FC931159

Overview
NameFC931159
Unique NameFC931159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14
Identity = 69/244 (28.28%), Postives = 109/244 (44.67%), Query Frame = 2
Query:   29 SSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP-----------KYLAEARKGSR----LGHDSLVDGM-LKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            + + A  +G + +   L+  + DP L+++V FG V+        AR+  LG G+       +V + CA+  +A    ++SI  G  D+ +AGG +S S  P             L++AR  S+    L   S+ D M +   + +     SMG  AE  A+ H ITR+ QD  A  S      A   G    E+    ++A        +DKD  + +    +   KLRP+F    GTVTA N+
Sbjct:   33 NGVPALDMGKMVVNEMLQELDFDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMHIGTDAYSVTRACATSFQAAANVAESIISGTIDIGIAGGADSSSVLPIGVSKKLAATLLALSKARTMSKRLKLLSTLSVKDLMPVPPAVAEYSTGISMGQTAEQMAKSHGITRQEQDALAYRSHTLAAKAWKDGLIRGEV----MTAFPEPYGQWIDKDNNIREDSTLESYAKLRPAFDRKFGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14
Identity = 76/243 (31.28%), Postives = 112/243 (46.09%), Query Frame = 2
Query:    2 PMGGFLGTL-SSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVD---GMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            PMG   G +  ++ A  L +  +   ++R  N+DP+ ++++ +G V      G   AR A L   IP SV   TVN++C S ++A+  A+  I  G  DV + GG+E M + P              D  +D   G+ K          SMG  AEL   Q+ I+RE QD F   S ++  AA   G +  EIV  E     G    ++D DE +      + +  LRP F    GTVTAG +
Sbjct:   13 PMGRSKGGIFRNVRAETLSAHLMSKLIERNPNLDPNEIEDIIWGCVQQTKEQGFNIARNAQLLTDIPRSVAAVTVNRLCGSSMQALHDATSGIMSGRGDVYMIGGVEHMGHVPM-------------DFNIDFHPGIAKTA---ARASGSMGMTAELLGRQNGISREMQDAFGARSHQKAHAAAVEGRWN-EIVATEGHDADG-ILKLIDADETIRPDSTTESMSGLRPVFDPVNGTVTAGTS 237          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14
Identity = 69/232 (29.74%), Postives = 103/232 (44.40%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G    + A  L +  + + L R   ++ S + ++++G V      G   AR A+L A IP+SV   TVN++C S ++A+  A++ I  G   V + GG+E M + P             + +   GM             MG  AE+ +  H I+RE QD FA  S  R  AA  +GAF  EI+P       G        +    +     L  LRP+F    GTVTAG +
Sbjct:   20 GAFRHVRAEDLSAHLMRSLLARNPALEASAIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCMVGGVEHMGHVPMSHGVDFHPGMSRNVAKAAGM-------------MGLTAEMLSRMHGISREMQDQFAARSHARAWAATQSGAFKNEILPTGGHDVDGVLKQYYYDEVIRPETTVEALSALRPAFDPVTGTVTAGTS 238          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ACIAD (3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14
Identity = 71/239 (29.71%), Postives = 101/239 (42.26%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L A +P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + I RE QD F V S  R  AA   G F  EIV VE     G         ++  D  L  F     + LRP F   GGTVTA  +
Sbjct:   25 GMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIVLLADLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGIGREEQDAFGVESHRRAWAATQEGRFKNEIVGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALRPVFDPKGGTVTAATS 242          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: VRAB_STAAC (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain COL) GN=vraB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 69/235 (29.36%), Postives = 111/235 (47.23%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNA 709
            G + GTL  L   +L     +   ++     S + +V  GNV+    G   AR+A L AG+ +S+   T+++ C SGL+++  A + IQ G   V +AGG+ES S AP    + ++   +   +L +   +       +D SM   AE  A+ + ++R  QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+
Sbjct:   15 GKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGN--GGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP---WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRGLQDEFAYRSHQLTAENVKNGNISQEILPITVK------GEIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANS 236          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_YERPY (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadI PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            A  LG I +   L R+ +   L+ ++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++SI  G  D+ +AGG +S S  P        + L +A K   L     +   L+          + +      MG  AE  A+ + I+RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N+
Sbjct:   37 AVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadI PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            A  LG I +   L R+ +   L+ ++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++SI  G  D+ +AGG +S S  P        + L +A K   L     +   L+          + +      MG  AE  A+ + I+RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N+
Sbjct:   37 AVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            A  LG I +   L R+ +   L+ ++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++SI  G  D+ +AGG +S S  P        + L +A K   L     +   L+          + +      MG  AE  A+ + I+RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N+
Sbjct:   37 AVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadI PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            A  LG I +   L R+ +   L+ ++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++SI  G  D+ +AGG +S S  P        + L +A K   L     +   L+          + +      MG  AE  A+ + I+RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N+
Sbjct:   37 AVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            A  LG I +   L R+ +   L+ ++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++SI  G  D+ +AGG +S S  P        + L +A K   L     +   L+          + +      MG  AE  A+ + I+RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N+
Sbjct:   37 AVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANS 272          
The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
FADI_PHOPR1.686e-1428.283-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]
FADA_PSEA61.686e-1431.283-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlan... [more]
FADA_ENT381.686e-1429.743-ketoacyl-CoA thiolase OS=Enterobacter sp. (strai... [more]
FADA_ACIAD1.686e-1429.713-ketoacyl-CoA thiolase OS=Acinetobacter sp. (stra... [more]
VRAB_STAAC2.202e-1429.36Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
FADI_YERPY2.202e-1425.943-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPS2.202e-1425.943-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPP2.202e-1425.943-ketoacyl-CoA thiolase OS=Yersinia pestis (strain... [more]
FADI_YERPN2.202e-1425.943-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_YERPE2.202e-1425.943-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI... [more]

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Properties
Property NameValue
Genbank descriptionC34102B03EF PostHarvP1 Citrus clementina cDNA clone C34102B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bp
ACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCAAGC
TTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGATCCA
TCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCTAGG
ACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATTCAG
TGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCTATA
ATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGTGGC
TGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAGCGA
GAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTTAAA
GATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGCTGA
ACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACTTTG
CTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCCTTT
GCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACCATC
AACCATTGTTGATAAGGATGAAGGTTTAGGCAAGTTTGACCCGGCAAAAT
TGAGGAAGCTTCGACCAAGTTTCAAGGAGAATGGAGGAACTGTTACGGCT
GGCAATGCC
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