FC931159

Overview
NameFC931159
Unique NameFC931159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15352 contig Ccv1_Contig15352:174..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.150e-45
Identity = 115/237 (48.52%), Postives = 150/237 (63.29%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYL-AEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            +G F G+L+S SA  LG+  I+AA++RA +D   V EV  GNVL A LGQ PARQA L +G+  +V   TVNKVC SGLK++ LA+Q+IQ G    IVAGGME+MS AP  L A+AR G RLG   + D +L+DGL    +   MG  AE  A+++ ITRE QD+ A+ S  +  AA ++GAF  EIVPV V     K + +  +DE       A+ L  LRP+F +  GTVTAGNA
Sbjct:   14 IGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVT--RKKTFVFSQDEFPKANSTAEALGALRPAF-DKAGTVTAGNA 247          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 4.114e-45
Identity = 111/236 (47.03%), Postives = 145/236 (61.44%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENG-GTVTAGNA 709
            +G F G L+++    LGS  I+  LKRA V P  V EV FG+VL+A  GQ P RQA++GAGIP SV   +   +C SGLKA+ LA QSI +G + ++VAGGME+MS AP +LA  R G ++G   L D +L DGL D +++C MG  AE  A++  ++RE+QD  AVLS  R   AQ AG F  EIVPV VS  +G      D+    G    A + KL+P F  +G GTVT  NA
Sbjct:   18 IGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAP-HLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEA-MSKLKPYFLTDGTGTVTPANA 251          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIC_RAT (Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.197e-44
Identity = 107/236 (45.34%), Postives = 146/236 (61.86%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENG-GTVTAGNA 709
            +G F G LS++    LG+  I+  L+RA V P  V EV FG+VL+A  GQ P RQA++GAGIP SV   +   +C SGLKA+ LA+QSI +G + ++VAGGME+MS AP +LA  R G ++G   L D +L DGL D +++  MG  AE  A++  ++RE QD  AV+S  R   AQ AG F  EIVPV VS+ +G     +D+    G  +   + KL+P F  +G GTVT  NA
Sbjct:   18 IGSFNGALSTVPVHNLGTTVIKEVLQRAKVAPEEVSEVIFGHVLTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMSKAP-HLAHLRSGVKMGEVPLADSILCDGLTDAFHNYHMGITAENVAKKWQVSREAQDKVAVVSQNRAEHAQKAGHFDKEIVPVHVSSRKGLTEVKIDEFPRHGS-NLEAMSKLKPYFLTDGTGTVTPANA 251          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_MYCTU (Probable acetyl-CoA acetyltransferase OS=Mycobacterium tuberculosis GN=fadA4 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.563e-44
Identity = 104/237 (43.88%), Postives = 143/237 (60.34%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P+G  +G+L   SA++LG+IAI+ AL++ANV  SLV+ V  G VL+A  GQ PARQAA+ AGI   V   T+NK+C SG+ AI LA Q I+    DV+VAGG ESM+ AP  L  +R G + G  +++D M  DGL DV+ D  MG   E   +    TR  QD++A  S ++  AA   G FA E++PV +    G P    + DEG+      A L  L+P+F+   GT+TAG+A
Sbjct:    9 PIGKLMGSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQMPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMTKAPHLLMNSRSGYKYGDVTVLDHMAYDGLHDVFTDQPMGALTEQRNDVDMFTRSEQDEYAAASHQKAAAAWKDGVFADEVIPVNIPQRTGDPLQFTE-DEGIRANTTAAALAGLKPAFR-GDGTITAGSA 243          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_MYCBO (Probable acetyl-CoA acetyltransferase OS=Mycobacterium bovis GN=fadA4 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.563e-44
Identity = 104/237 (43.88%), Postives = 143/237 (60.34%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P+G  +G+L   SA++LG+IAI+ AL++ANV  SLV+ V  G VL+A  GQ PARQAA+ AGI   V   T+NK+C SG+ AI LA Q I+    DV+VAGG ESM+ AP  L  +R G + G  +++D M  DGL DV+ D  MG   E   +    TR  QD++A  S ++  AA   G FA E++PV +    G P    + DEG+      A L  L+P+F+   GT+TAG+A
Sbjct:    9 PIGKLMGSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQMPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMTKAPHLLMNSRSGYKYGDVTVLDHMAYDGLHDVFTDQPMGALTEQRNDVDMFTRSEQDEYAAASHQKAAAAWKDGVFADEVIPVNIPQRTGDPLQFTE-DEGIRANTTAAALAGLKPAFR-GDGTITAGSA 243          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.482e-44
Identity = 107/236 (45.34%), Postives = 146/236 (61.86%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENG-GTVTAGNA 709
            +G F G LS++   ++G+  I+  L+RA V P  V EV FG+VL+A  GQ P RQA++GAGIP SV   +   +C SGLKA+ LA+QSI +G + ++VAGGME+MS AP +L   R G R+G   L D +L DGL D +++  MG  AE  A++  ++RE QD  AVLS  R   AQ AG F  EIVPV VS+ +G     +D+    G  +   + KL+P F  +G GTVT  NA
Sbjct:   18 IGSFNGALSTVPVHEMGTTVIKEVLQRAKVAPEEVSEVIFGHVLTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMSKAP-HLTHLRTGVRMGEVPLADSILCDGLTDAFHNYHMGITAENVAKKWQVSREAQDKVAVLSQNRAEHAQKAGHFDKEIVPVLVSSRKGLTEVKIDEFPRHGS-NLEAMGKLKPYFLTDGTGTVTPANA 251          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_RHIME (Acetyl-CoA acetyltransferase OS=Rhizobium meliloti GN=phbA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 109/238 (45.80%), Postives = 142/238 (59.66%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL---GKFDPAKLRKLRPSFKENGGTVTAGNA 709
