FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK2_VIBF1 (Chaperone protein dnaK 2 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29
Identity = 66/139 (47.48%), Postives = 96/139 (69.06%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       ++ N +G R T S +A+TD E L+G+ AK QA  NP  T+F +KRLIGR+FED+EVQRD+++ P+KIV  D G  +++ +      K+ +P ++SA +L KMK+TAE FLG+++
Sbjct:    1 MGKIIGIDLGTTNSCVAVLDGDTPRVLENAEGERTTASVIAYTDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDEEVQRDIEIMPFKIVKADNGDAWVEAK----GQKMAAP-QVSAEVLKKMKKTAEDFLGEEV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.511e-29
Identity = 66/140 (47.14%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V      ++I N +G+R TPS +A++ D E L+G+ AK QA  NP  T+F +KRLIGR+FEDKEVQRD+ + P+ I+  D G  ++Q      + +  +P +ISA +L KMK+TAE +LG+++
Sbjct:    1 MGRIIGIDLGTTNSCVAVLDGEKAKVIENAEGDRTTPSIIAYSQDGETLVGQPAKRQAITNPKNTLFAIKRLIGRRFEDKEVQRDIDIMPFDIIKADNGDAWVQ-----AKDEKLAPPQISAEVLKKMKKTAEDYLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HELPJ (Chaperone protein dnaK OS=Helicobacter pylori J99 GN=dnaK PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.511e-29
Identity = 66/139 (47.48%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT S + VY+    +IIAN +G   TPS VAFTD  E L+GE+AK QA  NP++TI+ +KR++G  F + + +   K  PYKIV+R+G   I++       K+++P+EISA IL K+KE AE++LG+ +
Sbjct:    1 MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEI-----SGKIYTPQEISAKILMKLKEDAESYLGESV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_DESDG (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain G20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.511e-29
Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + +    + I N +G R TPS V FTD ERL+G+ AK QA  NP+RT+F +KRL+GRK +  EV R  + +PY+IV   +G  Y+++     E + +SP E+SAM+L K+K  AEA+LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVYIMEGKDPKCITNPEGGRTTPSVVGFTDKERLVGDIAKRQAVTNPERTVFAIKRLMGRKADAPEVARWKEHSPYQIVAGPNGDAYVEI-----EGRKYSPAEVSAMVLAKLKADAEAYLGETV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CITK8 (Chaperone protein dnaK OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=dnaK PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.511e-29
Identity = 65/140 (46.43%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + PYKI+  D G  ++ V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAWLDV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP75_CHICK (Stress-70 protein, mitochondrial OS=Gallus gallus GN=HSPA9 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 693
            EA K G VIGIDLGTT SCV V +    +++ N +G R TPS VAFT D ERL+G  AK QA  NP  T +  KRLIGR+F+D EV++D+K  P+KIV   +G  ++     +   K++SP +I A +L KMKETAE +LG
Sbjct:   51 EAIK-GAVIGIDLGTTNSCVAVMEGKQAKVLENSEGARTTPSVVAFTADGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWV-----EAHGKLYSPSQIGAFVLMKMKETAENYLG 185          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_PSEFS (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain SBW25) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/140 (48.57%), Postives = 98/140 (70.00%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V +NG  ++I N +G R TPS +A+  D E L+G++AK QA  NP  T++ VKRLIGRKF+++ VQ+D+K+ PYKI   D G  +++V       K+ +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVSVMENGKAKVIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRKFDEEVVQKDIKMVPYKIAKADNGDAWVEV----NGNKMSAP-QISAEVLKKMKKTAEDYLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_NITEC (Chaperone protein dnaK OS=Nitrosomonas eutropha (strain C91) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 67/140 (47.86%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGK-PYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  +IGIDLGTT SCV V +N   ++I N +G R TPS VA+  D+E L+G +AK QA  NP+ T+F +KRLIGRKF+++ VQ+D+ + PYKIV  D    +I+V+ R       +P E+SA +L KMK+TAE +LG+ +
Sbjct:    1 MAKIIGIDLGTTNSCVAVMENNKPKVIENAEGTRTTPSIVAYAEDNEVLVGASAKRQAVTNPENTLFAIKRLIGRKFDEEVVQKDISVTPYKIVRADNNDAWIEVRGRK-----IAPPEVSAQVLMKMKKTAEDYLGESV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_NEIG1 (Chaperone protein dnaK OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  VIGIDLGTT SC+ + +NG  ++I N +G R TPS +A+ D  E L+G  AK QA  N   TI+  KRLIG KFEDKEVQRD++  P++I+  D G  +++ Q      K  SP +ISA +L KMKE AEA+LG+K+
Sbjct:    1 MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSIIAYLDGGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKADNGDAWVKAQ-----GKELSPPQISAEVLRKMKEAAEAYLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP7 (Chaperone protein dnaK OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/140 (48.57%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + PYKIV  D G  ++ V+     TK  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIVAADNGDAWLDVK----GTKT-APPQISAEVLKKMKKTAEDYLGEPV 135          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK2_VIBF11.922e-2947.48Chaperone protein dnaK 2 OS=Vibrio fischeri (strai... [more]
DNAK_PSEA62.511e-2947.14Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]
DNAK_HELPJ2.511e-2947.48Chaperone protein dnaK OS=Helicobacter pylori J99 ... [more]
DNAK_DESDG2.511e-2947.48Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]
DNAK_CITK82.511e-2946.43Chaperone protein dnaK OS=Citrobacter koseri (stra... [more]
GRP75_CHICK3.279e-2950.35Stress-70 protein, mitochondrial OS=Gallus gallus ... [more]
DNAK_PSEFS3.279e-2948.57Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_NITEC3.279e-2947.86Chaperone protein dnaK OS=Nitrosomonas eutropha (s... [more]
DNAK_NEIG13.279e-2949.29Chaperone protein dnaK OS=Neisseria gonorrhoeae (s... [more]
DNAK_KLEP73.279e-2948.57Chaperone protein dnaK OS=Klebsiella pneumoniae su... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
back to top