FC931159

Overview
NameFC931159
Unique NameFC931159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadI PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 68/241 (28.22%), Postives = 107/241 (44.40%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHD-SLVDGMLKDGLWDV-------YNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA--KLRKLRPSFKENGGTVTAGNA 709
            A +LG +     L R  +DP L++ + FG V+        AR+  LG G+       +V++ CA+  +A+   ++SI  G  +V +AGG +S S  P        + L +  K   LG    L+ G+    L  V            MG  AE  A+ + ITRE QD+ A  S +    A ++G    E++   V      P      ++   + D A  +  +LRP+F    GTVTA N+
Sbjct:   37 ALELGKLVTSELLVRTGIDPELIELLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIMAGTVEVGIAGGADSSSVLPIGVSKALARTLVDMNKARTLGQKLKLLSGLRPKDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGITREEQDELAHRSHKLAAQAWESGVLRDEVMTAYV-----PPYEKALSEDNNVRHDSALEQYSRLRPAFDRRHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 74/233 (31.76%), Postives = 113/233 (48.50%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G    + A  L +  +   L R   ++ + + ++++G V      G   AR A+L A IP+SV   TVN++C S ++A+   +++I +G   V + GG+E M + P           + H   VD     G         MG  AE+ A+ H+I+R++QD+FAV S +R  AA  A  FA EIV        G      D DE +  + + A L  LRP+F    GTVTAG +
Sbjct:   20 GAFRQVRAEDLSAHLMREVLSRNPELNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAQVSLIGGVEHMGHVP-----------MNHG--VDFHPGMGRTVAKAAGMMGLTAEMLAKIHNISRQSQDEFAVRSHQRAYAATQADHFAKEIVATNGHDADGILKRF-DFDEVIRPETNLAGLAALRPAFDPVNGTVTAGTS 238          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 68/241 (28.22%), Postives = 107/241 (44.40%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHD-SLVDGMLKDGLWDV-------YNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA--KLRKLRPSFKENGGTVTAGNA 709
            A +LG +     L R  +DP L++ + FG V+        AR+  LG G+       +V++ CA+  +A+   ++SI  G  +V +AGG +S S  P        + L +  K   LG    L+ G+    L  V            MG  AE  A+ + ITRE QD+ A  S +    A ++G    E++   V      P      ++   + D A  +  +LRP+F    GTVTA N+
Sbjct:   37 AIELGKLVTSELLVRTGIDPELIELLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIMAGTVEVGIAGGADSSSVLPIGVSKALARTLVDMNKARTLGQKLRLLSGLRPKDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGITREEQDELAHRSHKLAAQAWESGVLRDEVMTAYV-----PPYEKALSEDNNVRHDSAIEQYSRLRPAFDRRHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSYWF (3-ketoacyl-CoA thiolase OS=Psychrobacter sp. (strain PRwf-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 67/240 (27.92%), Postives = 102/240 (42.50%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCS---------MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  + +  + A +KR + D + V+++ +G V  +   G    R   L A IP +    TVN++C S ++A+  A+  I     DV + GG+E M                GH  ++ G+      D+  + S         MG  AE+    + ITRE QD+F   S  R  AA  AG F  EI+ +E     G+       +          L KLRP F    GTVTA  +
Sbjct:   25 GMFRNVRADSMSAELVRALVKRNDFDTNEVEDIIWGCVNQTLEQGMNIGRNIGLLADIPKTAGGQTVNRLCGSSMQALHTAAAQIMTNQGDVFIIGGVEHM----------------GHVGMMHGI------DINPEASKHYAKASNMMGLTAEMLGRMNGITREQQDEFGYESHRRAWAATQAGRFDNEIIGIEGHDAEGRLQLCTVDEVIRPDTSMESLAKLRPVFDPANGTVTAATS 242          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 70/232 (30.17%), Postives = 105/232 (45.26%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G    + A  L +  + + L R  +++ S + ++++G V      G   AR AAL A IP+SV   TVN++C S ++A+  A++ I  G   V + GG+E M + P             + +   GM             MG  AE+ A  H I+RE QD FA  S  R  AA  +GAF  EI+P       G   +    +    +     L  L+P+F    GTVTAG +
Sbjct:   20 GAFRHVRAEDLSAHLMRSLLSRNPSLEASAIDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPANTVNRLCGSSMQALHDAARMIMTGDAGVCLIGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARLHGISREMQDQFAARSHARAWAATQSGAFKAEIIPTGGHDADGVLKSFNYDEVIRPETTVETLSTLKPAFDPVTGTVTAGTS 238          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15
Identity = 70/239 (29.29%), Postives = 103/239 (43.10%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +
Sbjct:   25 GMFRNVRADSLSAELVRALIARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDTFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATS 242          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: YKA3_CAEEL (Uncharacterized protein B0303.3 OS=Caenorhabditis elegans GN=B0303.3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15
Identity = 73/242 (30.17%), Postives = 110/242 (45.45%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP-KYLAEARKGSRLGHDSLVD--GMLKDGLWDVYNDCS--------------MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            L A  L   AI+A +++  +    +  +  G V+        AR+AAL AG+P+ +   TV   C S   A+      +  G  + I+AGG+E +S+ P +Y   ARK + LG +   D    LK G   V N  S              MG   +  A   +++R  QD+FA+ S      A   G F  ++VPV +    GK    + +D G+      KL  L+P+F +  GTVTA NA
