FC931159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECO7I (3-ketoacyl-CoA thiolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 60/241 (24.90%), Postives = 102/241 (42.32%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R+ + +++++ FG V+ AR+ LG G+ +V++ CA+ +AI ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAIANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 69/243 (28.40%), Postives = 104/243 (42.80%), Query Frame = 2 Query: 20 GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 G ++ A L + + + L R ++ + + ++++G V G AR AAL A +P+SV TVN++C S ++A+ A++ I G + GG+E M + P + + GM MG AE+ A H I+RE QD FA S R AA + AF EI+P G +P T V+ L LRP+F G VTAG + Sbjct: 20 GAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVE-----------ALATLRPAFDPVNGMVTAGTS 238
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R+ + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLCDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R+ + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_SHIB3 (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R+ + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 59/241 (24.48%), Postives = 101/241 (41.91%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARTEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECOSE (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain SE11) GN=fadI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R+ + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadI PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R+ + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 59/241 (24.48%), Postives = 101/241 (41.91%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARTEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 59/241 (24.48%), Postives = 101/241 (41.91%), Query Frame = 2 Query: 35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709 + A LG + + L R + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K + + L+ + + MG AE A+ + ITRE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N+ Sbjct: 35 IPAVDLGKMVVGELLARTEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272 The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bpback to top |