FC931159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.084e-17 Identity = 75/233 (32.19%), Postives = 109/233 (46.78%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 G + A L + + + L R ++ S + ++++G V G AR AAL A IP+SV TVN++C S ++A+ A++ I G V + GG+E M + P G H L + K MG AE+ + H I+RE QD FA S +R AA AG F EI+P G D DE + A+ L +L+P+F GTVTAG + Sbjct: 20 GAFRQVRAEDLSAHLMRSLLSRNPQLEASAIDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDASVCLVGGVEHMGHVP-----MNHGVDF-HPGLSRNVAKAA-------GMMGLTAEMLSRMHGISREMQDAFAARSHQRAWAATQAGHFKQEIIPTSGHDADGVLKR-YDFDEVIRPETTAEGLSQLKPAFDPANGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSYCK (3-ketoacyl-CoA thiolase OS=Psychrobacter cryohalolentis (strain K5) GN=fadA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16 Identity = 71/236 (30.08%), Postives = 111/236 (47.03%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE--VSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G + A + + + A ++R + DP V+++ +G V + G R L AGIP + T+N++C S ++A+ A+ I G DV + GG+E M GH ++ G+ L Y S MG AE+ ++ITRE QD F + S R AA G F EI+ +E AGR + T+ + + +++KLRP+F GGTVTA + Sbjct: 25 GMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTINRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHM----------------GHVGMMHGVDLNPEASKHYAKASNMMGLTAEMLGRMNNITREEQDAFGLESHRRAWAATTEGRFDNEIIGIEGHDEAGRLQLCTVDEVIRPDATME--QMQKLRPAFDPVGGTVTAATS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16 Identity = 76/243 (31.28%), Postives = 114/243 (46.91%), Query Frame = 2 Query: 2 PMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 PMG G + + A + + I L+R A +DP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A Q+IQ G DV V GG+E M GH ++ G+ + L+ MG AE+ + H I+RE QD F S A G F EI+P++ G + D DE + + L L+P+F GGTVTAG + Sbjct: 17 PMGRSKGGMHRNTRAETMSAHLISKVLERNAKIDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAVQAIQTGNGDVFVVGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDAFGERSHRLAHKATVEGKFKDEIIPMQGYDENGF-LKVFDYDETIRPETTLESLATLKPAFNPKGGTVTAGTS 242
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: ECHB_BOVIN (Trifunctional enzyme subunit beta, mitochondrial OS=Bos taurus GN=HADHB PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16 Identity = 71/236 (30.08%), Postives = 108/236 (45.76%), Query Frame = 2 Query: 50 LGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 L A+ L R +V +V + FG V+ AR+AALGAG + TV C S +A+ A I G DV+VAGG+E MS+ P K + + K L + + + + +MG A+ A +I+RE QD++A+ S AQD G + ++VP +V GR V +D G+ ++ KL+P+F + GTVTA N+ Sbjct: 80 LARAALSGLLHRTSVPKDVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDIPIRHSRKMRKMMLDLNKAKTLAQRLSIISKFRLNFLSPELPAVSEFSTSETMGHSADRLAAAFAISREEQDEYALRSHSLAKKAQDEGLLS-DVVPFKV-PGR----DTVTQDNGIRPSSLDQMAKLKPAFIKPYGTVTAANS 309
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadI PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 76/247 (30.77%), Postives = 111/247 (44.94%), Query Frame = 2 Query: 29 SSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA-----------RKGSRLGHDSLVD-GMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWE--IVPVEVSAGRGKPSTI-VDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 S+ A LG +A++A + + ++DP L+ +V FG V+ AR+ LG G+ +V + CA+ + +SI G D+ +AGG +S S P K LA +K S L SL D + + + SMG AE A+ H ITRE QD A S A AW+ ++ EV +P T +D D + D A KLRP+F G+VTA N+ Sbjct: 39 STTPAVDLGKLAVKALMDKTDIDPKLIDQVVFGQVVQMPEAPNIAREIVLGTGMNIGTDAYSVTRACATSFQTTANVVESIMAGTIDIGIAGGADSSSVLPIGVSKKLASTLLALSKTKTVYQKLSLLRTLSLKDIAPVPPAVAEYSTGISMGQTAEQMAKSHGITREEQDALAHRS-------HTLAAKAWKDGLIQDEVMTAFPEPYTAWLDHDNNIRHDSDLASYAKLRPAFDHKYGSVTAANS 278
