FC931159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18 Identity = 70/212 (33.02%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 80 KRANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 + V+P ++++++G V G AR AAL AG+P + TVN++C S ++A+ A+++I +G ++ + GG+E M + P G H L + K MG AE+ + H I+R+ QD+FA S R AA G F EI+P E A G T+ D DE + + A L +LRP F GTVTAG + Sbjct: 41 RNPQVNPKEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEHMGHVP-----MTHGVDF-HPGLSKNVAKAA-------GMMGLTAEMLGKLHGISRQQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DYDEVIRPETTVAGLAELRPVFDPANGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18 Identity = 70/212 (33.02%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 80 KRANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 + V+P ++++++G V G AR AAL AG+P + TVN++C S ++A+ A+++I +G ++ + GG+E M + P G H L + K MG AE+ + H I+R+ QD+FA S R AA G F EI+P E A G T+ D DE + + A L +LRP F GTVTAG + Sbjct: 41 RNPQVNPKEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEHMGHVP-----MTHGVDF-HPGLSKNVAKAA-------GMMGLTAEMLGKLHGISRQQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DYDEVIRPETTVAGLAELRPVFDPANGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: ECHB_MOUSE (Trifunctional enzyme subunit beta, mitochondrial OS=Mus musculus GN=Hadhb PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17 Identity = 72/236 (30.51%), Postives = 110/236 (46.61%), Query Frame = 2 Query: 50 LGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 L A+ L R N+ +V + FG V+ AR+AALGAG + TV C S +A+ A I G DV+VAGG+E MS+ P K + + K LG + + + + + +MG A+ A +++R QD++A+ S AQD G + +IVP +V GK + V KD G+ ++ KL+P+F + GTVTA N+ Sbjct: 80 LARAALSGLLHRTNIPKDVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLGQRLSLLSKFRLNFLSPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDEYALRSHSLAKKAQDEGHLS-DIVPFKVP---GKDT--VTKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANS 309
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17 Identity = 77/233 (33.05%), Postives = 115/233 (49.36%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 G + A L + + A L R ++D + + ++++G V G AR A+L A IP+SV TVN++C S ++A+ A+++I +G V + GG+E M + P G H L + K MG AE+ A+ H+I+R+ QD+FA S +R AA AG F EI+P G T D DE + + A L LRP+F GTVTAG + Sbjct: 20 GAFRQVRAEDLSAHLMRAVLSRNPSLDAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDAARAIMVGDAHVSLIGGVEHMGHVPM-----NHGVDF-HPGLSRSVAKAA-------GMMGLTAEMLAKMHNISRQMQDEFAARSHQRAHAATLAGYFKNEIIPTTGHDADG-VLTRYDFDEVIRPETTVASLAALRPAFDPVNGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17 Identity = 78/242 (32.23%), Postives = 114/242 (47.11%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFD----------PAKLRKLRPSFKENGGTVTAGNA 709 G + A L + + + L R A +D + ++++G V G AR AAL A IP +V TTVN++C S ++A+ A+++I +G DV + GG+E M + P G H L + K MG AE+ H+I+RE QD FA S +R A +GAF EI+P +AG D D L +FD L L+P+F GTVTAG++ Sbjct: 20 GAFRQVRAEDLSAHLMRSLLSRNAALDAREIDDIYWGCVQQTLEQGFNVARNAALLAEIPMNVPATTVNRLCGSSMQALHDAARTIMVGDADVCLIGGVEHMGHVPM-----NHGVDF-HPGLSRTIAKAA-------GMMGLTAEMLGRMHNISREMQDQFAARSHQRAHHATQSGAFRHEIIP---TAGH-------DADGALQRFDYDEVIRPDTTVDSLAALKPAFDPVNGTVTAGSS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17 Identity = 78/243 (32.10%), Postives = 115/243 (47.33%), Query Frame = 2 Query: 2 PMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 PMG G + + A + + I L+R + VDP V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F V S + A G F EI+P++ G + D DE + + L L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQGYDENGF-LKVFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17 Identity = 77/236 (32.63%), Postives = 110/236 (46.61%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHD---SLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + ++ KR NVD V+++ +G V + G AR +L AG+P + TVN++C S + AI A+Q+I G DV V GG+E M + G G D +L M K + MG AE+ + H ++RE+QD FAV S A G F EIV +E G +V+ DE + + L KL P F GTVTAG + Sbjct: 24 GVFRNVRAENLSAALVKELFKRNPNVDQKDVEDLIWGCVNQTLEQGFNMARAVSLLAGLPITCAAQTVNRLCGSSMSAIHTAAQAIMTGQGDVFVVGGVEHMGHV---------GMMHGVDVNPALSKHMAKASM-------MMGVTAEMLGKMHGVSREDQDAFAVRSHRLAHEATLQGRFNNEIVSIEGHDADGN-KILVEVDEVIRPETSMESLAKLAPVFMPKVGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17 Identity = 71/232 (30.60%), Postives = 109/232 (46.98%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G A L + ++ L+R VDP ++++++G V G AR +AL AGIP+ V TVN++C S ++A+ A+++I G D+ +AGG+E M + P G H + + K SMG AEL + + ITRE QD+F S + A G FA EI + G+ + + + + L +LRP F GTVTAG + Sbjct: 20 GVFRHTRAEDLSAALMKGLLERNPEVDPEELEDIYWGCVQQTLEQGFNIARNSALIAGIPHKVAGVTVNRLCGSSMQALHDATRAIMNGDGDIFMAGGVEHMGHVPM-----THGIDF-HPGMNKSVAKAS-------GSMGMTAELLSRKFGITREQQDEFGARSHRKAHEATVEGRFAKEIYAMNGHNADGELVRVTEDEVIRPETTAEGLSQLRPVFDPANGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEU5 (3-ketoacyl-CoA thiolase OS=Pseudomonas stutzeri (strain A1501) GN=fadA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.779e-17 Identity = 77/243 (31.69%), Postives = 114/243 (46.91%), Query Frame = 2 Query: 2 PMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 PMG G + + A + + I+ L R +DP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A Q+IQ DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F S + A G F EI+P+E G + D DE + + L +L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAETMSAQLIDGLLARNPKIDPAEVEDVIWGCVNQTLEQGWNIARMASLLTRIPHTSAGQTVSRLCGSSMSALHTAVQAIQTNNGDVFVIGGVEHM----------------GHVSMMHGVDPNPQLSLHAAKASGMMGLTAEMLGKMHGITREAQDQFGYRSHQLAWKATQEGKFKDEIIPMEGHDENGF-LKVFDYDETIRPETTLEGLAELKPAFNPKGGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.779e-17 Identity = 77/243 (31.69%), Postives = 114/243 (46.91%), Query Frame = 2 Query: 2 PMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 PMG G + + A + + I L+R VDP V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F + S + A G F EI+P++ G + D DE + + L L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQGYDENGF-LKVFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTS 242 The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bpback to top |