FC931159

Overview
NameFC931159
Unique NameFC931159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15352 contig Ccv1_Contig15352:174..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.729e-25
Identity = 85/242 (35.12%), Postives = 129/242 (53.31%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAI-EAALKRANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKG-SRLGH--DSLVDGMLKDGLW-DVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P+G + G LS + A  L +I + E  ++   +D   + +V  G    A    +  AR A L AG+P SV  TT+N++C SGL A+  A+++I+ G  D+++AGG+ESMS AP  + +A    SR     D+ +     + L    +   SM   AE  AE   I+RE+QD FA+ S +R   AQ +G  A EIVPV +   +G  + I   +    +    +LR L+  F+ N G +TAGNA
Sbjct:   13 PIGRYGGALSGVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKATSAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRAN-GVITAGNA 253          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25
Identity = 86/238 (36.13%), Postives = 124/238 (52.10%), Query Frame = 2
Query:   11 GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPST----IVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            GF G+  ++ +  + +  ++  +K+ N+DPSL+++V  GNVL+   G    R A L AGIP +     VN+ C+SGL AI   +  I+ G  +  +AGG ESMS   +   + R   R+      D  ++  L        MG   E  A Q +I+RE QD+FA  S+ +   A  +GAF  EI+P+  S  R    T    IVD DEG  +   A+ L KLRP+F    GT TAGNA
Sbjct:   40 GFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYR---DPRVAPRIDPHLADDAQMEKCL------IPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVASGAFKSEILPIR-SIIRNSDGTEKEIIVDTDEGPREGVTAESLGKLRPAF---DGTTTAGNA 264          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25
Identity = 88/245 (35.92%), Postives = 137/245 (55.92%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEA----RKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENG--GTVTAGNA 709
            P+G F G+LS++ A  L ++ ++A ++R   VD S + EVF G    A    +  AR A L AG+P SV   T+N++CASG+ AI  A ++I  G  ++ +AGG+ESMS AP  + +A     +G ++   ++    +   + + Y    M   A+  A+ + ++R +QD FA+ S +R   AQ+AG FA EIVPV +   +G   T+V+ DE        + L +L+P    NG   TVTAGNA
Sbjct:   14 PIGRFGGSLSAVRADDLAAVPLKALVERNPGVDWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAFRAIACGEMELAIAGGVESMSRAPYVMGKADSAFGRGQKIEDTTIGWRFVNPLMKEQYGIDPMPQTADNVADDYRVSRADQDAFALRSQQRAGRAQEAGFFAEEIVPVTIRGRKG--DTLVEHDEHPRPDTTLEALARLKP---VNGPEKTVTAGNA 253          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24
Identity = 80/239 (33.47%), Postives = 124/239 (51.88%), Query Frame = 2
Query:   11 GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA---GRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNA 709
            G  G     S+++L +  +E  +K + +DP L+ +V  GNVL+A  G    R A L AGIP +V    +N+ C+SGL A+   +  I+ G  D+ +  G+ESMSN            + G +S+     K    +    C   MG  +E  A +++++R+ QD FA  S+E+  AAQ AG F  EI+P++ +       +    V+KD+G+     A KL KL+P+F    GT  AGNA
Sbjct:   43 GGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAGAGATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMSN------------QYGPNSVTPFSNKFQNNEEAKKCLIPMGITSENVAAKYNVSRKAQDAFAAKSYEKAAAAQAAGKFDQEILPIKTTVLDDDDNEKEVTVNKDDGIRPGVTAEKLGKLKPAFSAE-GTTHAGNA 268          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.228e-24
Identity = 69/232 (29.74%), Postives = 121/232 (52.16%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN--APKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            G L SL   +L + AI   +++  +DP L++EV  G+ LS+  G   AR   L AG+P       +N++C SGL+++ L ++ I+ G  ++ +AGG ESM++   PK    +R G+    +   D ML           ++G  +E+  + H +TR   D++AV S +R + A   G F  EI+P+ V          V++DEG+ +     +  L+P F+++G   +A ++
Sbjct:   23 GKLRSLRNDELVTAAIRGIIEKTGIDPRLIEEVILGHCLSSMEGNVAARMGVLRAGVPVETPVMIINRLCGSGLESVGLIAEKIRSGRIEIGLAGGFESMTSYGLPKEYTLSRGGA---CEDAEDCML-----------TLGEVSEMLGKTHGVTRSEADEYAVTSQKRALEATKKGHFLAEIIPMRVG------DETVERDEGIRETSLGTIESLKPVFRQDGVCTSANSS 234          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 84/240 (35.00%), Postives = 127/240 (52.92%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            GGF  T    +  +L S  + A L+   + P  + ++  GNVL    G   AR A   +GIP +V  +TVN+ C+SGL+A+   +  I+ G  D+ +A G+ESMS            S +G+   +   L +   +   DC   MG  +E  AE+  I+R+ QDDFA+ S ++  +AQ  G F  EIVPV  +    +G   TI V +DEG+      + L KL+P+FK+ GG+ TAGN+
Sbjct:   54 GGFKNT----TPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSL-----------SGMGNPGNISSRLLES--EKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVTTTVLDDKGDKKTITVSQDEGVRPSTTMQGLAKLKPAFKD-GGSTTAGNS 275          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 85/239 (35.56%), Postives = 123/239 (51.46%), Query Frame = 2
