FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SILPO (Chaperone protein dnaK OS=Silicibacter pomeroyi GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.422e-32
Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV +      ++I N +G R TPS VAFTD ERL+G+ AK QA  NP  TIF VKRLIGR+ +D EV +D K+ P+ IVN  +G  +++ +   GE   +SP +ISA+IL KMKETAE++LG+++
Sbjct:    1 MGKVIGIDLGTTNSCVAIMDGAQPKVIENSEGARTTPSIVAFTDEERLVGQPAKRQAVTNPSNTIFGVKRLIGRRVDDAEVTKDKKMVPFTIVNGGNGDAWVEAK---GEK--YSPSQISAVILGKMKETAESYLGEEV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP2 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain HaA2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.422e-32
Identity = 75/140 (53.57%), Postives = 100/140 (71.43%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV V    + ++I N +G R TPS VAF+D  ERL+G+ AK QA  NP+RT F VKRL+GR+++D  V++D KL PYKIV   +G  +++    DG+T  +SP ++SA IL KMKETAEA LG+K+
Sbjct:    1 MGKVIGIDLGTTNSCVAVMDGKNSKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLVGRRYDDPMVEKDKKLVPYKIVKASNGDAWVEA---DGQT--YSPSQVSAFILQKMKETAEAHLGQKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.858e-32
Identity = 77/147 (52.38%), Postives = 99/147 (67.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIRMLLSLV 723
            +  VIGIDLGTT SCV V    + ++I N +G R TPS VAFTD  ERL+G+ AK QA  NP+ TIF VKRLIGR+F+D  V++D  L PYKIV  D G  ++     +   K +SP +ISAMIL KMKETAE++LG+K+   +  V
Sbjct:    1 MAKVIGIDLGTTNSCVAVMDGKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWV-----EEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITV 142          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BARHE (Chaperone protein dnaK OS=Bartonella henselae GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.858e-32
Identity = 77/147 (52.38%), Postives = 99/147 (67.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIRMLLSLV 723
            +  VIGIDLGTT SCV V    + ++I N +G R TPS VAFTD  ERL+G+ AK QA  NP+ TIF VKRLIGR+F+D  V++D  L PYKIV  D G  ++     +   K +SP +ISAMIL KMKETAE++LG+K+   +  V
Sbjct:    1 MAKVIGIDLGTTNSCVAVMDGKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWV-----EEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITV 142          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_PELPB (Chaperone protein dnaK OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.426e-32
Identity = 72/139 (51.80%), Postives = 100/139 (71.94%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V +     +I N +GNR TPS +A T + +RL+G+AAK QA  NP  TIF +KR +GRK++  E+  + KLAPY+I+N  G+   +V+I D   K++SP+E+SAMIL KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVSVMQGSQPTVIENSEGNRTTPSIIALTKTGDRLVGQAAKRQAITNPKNTIFSIKRFMGRKYD--EINDEKKLAPYEIINEGGE--ARVKIND---KIYSPQEVSAMILQKMKQTAEDFLGEKV 132          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_GEOMG (Chaperone protein dnaK OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.426e-32
Identity = 70/140 (50.00%), Postives = 101/140 (72.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  VIGIDLGTT SCV + + G   +IAN +G+R TPS VAF +S ERL+G+ AK QA  NP+ T+F +KRLIGRKF+  EV++D+ ++P+KIV  D G  ++ V+      K++SP E+SA++L KMK+TAE +LG+ +
Sbjct:    1 MSKVIGIDLGTTNSCVAIMEGGEPVVIANSEGSRTTPSMVAFAESGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFDTDEVRKDISISPFKIVKADNGDAWVDVR-----GKMYSPPEVSAIVLQKMKKTAEDYLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTE (Chaperone protein dnaK OS=Chlorobium tepidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.426e-32
Identity = 76/139 (54.68%), Postives = 98/139 (70.50%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V +     +I N +G+R TPS VAFT + ERL+G+AAK QA  NP  TIF +KR +GRK++  EV  + KLA Y +VN  G  Y +V+I D   K +SP+EISAMIL KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAVMQGTQPTVIENSEGSRTTPSMVAFTKTGERLVGQAAKRQAVTNPKNTIFSIKRFMGRKYD--EVPNEKKLASYDVVNEGG--YAKVKIGD---KTYSPQEISAMILQKMKQTAEDFLGEKV 132          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCH (Chaperone protein dnaK OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.426e-32
Identity = 73/139 (52.52%), Postives = 100/139 (71.94%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V +     +I N +GNR TPS V FT + +RL+G+AAK QA  NP  TIF +KR +GR+F+  EV  + K+APY+++N  G+   +V+I D   KV+SP+EISAM+L KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAVMQGSQPTVIENSEGNRTTPSVVGFTKTGDRLVGQAAKRQAITNPKNTIFSIKRFMGRRFD--EVGEEKKMAPYELINDSGE--ARVKIND---KVYSPQEISAMVLQKMKQTAEDFLGEKV 132          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BART1 (Chaperone protein dnaK OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dnaK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.426e-32
Identity = 76/147 (51.70%), Postives = 99/147 (67.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIRMLLSLV 723
            +  VIGIDLGTT SCV V    + ++I N +G R TPS VAFTD  ERL+G+ AK QA  NP+ T+F VKRLIGR+F+D  V++D  L PYKIV  D G  ++     +   K +SP +ISAMIL KMKETAE++LG+K+   +  V
Sbjct:    1 MAKVIGIDLGTTNSCVAVMDGKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTVFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWV-----EEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITV 142          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SOLUE (Chaperone protein dnaK OS=Solibacter usitatus (strain Ellin6076) GN=dnaK PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32
Identity = 72/140 (51.43%), Postives = 98/140 (70.00%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V + G   +IAN +GNR TPS VAFT S ERL+G+ AK QA  NP+ T+F +KR +GR+++  EV  +MK+ PYK+V   +G   + +       K +SP EISAMILTK+KE AE++LG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAVMEGGQPTVIANQEGNRTTPSVVAFTKSGERLVGQVAKRQAITNPENTVFSIKRFMGRRYD--EVNEEMKMVPYKVVRGENGDARVDIM-----GKKYSPPEISAMILTKLKEAAESYLGEKV 133          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SILPO1.422e-3252.52Chaperone protein dnaK OS=Silicibacter pomeroyi GN... [more]
DNAK_RHOP21.422e-3253.57Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_BARQU1.858e-3252.38Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
DNAK_BARHE1.858e-3252.38Chaperone protein dnaK OS=Bartonella henselae GN=d... [more]
DNAK_PELPB2.426e-3251.80Chaperone protein dnaK OS=Pelodictyon phaeoclathra... [more]
DNAK_GEOMG2.426e-3250.00Chaperone protein dnaK OS=Geobacter metallireducen... [more]
DNAK_CHLTE2.426e-3254.68Chaperone protein dnaK OS=Chlorobium tepidum GN=dn... [more]
DNAK_CHLCH2.426e-3252.52Chaperone protein dnaK OS=Chlorobium chlorochromat... [more]
DNAK_BART12.426e-3251.70Chaperone protein dnaK OS=Bartonella tribocorum (s... [more]
DNAK_SOLUE3.169e-3251.43Chaperone protein dnaK OS=Solibacter usitatus (str... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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