FC931159

Overview
NameFC931159
Unique NameFC931159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: VRAB_STAA1 (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=vraB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 70/235 (29.79%), Postives = 112/235 (47.66%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNA 709
            G + GTL  L   +L     +   ++     S + +V  GNV+    G   AR+A L AG+ +S+   T+++ C SGL+++  A + IQ G   V +AGG+ES S AP    + ++   +   +L +   +       +D SM   AE  A+ + ++RE QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+
Sbjct:   15 GKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGN--GGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP---WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK------GEIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANS 236          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 67/240 (27.92%), Postives = 111/240 (46.25%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHD-SLVDGM-LKD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            A  LG I +   L++ +VDP ++ ++ FG V+        AR+  LG G+       +V++ CA+  ++ +  ++SI  G  DV +AGG +S S AP        + L +  K   LG   SL+  + LKD       + +     SMG  AE  A+ + I+R++QD  A  S      +   G  A E++ V     +    + +D+D    +    +   KL+P F    GTVTA  +
Sbjct:   36 AVDLGKIVVNELLQKHDVDPGIIDQLVFGQVVQMPEAPNIAREIVLGTGMNTRTDAYSVSRACATSFQSTVNVAESIMAGHVDVGIAGGADSSSVAPIGVSKKLARTLVDLTKARSLGQRLSLLSRLGLKDLLPVSPAVAEYSTGISMGQTAEQMAKTYQISRQDQDALAHRSHTLATKSWQEGKLAGEVMTVHAEPYK----SFIDRDNCFRENSVLESYAKLKPVFDRKHGTVTAATS 271          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_SALTY (3-ketoacyl-CoA thiolase OS=Salmonella typhimurium GN=fadA PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 75/246 (30.49%), Postives = 108/246 (43.90%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSL----VQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + + L R   +PSL    + ++++G V      G   AR AAL A IP+SV   TVN++C S ++A+  A++ I  G   V + GG+E M + P             + +   GM             MG  AE+ +  H I+RE QD FA  S  R  AA  +GAF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +
Sbjct:   20 GAFRNVRAEDLSAHLMRSLLAR---NPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALSTLRPAFDPVSGTVTAGTS 238          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 75/246 (30.49%), Postives = 108/246 (43.90%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSL----VQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + + L R   +PSL    + ++++G V      G   AR AAL A IP+SV   TVN++C S ++A+  A++ I  G   V + GG+E M + P             + +   GM             MG  AE+ +  H I+RE QD FA  S  R  AA  +GAF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +
Sbjct:   20 GAFRNVRAEDLSAHLMRSLLAR---NPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALSTLRPAFDPVSGTVTAGTS 238          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 75/246 (30.49%), Postives = 108/246 (43.90%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSL----VQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + + L R   +PSL    + ++++G V      G   AR AAL A IP+SV   TVN++C S ++A+  A++ I  G   V + GG+E M + P             + +   GM             MG  AE+ +  H I+RE QD FA  S  R  AA  +GAF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +
Sbjct:   20 GAFRNVRAEDLSAHLMRSLLAR---NPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALSTLRPAFDPVSGTVTAGTS 238          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 75/233 (32.19%), Postives = 110/233 (47.21%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            G    + A  L +  ++   KR   +    + ++++G V      G   AR AAL A IP+SV   TVN++C S ++A+   ++ I  G  +V + GG+E M + P           + H   VD   K  L        MG  AE+ A+ H I+RE QD+FA+ S +R   A  +GAFA EI P+      G      D DE +      K L  LRP F    G+VTAG++
Sbjct:   20 GAFRQVRAEDLSAHLMKKLFKRNPAIQQHEIDDIYWGCVQQTLEQGFNIARNAALLADIPHSVPAVTVNRLCGSSMQALHDGARMIMTGEANVTLIGGVEHMGHVP-----------MTHG--VDFHPKMSLSVAKAAGVMGLTAEMLAKIHHISREMQDEFALRSHQRATQATQSGAFANEISPIYGHDADGILKRF-DYDEVIRSDANLKDLAALRPVFDPVTGSVTAGSS 238          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 70/239 (29.29%), Postives = 103/239 (43.10%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +
Sbjct:   25 GMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATS 242          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 70/239 (29.29%), Postives = 103/239 (43.10%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +
Sbjct:   25 GMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATS 242          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 70/239 (29.29%), Postives = 103/239 (43.10%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +
Sbjct:   25 GMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATS 242          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ACIB5 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 70/239 (29.29%), Postives = 103/239 (43.10%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +
Sbjct:   25 GMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATS 242          
The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
VRAB_STAA13.397e-1529.79Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
FADI_COLP33.397e-1527.923-ketoacyl-CoA thiolase OS=Colwellia psychrerythra... [more]
FADA_SALTY3.397e-1530.493-ketoacyl-CoA thiolase OS=Salmonella typhimurium ... [more]
FADA_SALTI3.397e-1530.493-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fad... [more]
FADA_SALPA3.397e-1530.493-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]
FADA_PHOLL3.397e-1532.193-ketoacyl-CoA thiolase OS=Photorhabdus luminescen... [more]
FADA_ACIBY3.397e-1529.293-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBS3.397e-1529.293-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBC3.397e-1529.293-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIB53.397e-1529.293-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]

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Properties
Property NameValue
Genbank descriptionC34102B03EF PostHarvP1 Citrus clementina cDNA clone C34102B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bp
ACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCAAGC
TTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGATCCA
TCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCTAGG
ACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATTCAG
TGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCTATA
ATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGTGGC
TGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAGCGA
GAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTTAAA
GATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGCTGA
ACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACTTTG
CTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCCTTT
GCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACCATC
AACCATTGTTGATAAGGATGAAGGTTTAGGCAAGTTTGACCCGGCAAAAT
TGAGGAAGCTTCGACCAAGTTTCAAGGAGAATGGAGGAACTGTTACGGCT
GGCAATGCC
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