Query:   20 GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVL-SANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGR----GKP---STIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            G+L+++    LG+I ++  LKRA      + ++  G     A  G   AR     AG+P +V   TVN+ C+SGL++I  A++ I LG  D  +AGG ESMS  P           +GH +  +  L +   + Y   SMG  AE  A+++ ++RE+QD FAV S +    A   G F  EIVPVEV+        KP     +  +DEG+     A  L  LRP+F  + GTVTAGN+
Sbjct:   20 GSLATVRPDDLGAICVKETLKRAGGYEGNIDDLIIGCATPEAEQGLNMARNIGALAGLPYTVPAITVNRYCSSGLQSIAYAAEKIMLGAYDTAIAGGAESMSQVP----------MMGHVTRPNLALAEKAPEYY--MSMGHTAEQVAKKYGVSREDQDAFAVRSHQNAAKALAEGKFKDEIVPVEVTVTEIGEDHKPMEKQFVFSQDEGVRPQTTADILSTLRPAFSVD-GTVTAGNS 245          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.288e-22
Identity = 86/240 (35.83%), Postives = 125/240 (52.08%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPV--EVSAGRG-KPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            GGF  T    +  +L S  + A LK  N+ P  + ++  GNVL    G   AR A   + IP +V  +TVN+ C+SGL+A+   +  I+ G  D+ +A G+ESMS A +           G+   +   L +   +   DC   MG  +E  AE+  I+RE QD FA+ S ++   AQ  G F  EIVPV   V   +G K S  V +DEG+      + L KL+P+FK++G T TAGN+
Sbjct:   54 GGFKDT----TPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADR-----------GNPGNITSRLMEK--EKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGST-TAGNS 275          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22
Identity = 82/238 (34.45%), Postives = 125/238 (52.52%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            GGF  T    +  +L S  + A L+   + P  + ++  GNVL    G A AR A   +GIP +V  + VN+ C+SGL+A+   +  I+ G  D+ +A G+ESM+     L+E      +    L +   +D L        MG  +E  AE+  I+R+ QD FA+ S ++  +AQ  G F  EIVPV  +    +G   TI V +DEG+      + L KL+P+FK+ GG+ TAGN+
Sbjct:   54 GGFKDT----TPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT-----LSERGNPGNISSRLLENEKARDCL------IPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGDRKTITVSQDEGVRPSTTMEGLAKLKPAFKD-GGSTTAGNS 275          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22
Identity = 83/240 (34.58%), Postives = 124/240 (51.67%), Query Frame = 2
Query:    8 GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            GGF  T    +  +L S  + A L+   + P  + ++  GNVL    G   AR A   +GIP +V  + VN+ C+SGL+A+   +  I+ G  D+ +A G+ESMS            S  G+   +   L +   D   DC   MG  +E  AE+  I+R+ QD FA+ S ++  +AQ  G F  EIVPV  +    +G   TI V +DEG+      + L KL+P+FK+ GG+ TAGN+
Sbjct:   54 GGFKDT----TPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSL-----------SNRGNPGNISSRLLES--DKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGDRKTITVSQDEGVRPSTTMEGLAKLKPAFKD-GGSTTAGNS 275          
The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
PAAJ_ECOLX4.729e-2535.12Beta-ketoadipyl-CoA thiolase OS=Escherichia coli G... [more]
THIKB_CANTR6.176e-2536.133-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]
PCAF_PSEAE8.066e-2535.92Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aerugi... [more]
THIK_YARLI4.003e-2433.473-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
THIK_ENCCU5.228e-2429.743-ketoacyl-CoA thiolase, peroxisomal OS=Encephalit... [more]
THIKA_MOUSE6.828e-2435.003-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
FADA_BACSU6.828e-2435.563-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fa... [more]
THIK_HUMAN1.288e-2235.833-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIKB_RAT1.682e-2234.453-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
THIKA_RAT1.682e-2234.583-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionC34102B03EF PostHarvP1 Citrus clementina cDNA clone C34102B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bp
ACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCAAGC
TTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGATCCA
TCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCTAGG
ACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATTCAG
TGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCTATA
ATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGTGGC
TGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAGCGA
GAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTTAAA
GATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGCTGA
ACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACTTTG
CTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCCTTT
GCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACCATC
AACCATTGTTGATAAGGATGAAGGTTTAGGCAAGTTTGACCCGGCAAAAT
TGAGGAAGCTTCGACCAAGTTTCAAGGAGAATGGAGGAACTGTTACGGCT
GGCAATGCC
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