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: ECHB_RAT (Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus GN=Hadhb PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 74/236 (31.36%), Postives = 110/236 (46.61%), Query Frame = 2 Query: 50 LGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHD-SLVDGMLKDGLW-------DVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 L A+ L R N+ +V + FG V+ AR+AALGAG + TV C S +A+ A I G DV+VAGG+E MS+ P K + + K L SL+ + L + + +MG A+ A +++R QD +A+ S AQD G + +IVP +V GK + V KD G+ ++ KL+P+F + GTVTA N+ Sbjct: 80 LARAALSGLLYRTNIPKDVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLAQRLSLLTKFRLNFLSPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDKYALRSHSLAKKAQDEGHLS-DIVPFKVP---GKDT--VSKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANS 309
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: ECHB_PANTR (Trifunctional enzyme subunit beta, mitochondrial OS=Pan troglodytes GN=HADHB PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16 Identity = 70/236 (29.66%), Postives = 108/236 (45.76%), Query Frame = 2 Query: 50 LGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 L A+ L R +V +V + FG V+ AR+AALGAG + TV C S +A+ I G DVIVAGG+E MS+ P K + + K +G + + + + +MG A+ A +++R QD++A+ S AQD G + ++VP +V GK + V KD G+ ++ KL+P+F + GTVTA N+ Sbjct: 80 LARAALTGLLHRTSVPKEVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAGGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPELPAVSEFSTSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLS-DVVPFKVP---GKDT--VTKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANS 309
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: ECHB_HUMAN (Trifunctional enzyme subunit beta, mitochondrial OS=Homo sapiens GN=HADHB PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16 Identity = 70/236 (29.66%), Postives = 108/236 (45.76%), Query Frame = 2 Query: 50 LGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 L A+ L R +V +V + FG V+ AR+AALGAG + TV C S +A+ I G DVIVAGG+E MS+ P K + + K +G + + + + +MG A+ A +++R QD++A+ S AQD G + ++VP +V GK + V KD G+ ++ KL+P+F + GTVTA N+ Sbjct: 79 LARAALTGLLHRTSVPKEVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAGGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPELPAVSEFSTSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLS-DVVPFKVP---GKDT--VTKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANS 308
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadI PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16 Identity = 69/240 (28.75%), Postives = 107/240 (44.58%), Query Frame = 2 Query: 41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGH--DSLVDGMLKD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGK-FDPAKLRKLRPSFKENGGTVTAGNA 709 A LG + + L R ++DP L+ ++ FG V+ AR+ LG G+ + +V++ CA+ +A+ ++SI G D+ +AGG +S S P + L + K L + L LKD + + SMG AE A+ H I+RE QD A S A G + E+ V + +++D + + D A KL+P F GTVTA NA Sbjct: 37 AVDLGKLVVSELLARTSLDPKLIDQLVFGQVVQMPEAPNIAREIVLGTGMSVTTDAYSVSRACATSFQAVANVTESIMAGTVDIAIAGGADSSSVLPIGVSKKLARALVDLNKARNLQQRFNILRALRLKDLMPVPPAVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAAQAWADGKLSGEVFTAHVPPYKSP----LERDNNIRESSDLASYAKLKPVFDRVHGTVTAANA 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16 Identity = 68/234 (29.06%), Postives = 105/234 (44.87%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G + A + + + A ++R + DP V+++ +G V + G R L AGIP + TVN++C S ++A+ A+ I G DV + GG+E M GH ++ G+ L Y S MG AE+ ++ITRE QD F + S R AA G F EI+ +E G+ + +++KLRP+F GTVTA + Sbjct: 25 GMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTVNRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNNITREEQDAFGLESHRRAWAATTEGRFDNEIIGIEGHDAAGRLQLCTVDEVIRPDATMEQMQKLRPAFDPVSGTVTAATS 242 The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bpback to top |