Sbjct:   46 LMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPIRYNRNARK-AMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFT-DVVPVFLD---GKKPKTIKEDNGIRVSTLEKLSSLKPAFVKPHGTVTAANA 282          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: VRAB_STAAW (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MW2) GN=vraB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 70/235 (29.79%), Postives = 112/235 (47.66%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNA 709
            G + GTL  L   +L     +   ++     S + +V  GNV+    G   AR+A L AG+ +S+   T+++ C SGL+++  A + IQ G   V +AGG+ES S AP    + ++   +   +L +   +       +D SM   AE  A+ + ++RE QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+
Sbjct:   15 GKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGN--GGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP---WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK------GEIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANS 236          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: VRAB_STAAN (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain N315) GN=vraB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 70/235 (29.79%), Postives = 112/235 (47.66%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNA 709
            G + GTL  L   +L     +   ++     S + +V  GNV+    G   AR+A L AG+ +S+   T+++ C SGL+++  A + IQ G   V +AGG+ES S AP    + ++   +   +L +   +       +D SM   AE  A+ + ++RE QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+
Sbjct:   15 GKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGN--GGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP---WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK------GEIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANS 236          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: VRAB_STAAM (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=vraB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 70/235 (29.79%), Postives = 112/235 (47.66%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNA 709
            G + GTL  L   +L     +   ++     S + +V  GNV+    G   AR+A L AG+ +S+   T+++ C SGL+++  A + IQ G   V +AGG+ES S AP    + ++   +   +L +   +       +D SM   AE  A+ + ++RE QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+
Sbjct:   15 GKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGN--GGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP---WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK------GEIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANS 236          
The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
FADI_PECCP1.167e-1528.223-ketoacyl-CoA thiolase OS=Pectobacterium carotovo... [more]
FADA_YERE81.167e-1531.763-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADI_ERWCT1.525e-1528.223-ketoacyl-CoA thiolase OS=Erwinia carotovora subs... [more]
FADA_PSYWF1.525e-1527.923-ketoacyl-CoA thiolase OS=Psychrobacter sp. (stra... [more]
FADA_KLEP71.525e-1530.173-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]
FADA_ACIBT1.991e-1529.293-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
YKA3_CAEEL2.601e-1530.17Uncharacterized protein B0303.3 OS=Caenorhabditis ... [more]
VRAB_STAAW3.397e-1529.79Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAN3.397e-1529.79Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAM3.397e-1529.79Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]

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Properties
Property NameValue
Genbank descriptionC34102B03EF PostHarvP1 Citrus clementina cDNA clone C34102B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bp
ACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCAAGC
TTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGATCCA
TCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCTAGG
ACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATTCAG
TGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCTATA
ATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGTGGC
TGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAGCGA
GAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTTAAA
GATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGCTGA
ACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACTTTG
CTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCCTTT
GCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACCATC
AACCATTGTTGATAAGGATGAAGGTTTAGGCAAGTTTGACCCGGCAAAAT
TGAGGAAGCTTCGACCAAGTTTCAAGGAGAATGGAGGAACTGTTACGGCT
GGCAATGCC
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