FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HELPS (Chaperone protein dnaK OS=Helicobacter pylori (strain Shi470) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT S + VY+    +IIAN +G   TPS VAFTD  E L+GE+AK QA  NP++TI+ +KR++G  F + + +   K  PYKIV+R+G   I++       KV++P+EISA IL K+KE AE++LG+ +
Sbjct:    1 MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEI-----SGKVYTPQEISAKILMKLKEDAESYLGESV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HELPH (Chaperone protein dnaK OS=Helicobacter pylori (strain HPAG1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT S + VY+    +IIAN +G   TPS VAFTD  E L+GE+AK QA  NP++TI+ +KR++G  F + + +   K  PYKIV+R+G   I++       KV++P+EISA IL K+KE AE++LG+ +
Sbjct:    1 MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEI-----SGKVYTPQEISAKILMKLKEDAESYLGESV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HELPG (Chaperone protein dnaK OS=Helicobacter pylori (strain G27) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT S + VY+    +IIAN +G   TPS VAFTD  E L+GE+AK QA  NP++TI+ +KR++G  F + + +   K  PYKIV+R+G   I++       KV++P+EISA IL K+KE AE++LG+ +
Sbjct:    1 MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEI-----SGKVYTPQEISAKILMKLKEDAESYLGESV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HELP2 (Chaperone protein dnaK OS=Helicobacter pylori (strain P12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT S + VY+    +IIAN +G   TPS VAFTD  E L+GE+AK QA  NP++TI+ +KR++G  F + + +   K  PYKIV+R+G   I++       KV++P+EISA IL K+KE AE++LG+ +
Sbjct:    1 MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEI-----SGKVYTPQEISAKILMKLKEDAESYLGESV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORGA (Chaperone protein dnaK OS=Borrelia garinii GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 71/142 (50.00%), Postives = 95/142 (66.90%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKI---VNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + ++G   +I N +G R TPS VA+T+  ERL+G+ AKNQ   NP+ TI+ +KR +GR+FE  EV  ++K+ PYKI   +N D +  I         K  SP EISA  LTKMKETAEA+LG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFE--EVASEIKMVPYKIEKGLNGDARVNI-----SNIKKQMSPPEISAATLTKMKETAEAYLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORBZ (Chaperone protein dnaK OS=Borrelia burgdorferi (strain ZS7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 71/142 (50.00%), Postives = 95/142 (66.90%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKI---VNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + ++G   +I N +G R TPS VA+T+  ERL+G+ AKNQ   NP+ TI+ +KR +GR+FE  EV  ++K+ PYKI   +N D +  I         K  SP EISA  LTKMKETAEA+LG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFE--EVASEIKMVPYKIEKGLNGDARVNI-----SNIKKQMSPPEISAATLTKMKETAEAYLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORBU (Chaperone protein dnaK OS=Borrelia burgdorferi GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 71/142 (50.00%), Postives = 95/142 (66.90%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKI---VNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + ++G   +I N +G R TPS VA+T+  ERL+G+ AKNQ   NP+ TI+ +KR +GR+FE  EV  ++K+ PYKI   +N D +  I         K  SP EISA  LTKMKETAEA+LG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFE--EVASEIKMVPYKIEKGLNGDARVNI-----SNIKKQMSPPEISAATLTKMKETAEAYLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORAP (Chaperone protein dnaK OS=Borrelia afzelii (strain PKo) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 71/142 (50.00%), Postives = 95/142 (66.90%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKI---VNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + ++G   +I N +G R TPS VA+T+  ERL+G+ AKNQ   NP+ TI+ +KR +GR+FE  EV  ++K+ PYKI   +N D +  I         K  SP EISA  LTKMKETAEA+LG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFE--EVASEIKMVPYKIEKGLNGDARVNI-----SNIKKQMSPPEISAATLTKMKETAEAYLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BLOPB (Chaperone protein dnaK OS=Blochmannia pennsylvanicus (strain BPEN) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 65/140 (46.43%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + +     ++ N +G+R TPS +A+T D E L+G+ AK Q+  NP  T+F +KRLIGR+F+D EVQRD+ + PYKI++ D G  ++ V     + +  +P ++SA IL KMK+TAE +LG++I
Sbjct:    1 MGKIIGIDLGTTNSCVAIIEGNKPRVLENSEGDRTTPSIIAYTQDGEILVGQPAKRQSVTNPKNTLFAIKRLIGRRFQDTEVQRDVNIMPYKIISADNGDAWLDV-----KGQKMAPPQVSAEILKKMKKTAEDYLGEQI 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_AERS4 (Chaperone protein dnaK OS=Aeromonas salmonicida (strain A449) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 67/140 (47.86%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       +I N +G+R TPS +A+ D  E L+G+ AK QA  NP  T+F +KRLIGR+FED+EVQRD+K+ PY I   D G  +++V     + K  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAILDGDTARVIENAEGDRTTPSIIAYADDGEILVGQPAKRQAITNPKNTLFAIKRLIGRRFEDEEVQRDLKIMPYAIAKADNGDAWVEV-----KGKKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HELPS1.922e-2948.20Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_HELPH1.922e-2948.20Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_HELPG1.922e-2948.20Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_HELP21.922e-2948.20Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_BORGA1.922e-2950.00Chaperone protein dnaK OS=Borrelia garinii GN=dnaK... [more]
DNAK_BORBZ1.922e-2950.00Chaperone protein dnaK OS=Borrelia burgdorferi (st... [more]
DNAK_BORBU1.922e-2950.00Chaperone protein dnaK OS=Borrelia burgdorferi GN=... [more]
DNAK_BORAP1.922e-2950.00Chaperone protein dnaK OS=Borrelia afzelii (strain... [more]
DNAK_BLOPB1.922e-2946.43Chaperone protein dnaK OS=Blochmannia pennsylvanic... [more]
DNAK_AERS41.922e-2947.86Chaperone protein dnaK OS=Aeromonas salmonicida (s... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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