FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP3 (Chaperone protein dnaK OS=Klebsiella pneumoniae (strain 342) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/140 (48.57%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + PYKIV  D G  ++ V+     TK  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIVAADNGDAWLDVK----GTKT-APPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HAES2 (Chaperone protein dnaK OS=Haemophilus somnus (strain 2336) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 69/140 (49.29%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       +I N +G R TPS +A+T D+E L+G+ AK QA  NP  T+F +KRLIGR+FED+EVQRD+ + P++I   D G  ++ V+   GE    +P +ISA +L KMK+TAE FLG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGERTTPSIIAYTNDNETLVGQPAKRQAVTNPKNTLFAIKRLIGRRFEDQEVQRDVAIMPFEITKADNGDAWVSVK---GEK--MAPPQISAEVLKKMKKTAEDFLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HAES1 (Chaperone protein dnaK OS=Haemophilus somnus (strain 129Pt) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 69/140 (49.29%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       +I N +G R TPS +A+T D+E L+G+ AK QA  NP  T+F +KRLIGR+FED+EVQRD+ + P++I   D G  ++ V+   GE    +P +ISA +L KMK+TAE FLG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGERTTPSIIAYTNDNETLVGQPAKRQAVTNPKNTLFAIKRLIGRRFEDQEVQRDVAIMPFEITKADNGDAWVSVK---GEK--MAPPQISAEVLKKMKKTAEDFLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_DESAH (Chaperone protein dnaK OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/140 (48.57%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKI-VNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V + G  ++I N +GNR TPS VA T+  +RL+G+ AK QA  NP+ T+F VKRLIGRKF+  ++Q D K+ PYKI  + +G   I ++      K  SP EIS+ IL  +K+TAE +LG+++
Sbjct:    1 MGKIIGIDLGTTNSCVAVMEAGEPKVITNSEGNRTTPSVVALTEGGDRLVGQTAKRQAITNPENTVFGVKRLIGRKFDSPQIQGDKKVLPYKIEASANGDTRINLR-----GKQHSPAEISSFILANIKKTAEDYLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_DECAR (Chaperone protein dnaK OS=Dechloromonas aromatica (strain RCB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + + G  ++I N +G R TPS + +T D E L G  AK QA  NP  T++ VKRLIGR+FE+KEVQ+D+ L P+KIV  D      V+ RD   K  +P ++SA +L KMK+TAE +LG+++
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEGGQPKVIENAEGARTTPSIIGYTEDGEILCGAPAKRQAVTNPKNTLYAVKRLIGRRFEEKEVQKDISLMPFKIVKADNGD-AWVEARD---KKIAPPQVSAEVLRKMKKTAEDYLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BURXL (Chaperone protein dnaK OS=Burkholderia xenovorans (strain LB400) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + +   V++I N +G R TPS +A+  D E L+G  AK Q+  NP  T++ VKRLIGR+FE+KEVQ+D+ L PYKI+  D      V++RD   +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEGNSVKVIENSEGARTTPSIIAYMEDGEILVGAPAKRQSVTNPKNTLYAVKRLIGRRFEEKEVQKDIGLMPYKIIKADNGD-AWVEVRD---QKLAPPQISAEVLRKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORRA (Chaperone protein dnaK OS=Borrelia recurrentis (strain A1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/140 (48.57%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKI-VNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + ++G   +I N +G R TPS VA+T+  ERL+G+ AKNQ   NP+ TI+ +KR +GR+FE  EV  ++K+ PYK+   ++G   + +       K  SP EISA  LTKMKETAEA+LG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFE--EVASEIKMVPYKVEKGQNGDARVNI---SNIKKQMSPPEISAATLTKMKETAEAYLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORDL (Chaperone protein dnaK OS=Borrelia duttonii (strain Ly) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/140 (48.57%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKI-VNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + ++G   +I N +G R TPS VA+T+  ERL+G+ AKNQ   NP+ TI+ +KR +GR+FE  EV  ++K+ PYK+   ++G   + +       K  SP EISA  LTKMKETAEA+LG+K+
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEHGKPVVIQNSEGGRTTPSIVAYTNKGERLVGQVAKNQMVTNPENTIYSIKRFMGRRFE--EVASEIKMVPYKVEKGQNGDARVNI---SNIKKQMSPPEISAATLTKMKETAEAYLGEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK2_COLP3 (Chaperone protein dnaK 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 67/140 (47.86%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V     V +I N +G+R TPS + +T + E L+G+ AK Q+  NP+ T++ +KRLIGR+FEDKE QRD+ + P+ IV  D G  ++QV+   GE    +P ++SA +L KMK+TAE FLG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAVLDGDSVRVIENAEGDRTTPSIIGYTAEGETLVGQPAKRQSVTNPENTLYAIKRLIGRRFEDKETQRDIDIMPFGIVKADNGDAWVQVK---GEK--IAPPQVSAEVLKKMKKTAEDFLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP75_PONAB (Stress-70 protein, mitochondrial OS=Pongo abelii GN=HSPA9 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 70/141 (49.65%), Postives = 94/141 (66.67%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 693
            EA K G V+GIDLGTT SCV V +    +++ N +G R TPS VAFT D ERL+G  AK QA  NP+ T +  KRLIGR+++D EVQ+D+K  P+KIV   +G  ++     +   K++SP +I A +L KMKETAE +LG
Sbjct:   49 EAIK-GAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWV-----EAHGKLYSPSQIGAFVLMKMKETAENYLG 183          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_KLEP33.279e-2948.57Chaperone protein dnaK OS=Klebsiella pneumoniae (s... [more]
DNAK_HAES23.279e-2949.29Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_HAES13.279e-2949.29Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_DESAH3.279e-2948.57Chaperone protein dnaK OS=Desulfobacterium autotro... [more]
DNAK_DECAR3.279e-2948.92Chaperone protein dnaK OS=Dechloromonas aromatica ... [more]
DNAK_BURXL3.279e-2948.20Chaperone protein dnaK OS=Burkholderia xenovorans ... [more]
DNAK_BORRA3.279e-2948.57Chaperone protein dnaK OS=Borrelia recurrentis (st... [more]
DNAK_BORDL3.279e-2948.57Chaperone protein dnaK OS=Borrelia duttonii (strai... [more]
DNAK2_COLP33.279e-2947.86Chaperone protein dnaK 2 OS=Colwellia psychrerythr... [more]
GRP75_PONAB4.283e-2949.65Stress-70 protein, mitochondrial OS=Pongo abelii G... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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