FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CELJU (Chaperone protein dnaK OS=Cellvibrio japonicus (strain Ueda107) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 73/140 (52.14%), Postives = 101/140 (72.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + + G  ++I N +G+R TPS +AFT D E L+G++AK QA  NP  T+F VKRLIGRKF+D  VQ+D+ + PYKIV  D G  +++V+   GE K  +P +ISA +L KMK+TAE +LG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVSILEGGAPKVIENAEGDRTTPSIIAFTNDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRKFKDDVVQKDISMVPYKIVAADNGDAWVEVK---GEKK--APPQISAEVLKKMKKTAEDYLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 73/140 (52.14%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  +IGIDLGTT SCV V +    ++I N +G R TPS VAFT D ERL+G+ AK Q+  NP+RT F VKRLIGR+++D  V++D  L PY IV  D G  +++    DG  K +SP +ISA +L KMKETAE+FLG+K+
Sbjct:    1 MAKIIGIDLGTTNSCVAVMEGSTPKVIENAEGARTTPSIVAFTEDGERLVGQPAKRQSVTNPERTFFAVKRLIGRRYDDPTVEKDKHLVPYSIVRADNGDAWVEA---DG--KKYSPSQISAFVLQKMKETAESFLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SILST (Chaperone protein dnaK OS=Silicibacter sp. (strain TM1040) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 68/139 (48.92%), Postives = 96/139 (69.06%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  VIGIDLGTT SCV +       +I N +G R TPS VAFTD ERL+G+ AK QA  NPD TIF VKRLIGR+F+D ++ +D K  P+ ++N  +G  ++     + +++ +SP +ISA IL KMKETAE++LG+++
Sbjct:    1 MSKVIGIDLGTTNSCVAIMDGSQPRVIENAEGARTTPSIVAFTDEERLVGQPAKRQAVTNPDNTIFGVKRLIGRRFDDSDLAKDKKNLPFAVINGGNGDAWV-----EAKSEKYSPSQISAFILGKMKETAESYLGEEV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SHEHH (Chaperone protein dnaK OS=Shewanella halifaxensis (strain HAW-EB4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 67/139 (48.20%), Postives = 97/139 (69.78%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V   G   ++ N +G+R TPS +A+T  E L+G++AK QA  NP  T++ +KRLIGR+F+D EVQRD+ + P+KI++ D G  +++ Q      K  +P +ISA IL KMK+TAE FLG+++
Sbjct:    1 MGRIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTADETLVGQSAKRQAVTNPTNTVYAIKRLIGRRFKDDEVQRDVDIMPFKIISADNGDAWVEAQ-----GKKMAPPQISAEILKKMKKTAEDFLGEEV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SHEAM (Chaperone protein dnaK OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 67/139 (48.20%), Postives = 94/139 (67.63%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V   G   +I N +G+R TPS +AFT+ E L+G+ AK QA  NP  T F +KRLIGR+F+D EVQRD+ + P+KI+  D G  ++     +   K  +P ++SA +L KMK+TAE FLG+++
Sbjct:    1 MGKIIGIDLGTTNSCVAVLDGGKARVIENAEGDRTTPSIIAFTEDETLVGQPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQADNGDAWV-----ESRGKKMAPPQVSAEVLKKMKKTAEDFLGEEV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS7 (Chaperone protein dnaK OS=Rhodopseudomonas sp. (strain No.7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 75/140 (53.57%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV V      ++I N +G R TPS VA TD  ERL+G+ AK QA  NP+RT F VKRLIGR+++D  V++D  L PYKIV   +G  +++    DG+T  +SP ++SA IL KMKETAEA LG+K+
Sbjct:    1 MGKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTTPSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWVEA---DGKT--YSPSQVSAFILQKMKETAEAHLGQKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPT (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain TIE-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 75/140 (53.57%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV V      ++I N +G R TPS VA TD  ERL+G+ AK QA  NP+RT F VKRLIGR+++D  V++D  L PYKIV   +G  +++    DG+T  +SP ++SA IL KMKETAEA LG+K+
Sbjct:    1 MGKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTTPSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWVEA---DGKT--YSPSQVSAFILQKMKETAEAHLGQKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPA (Chaperone protein dnaK OS=Rhodopseudomonas palustris GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 75/140 (53.57%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV V      ++I N +G R TPS VA TD  ERL+G+ AK QA  NP+RT F VKRLIGR+++D  V++D  L PYKIV   +G  +++    DG+T  +SP ++SA IL KMKETAEA LG+K+
Sbjct:    1 MGKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTTPSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWVEA---DGKT--YSPSQVSAFILQKMKETAEAHLGQKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_OLICO (Chaperone protein dnaK OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV V       +I N +G R TPS VA TD  ERL+G+ AK QA  NP++TIF VKRLIGR+++D  V +D  L PYKIV   +G  +++    DG  K++SP +ISA IL KMKETAEA LG+K+
Sbjct:    1 MGKVIGIDLGTTNSCVAVMDGKSPRVIENAEGMRTTPSIVALTDDDERLVGQPAKRQAVTNPEKTIFAVKRLIGRRYDDPTVAKDKDLVPYKIVKASNGDAWVEA---DG--KIYSPSQISAFILQKMKETAEAHLGQKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_DESOH (Chaperone protein dnaK OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +   IGIDLGTT SCV V + G  ++I N +G R TPS VA   D ERL+G+ AK QA  NP+ T+F VKRLIGRKF+  EVQ D+K+ PYKI  + G   +++ +RD   K +SP EIS+ IL  +K TAE +LG+K+
Sbjct:    1 MAKTIGIDLGTTNSCVAVMEGGEAKVITNPEGGRTTPSIVAINEDGERLVGQVAKRQAITNPENTVFGVKRLIGRKFDSAEVQHDIKVLPYKI-EKAGNGDLRINLRD---KQYSPAEISSFILADIKHTAEEYLGEKV 135          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CELJU1.204e-3152.14Chaperone protein dnaK OS=Cellvibrio japonicus (st... [more]
DNAK_XANP21.573e-3152.14Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]
DNAK_SILST1.573e-3148.92Chaperone protein dnaK OS=Silicibacter sp. (strain... [more]
DNAK_SHEHH1.573e-3148.20Chaperone protein dnaK OS=Shewanella halifaxensis ... [more]
DNAK_SHEAM1.573e-3148.20Chaperone protein dnaK OS=Shewanella amazonensis (... [more]
DNAK_RHOS71.573e-3153.57Chaperone protein dnaK OS=Rhodopseudomonas sp. (st... [more]
DNAK_RHOPT1.573e-3153.57Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_RHOPA1.573e-3153.57Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_OLICO1.573e-3154.29Chaperone protein dnaK OS=Oligotropha carboxidovor... [more]
DNAK_DESOH1.573e-3151.08Chaperone protein dnaK OS=Desulfococcus oleovorans... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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