGVEHMGHVPM-----NHGVDF-HPGLSRTIAKAA-------GMMGLTAEMLARMHNISREMQDQFAARSHQRAYHATQSGAFRHEIVP---TAGH-------DADGALQRFDYDEVIRPDTTIDSLAALKPAFDPVNGTVTAGSS 238 The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bpback to top |