FC931159

Overview
NameFC931159
Unique NameFC931159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECODH (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12 / DH10B) GN=fadI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            + A  LG + +   L R+ +   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   +     +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N+
Sbjct:   35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECOBW (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12 / BW2952) GN=fadI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            + A  LG + +   L R+ +   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   +     +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N+
Sbjct:   35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECO8A (3-ketoacyl-CoA thiolase OS=Escherichia coli O8 (strain IAI1) GN=fadI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            + A  LG + +   L R+ +   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   +     +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N+
Sbjct:   35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECO81 (3-ketoacyl-CoA thiolase OS=Escherichia coli O81 (strain ED1a) GN=fadI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 59/241 (24.48%), Postives = 101/241 (41.91%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            + A  LG + +   L R  +   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   +     +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N+
Sbjct:   35 IPAVDLGKMVVGELLARTEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECO55 (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain 55989 / EAEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            + A  LG + +   L R+ +   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   +     +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N+
Sbjct:   35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECO45 (3-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 59/241 (24.48%), Postives = 101/241 (41.91%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            + A  LG + +   L R  +   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   +     +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N+
Sbjct:   35 IPAVDLGKMVVGELLARTEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 59/241 (24.48%), Postives = 102/241 (42.32%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            + A  LG + +   L R+ +   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   +     +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N+
Sbjct:   35 IPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13
Identity = 73/243 (30.04%), Postives = 116/243 (47.74%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA-----------RKGSRLGHDSLVDGM-LKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-STIVDKDEGLGKFDPAKLR---KLRPSFKENGGTVTAGNA 709
            A  LG + ++  + R  +DP L+++V FG V+        AR+  LG G+  +    +V + CA+  +A +  ++SI  G  D+ +AGG +S S  P    K LA +           +K   L + S  D M +   + +     SMG  AE  A+ ++I+R  QD  A  S    +AAQ   A+A   +  EV     +P    +D D  + + D +KL    KLRP+F    G+VTA N+
Sbjct:   36 AVDLGKMVVQEMMARTAIDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMSINTDAYSVTRACATSFQAAVNVAESIMAGSIDIGIAGGADSSSVLPIGVSKKLAASLLALSKTKTVGQKLKLLSNLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKSYAISRAEQDALAHRS--HTLAAQ---AWAEGKIRDEVMTAFPEPYKKWLDMDNNI-RMD-SKLESYAKLRPAFDRQYGSVTAANS 271          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_KLEP3 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (strain 342) GN=fadI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13
Identity = 61/240 (25.42%), Postives = 104/240 (43.33%), Query Frame = 2
Query:   41 ATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDP-AKLRKLRPSFKENGGTVTAGNA 709
            A  LG + +   L R+++   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +A K   L     +   L+          + +      MG  AE  A+   ITRE QD  A  S +    A + G  + E++       R      +++D  + K    A  +KLRP+F    GTVTA N+
Sbjct:   37 AVDLGKMVVGEMLARSDIPADVIEQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKTLARTLVDANKARTLSQKLKLFSRLRPRDLLPVPPAVAEYSTGLRMGDTAEQMAKSWGITREQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREP----LEQDNNIRKNSTLADYQKLRPAFDRKHGTVTAANS 272          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADI_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13
Identity = 62/242 (25.62%), Postives = 104/242 (42.98%), Query Frame = 2
Query:   35 LSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHD-SLVDGMLKDGLWDV-------YNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709
            + A +LG + +   L R+ + P +++++ FG V+        AR+  L + +       +V++ CA+  +A+   ++S+ +G     +AGG +S S  P        + L +A K   L     L  G+    L  V            MG  AE  A+ H ITRE QD  A+ S +R   A   G    E++   V           ++D  +  +       +LRP+F    GTVTA N+
Sbjct:   35 IPALELGRMVVSELLARSEISPDVIEQLVFGQVVQMPEAPNIAREIVLASALSVHTDAWSVSRACATSFQAVANVAESLMIGHIQAGIAGGADSSSVLPIGVSKKLARLLVDASKTRSLAQKLKLFSGLRPRDLLPVAPAVAEYSTGLRMGDSAEQMAKNHGITREQQDALALRSHQRAAHAWQQGLLNDEVMTACVPPWEQP----FEQDNNVRAESKMQDYARLRPAFDRRHGTVTAANS 272          
The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
FADI_ECODH3.179e-1324.483-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOBW3.179e-1324.483-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECO8A3.179e-1324.483-ketoacyl-CoA thiolase OS=Escherichia coli O8 (st... [more]
FADI_ECO813.179e-1324.483-ketoacyl-CoA thiolase OS=Escherichia coli O81 (s... [more]
FADI_ECO553.179e-1324.483-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECO453.179e-1324.483-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1... [more]
FADI_ECO243.179e-1324.483-ketoacyl-CoA thiolase OS=Escherichia coli O139:H... [more]
FADI_VIBCH4.152e-1330.043-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI... [more]
FADI_KLEP35.423e-1325.423-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (... [more]
FADI_ERWT95.423e-1325.623-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]

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Properties
Property NameValue
Genbank descriptionC34102B03EF PostHarvP1 Citrus clementina cDNA clone C34102B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bp
ACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCAAGC
TTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGATCCA
TCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCTAGG
ACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATTCAG
TGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCTATA
ATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGTGGC
TGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAGCGA
GAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTTAAA
GATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGCTGA
ACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACTTTG
CTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCCTTT
GCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACCATC
AACCATTGTTGATAAGGATGAAGGTTTAGGCAAGTTTGACCCGGCAAAAT
TGAGGAAGCTTCGACCAAGTTTCAAGGAGAATGGAGGAACTGTTACGGCT
GGCAATGCC
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