FC931159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 68/232 (29.31%), Postives = 104/232 (44.83%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E M + P + + GM MG AE+ A H I+RE QD FA S R AA +GAF EI+P G + + L LRP+F GTVTAG++ Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTMEALATLRPAFDPVSGTVTAGSS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ECOL6 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=fadA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 71/243 (29.22%), Postives = 106/243 (43.62%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E M + P + + GM MG AE+ A H I+RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALATLRPAFDPVSGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 71/243 (29.22%), Postives = 106/243 (43.62%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E M + P + + GM MG AE+ A H I+RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALATLRPAFDPVSGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 71/243 (29.22%), Postives = 106/243 (43.62%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E M + P + + GM MG AE+ A H I+RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALATLRPAFDPVSGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ECO57 (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 GN=fadA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 71/243 (29.22%), Postives = 106/243 (43.62%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E M + P + + GM MG AE+ A H I+RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALATLRPAFDPVNGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadI PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 71/243 (29.22%), Postives = 114/243 (46.91%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-STIVDKDEGLGK-FDPAKLRKLRPSFKENGGTVTAGNA 709 +SA +G + + L R+ +DP LV+++ +G V+ AR+ LG G+ + +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ H I+R +QD A S +AAQ +A ++ EV P + ++KD + + D A KLRP F G+VTA N+ Sbjct: 35 VSALDMGKMVVNELLSRSELDPKLVEQLVYGQVVQMPAAPNIAREIVLGTGMNVATDAYSVTRACATSFQSTVNIAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLTKARTFGQKLAIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHGISRADQDAMAHRS--HTLAAQ---TWASGVMKNEVMVAHVPPYNQFIEKDNNIRESSDLASYAKLRPVFDRKHGSVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadI PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 63/244 (25.82%), Postives = 105/244 (43.03%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLG-----------HDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R+ + P+ ++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K LG HD L + + + MG AE A+ + ITRE QD A S +R A G E++ V + + + + + G A +LRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVSELLARSEIPPAAIEQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTLGQRLKLFSRLRLHDLL---PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLTNEVMTAYVPPYK---APLSEDNNIRGNSTLADYARLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 71/243 (29.22%), Postives = 106/243 (43.62%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E M + P + + GM MG AE+ A H I+RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMSGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALATLRPAFDPVSGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 68/232 (29.31%), Postives = 103/232 (44.40%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A IP+SV TVN++C S ++A+ A++ I G + GG+E M + P + + GM MG AE+ + H I+RE QD FA S R AA +GAF EI+P G + + L LRP+F GTVTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEATAIDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQTCLIGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLSRMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFSYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadI PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 65/244 (26.64%), Postives = 113/244 (46.31%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 +SA +G + + + R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K LG + M + GL D+ SMG AE A+ + I+R +QD A S ++G E++ V+ + +D+D + + + KLRP+F G+VTA N+ Sbjct: 35 VSALDMGKMVVNELISRSELDPKLIEQLVYGQVVLMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNVEIGIAGGADSSSVLPITVSKKLAHALVDLNKARTLGQKFAI--MRRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGISRADQDALAHRSHTLATETWNSGNLRDEVMTAHVAPYK----QFIDRDNNIRENSVLESYAKLRPAFDRKHGSVTAANS 272 The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bpback to top |