FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_PROA2 (Chaperone protein dnaK OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32
Identity = 73/139 (52.52%), Postives = 97/139 (69.78%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V +     +I N +G R TPS VAFT + ERLIG AAK QA  N   T+F +KR +GRKF+  EV  + K+APYK+VN +G+  +++     + K +SP+EISAMIL KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAVMQGTQPTVIENSEGYRTTPSMVAFTKNGERLIGHAAKRQAITNAKNTVFSIKRFMGRKFD--EVPNEKKIAPYKVVNINGEARVEI-----DDKNYSPQEISAMILQKMKQTAEDFLGEKV 132          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCA (Chaperone protein dnaK OS=Rhodobacter capsulatus GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.220e-32
Identity = 72/139 (51.80%), Postives = 97/139 (69.78%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  VIGIDLGTT SCV +       +I N +G R TPS VA+TD+ERL+G+ AK QA  NP  T+F VKRLIGR+  D EV++D KL PY IV+  +G  +++V+   GE   FSP ++SA+IL KMKETAE++LG+ +
Sbjct:    1 MAKVIGIDLGTTNSCVAIMDGSQPRVIENSEGARTTPSIVAYTDNERLVGQPAKRQAVTNPTNTVFAVKRLIGRRTTDAEVEKDKKLVPYNIVDGGNGDAWVEVR---GEK--FSPAQVSAVILQKMKETAESYLGETV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HAHCH (Chaperone protein dnaK OS=Hahella chejuensis (strain KCTC 2396) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.220e-32
Identity = 69/139 (49.64%), Postives = 94/139 (67.63%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + +     +I N +G R TPS VA+TD E L+G++AK QA  NP  T+F +KRLIGR+FED  VQ+D+K+ PY I   D G  ++ V     + K  +P +ISA +L KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAILEGDKPRVIENSEGGRTTPSIVAYTDDETLVGQSAKRQAVTNPTNTLFAIKRLIGRRFEDDVVQKDIKMVPYTIAKADNGDAWVDV-----KGKKMAPPQISAEVLKKMKKTAEDFLGEKV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSF (Chaperone protein dnaK OS=Geobacter sp. (strain FRC-32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.220e-32
Identity = 72/139 (51.80%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  VIGIDLGTT SCV + + G   +IAN +G+R TPS VA TDS ERL+G+ AK QA  NP+ T+F +KRLIGRKFE + V++D+ ++P+KIV  D      V++R    + +SP EISAM+L KMK+TAE +LG+ +
Sbjct:    1 MSKVIGIDLGTTNSCVAIMEGGEPIVIANAEGSRTTPSMVAITDSGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFESEAVKKDIAISPFKIVKADNAD-AWVEVRG---QKYSPPEISAMVLQKMKKTAEDYLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFT (Chaperone protein dnaK OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SC+ + + G   +I N +G+R TPS VA+T D E L+G AAK QA  NP  T + VKRLIGRKF D EVQ+D+ L PYKI   D        +   + K  +P+EISA +L KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNG---DAWVATADGKKLAPQEISAKVLEKMKKTAEDFLGEKV 136          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFM (Chaperone protein dnaK OS=Xylella fastidiosa (strain M12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SC+ + + G   +I N +G+R TPS VA+T D E L+G AAK QA  NP  T + VKRLIGRKF D EVQ+D+ L PYKI   D        +   + K  +P+EISA +L KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNG---DAWVATADGKKLAPQEISAKVLEKMKKTAEDFLGEKV 136          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_XYLF2 (Chaperone protein dnaK OS=Xylella fastidiosa (strain M23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SC+ + + G   +I N +G+R TPS VA+T D E L+G AAK QA  NP  T + VKRLIGRKF D EVQ+D+ L PYKI   D        +   + K  +P+EISA +L KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNG---DAWVATADGKKLAPQEISAKVLEKMKKTAEDFLGEKV 136          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_NITHX (Chaperone protein dnaK OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 76/140 (54.29%), Postives = 98/140 (70.00%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV V      ++I N +G R TPS VAF+D  ERL+G+ AK QA  NP+RTIF VKRLIGR+++D  V++D  L PYKI    +G  +++V   DG+T  +SP +ISA  L KMKETAEA LG+K+
Sbjct:    1 MGKVIGIDLGTTNSCVAVMDGKTPKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTIFAVKRLIGRRYDDPTVEKDKHLVPYKIAKAGNGDAWVEV---DGKT--YSPSQISAFTLQKMKETAEAHLGQKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSL (Chaperone protein dnaK OS=Geobacter sulfurreducens GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 70/140 (50.00%), Postives = 101/140 (72.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  VIGIDLGTT SCV V + G   +IAN +G+R TPS VAF +S ERL+G+ AK QA  NP+ T+F +KRLIGRK++ +EV++D+ ++P+KIV  D G  +++ +      K++S  EISAM+L KMK+TAE +LG+ +
Sbjct:    1 MSKVIGIDLGTTNSCVAVMEGGEPVVIANAEGSRTTPSMVAFAESGERLVGQQAKRQAVTNPENTLFAIKRLIGRKYDTEEVRKDISISPFKIVKADNGDAWVEAR-----GKMYSAPEISAMVLQKMKQTAEDYLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPB (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain BS1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 74/139 (53.24%), Postives = 98/139 (70.50%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V +     +I N +G R TPS VAFT + ERL+G AAK QA  N + TIF +KR +GRKF+  E+  + K+APYK+ N +G+   +V+I D   K +SP+EISAMIL KMK+TAE FLG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAVMQGTKPTVIENSEGYRTTPSMVAFTKNGERLVGHAAKRQAITNAENTIFSIKRFMGRKFD--EISNEKKIAPYKVTNVNGE--ARVEIGD---KTYSPQEISAMILQKMKQTAEDFLGEKV 132          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PROA27.059e-3252.52Chaperone protein dnaK OS=Prosthecochloris aestuar... [more]
DNAK_RHOCA9.220e-3251.80Chaperone protein dnaK OS=Rhodobacter capsulatus G... [more]
DNAK_HAHCH9.220e-3249.64Chaperone protein dnaK OS=Hahella chejuensis (stra... [more]
DNAK_GEOSF9.220e-3251.80Chaperone protein dnaK OS=Geobacter sp. (strain FR... [more]
DNAK_XYLFT1.204e-3151.08Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLFM1.204e-3151.08Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLF21.204e-3151.08Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_NITHX1.204e-3154.29Chaperone protein dnaK OS=Nitrobacter hamburgensis... [more]
DNAK_GEOSL1.204e-3150.00Chaperone protein dnaK OS=Geobacter sulfurreducens... [more]
DNAK_CHLPB1.204e-3153.24Chaperone protein dnaK OS=Chlorobium phaeobacteroi... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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