            +G F G   +  A +LG+ AI+A L+RA V+   V EV  G VL A  GQ PARQAA+ AG+P       +N++C SGL+A+ L  Q I  G   VIVAGGMESMS AP + A  R G ++G   ++D M+KDGL D +    MG  AE  A +  +TRE QD+FA+ S  +  AAQ AG FA EIVP  V   +G  +  VD+DE +      D   + KLRP+F +  GTVTAGNA
Sbjct:   16 VGSFNGAFGNTLAHELGAAAIKAVLERAGVEAGEVDEVILGQVLPAGEGQNPARQAAMKAGLPQEKTAWGMNQLCGSGLRAVALGMQQIATGDAKVIVAGGMESMSMAP-HCAHLRGGVKMGDYKMIDTMIKDGLTDAFYGYHMGITAENVARKWQLTREEQDEFALASQNKAEAAQKAGRFADEIVPFVVKTRKGDVN--VDQDEYIRHGATLD--SIAKLRPAF-DKEGTVTAGNA 247          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THL_BACSU (Acetyl-CoA acetyltransferase OS=Bacillus subtilis GN=mmgA PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40
Identity = 100/237 (42.19%), Postives = 141/237 (59.49%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNA 709
            P G F G L  + A +LG I ++ AL++A V    V+    G V+ A  GQ P+RQAA  AG+P SV   T+NKVCASGL+A+ L  Q I+    D++VAGGMESMSN P  +   R G+R+G   L D M+ DGL   +++  M       A++++I+R  QD++A+ S  R   A D G F  EIVPV     +GKP+ +VDKDE + +     +L KL P +  + G++TAGNA
Sbjct:   13 PFGKFGGVLKEVKAAELGGIVMKEALQQAGVSGDDVEGNVMGMVVQAGSGQIPSRQAARLAGMPWSVPSETLNKVCASGLRAVTLCDQMIRAQDADILVAGGMESMSNIPYAVPAGRWGARMGDGELRDLMVYDGLTCAFDEVHMAVHGNTAAKEYAISRREQDEWALRSHARAAKAADEGKFQDEIVPVNWIGRKGKPN-VVDKDEAIRRDTSLDQLAKLAPIYASD-GSITAGNA 247          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_ZOORA (Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4)

HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40
Identity = 105/238 (44.12%), Postives = 136/238 (57.14%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL---GKFDPAKLRKLRPSFKENGGTVTAGNA 709
            +G F G  ++  A +LG+  I A L+RA V    V EV  G VL A  GQ PARQAA+ AG+P       +N++C SGL+A+ L  Q I  G   +IVAGGMESMS AP + A    G ++G   ++D M+KDGL D +    MGT AE  A+Q  ++R+ QD FAV S  +  AAQ  G F  EIVP  V   +G     VD DE +      D   + KLRP+F +  GTVTAGNA
Sbjct:   15 VGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAP-HCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG--DITVDADEYIRHGATLD--SMAKLRPAF-DKEGTVTAGNA 246          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIM_HUMAN (3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.373e-32
Identity = 90/237 (37.97%), Postives = 126/237 (53.16%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P G + G L   +AT L   A +AAL    V P  V  V  GNVL ++      AR   L  GIP      T+N++C SG ++I+   Q I +   +V++ GG ESMS AP  +   R G++LG D  ++  L   L D +    M   AE  A +H I+RE  D +A+ S +R  AA DAG F  E+ P+EV   +GK +  VD +    +    +L+KL P FK++ GTVTAGNA
Sbjct:   16 PFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRNVRFGTKLGSDIKLEDSLWVSLTDQHVQLPMAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVD-EHARPQTTLEQLQKLPPVFKKD-GTVTAGNA 250          
The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ATOB_ECOLI3.150e-4548.52Acetyl-CoA acetyltransferase OS=Escherichia coli (... [more]
THIC_HUMAN4.114e-4547.03Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
THIC_RAT1.197e-4445.34Acetyl-CoA acetyltransferase, cytosolic OS=Rattus ... [more]
THIL_MYCTU1.563e-4443.88Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
THIL_MYCBO1.563e-4443.88Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
THIC_MOUSE3.482e-4445.34Acetyl-CoA acetyltransferase, cytosolic OS=Mus mus... [more]
THIL_RHIME8.578e-4345.80Acetyl-CoA acetyltransferase OS=Rhizobium meliloti... [more]
THL_BACSU2.336e-4042.19Acetyl-CoA acetyltransferase OS=Bacillus subtilis ... [more]
THIL_ZOORA2.336e-4044.12Acetyl-CoA acetyltransferase OS=Zoogloea ramigera ... [more]
THIM_HUMAN1.373e-3237.973-ketoacyl-CoA thiolase, mitochondrial OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC34102B03EF PostHarvP1 Citrus clementina cDNA clone C34102B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bp
ACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCAAGC
TTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGATCCA
TCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCTAGG
ACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATTCAG
TGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCTATA
ATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGTGGC
TGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAGCGA
GAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTTAAA
GATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGCTGA
ACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACTTTG
CTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCCTTT
GCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACCATC
AACCATTGTTGATAAGGATGAAGGTTTAGGCAAGTTTGACCCGGCAAAAT
TGAGGAAGCTTCGACCAAGTTTCAAGGAGAATGGAGGAACTGTTACGGCT
GGCAATGCC
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