FC931159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 64/242 (26.45%), Postives = 112/242 (46.28%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGK-FDPAKLRKLRPSFKENGGTVTAGNA 709 +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A S +G E++ V + +++D + + D + KLRP+F + G+VTA N+ Sbjct: 35 VSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMDVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYK----QFIERDNNIRENSDLSSYAKLRPAFDKKHGSVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHESH (3-ketoacyl-CoA thiolase OS=Shewanella sediminis (strain HAW-EB3) GN=fadI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 64/244 (26.23%), Postives = 110/244 (45.08%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 +SA +G + + L R+ +DP ++++ +G V+ AR+ LG G+ + +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L GL D+ SMG AE A+ ++I+R +QD A S +AG E++ V + + +D+D + + + KLRP+F GTVTA + Sbjct: 35 VSALDMGKMVVNEMLSRSELDPKQIEQLVYGQVVLMPAAPNIAREIVLGTGMDVATDAYSVTRACATSFQSTVNVAESIMTGNIEIGIAGGADSSSVVPIGVSKKLAHALIDLNKARSFGQKLAIIRRL--GLKDLLPVPPAVAEFSTGLSMGQTAEQMAKTYNISRADQDALAHRSHSLATETWNAGHLTDEVMAAHVPPYK----SFIDRDNNIRENSTIESYAKLRPAFDRKHGTVTAATS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 64/242 (26.45%), Postives = 112/242 (46.28%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGK-FDPAKLRKLRPSFKENGGTVTAGNA 709 +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A S +G E++ V + +++D + + D + KLRP+F + G+VTA N+ Sbjct: 35 VSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMDVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYK----QFIERDNNIRENSDLSSYAKLRPAFDKKHGSVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 65/242 (26.86%), Postives = 111/242 (45.87%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A S +G E++ V + +D+D + + + KLRP+F + GTVTA N+ Sbjct: 35 VSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYK----QFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 65/242 (26.86%), Postives = 111/242 (45.87%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A S +G E++ V + +D+D + + + KLRP+F + GTVTA N+ Sbjct: 35 VSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYK----QFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 65/242 (26.86%), Postives = 111/242 (45.87%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A S +G E++ V + +D+D + + + KLRP+F + GTVTA N+ Sbjct: 35 VSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYK----QFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 65/242 (26.86%), Postives = 111/242 (45.87%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709 +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A S +G E++ V + +D+D + + + KLRP+F + GTVTA N+ Sbjct: 35 VSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYK----QFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 63/242 (26.03%), Postives = 112/242 (46.28%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + ++ + + +D V+++ FG V+ AR+ LG +P +V++ CA+ ++ + ++++ G +AGG +S S P + L + K LG + L KD + + SMG AE A+ H+I+RE+QD+ V S ++ AA +AG + E+ ++A + +D + G KL KL+P F G+VTA N+ Sbjct: 35 IPAVDLGKMVVQELVNKTGIDGDWVEQLVFGQVVQMPEAPNIAREIVLGTSLPVGTDAYSVSRACATSFQSAVNIAEAMVAGHIRGGIAGGADSSSVLPIGVSKRMARALVDLNKAKTLGQRFSILKRLGFKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHNISREDQDELTVRSHQKAHAAWEAGWLSDEV----MTAYPEPYKKHLSRDNNIRGDSQIEKLAKLKPVFDRKHGSVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 69/243 (28.40%), Postives = 105/243 (43.21%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E + + P + + GM MG AE+ A H I+RE QD FA S R AA + AF EI+P G +P T V+ L LRP+F GTVTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHIGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALATLRPAFDPVNGTVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 69/243 (28.40%), Postives = 105/243 (43.21%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E + + P + + GM MG AE+ A H I+RE QD FA S R AA + AF EI+P G +P T V+ L LRP+F GTVTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHIGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALATLRPAFDPVNGTVTAGTS 238 The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bpback to top |