FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP75_HUMAN (Stress-70 protein, mitochondrial OS=Homo sapiens GN=HSPA9 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 70/141 (49.65%), Postives = 94/141 (66.67%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 693
            EA K G V+GIDLGTT SCV V +    +++ N +G R TPS VAFT D ERL+G  AK QA  NP+ T +  KRLIGR+++D EVQ+D+K  P+KIV   +G  ++     +   K++SP +I A +L KMKETAE +LG
Sbjct:   49 EAIK-GAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWV-----EAHGKLYSPSQIGAFVLMKMKETAENYLG 183          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_VESOH (Chaperone protein dnaK OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 68/141 (48.23%), Postives = 98/141 (69.50%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSER-LIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  +IGIDLGTT SCV +   G V+II N +G+R TPS +A+  DSE  L+G+AAK QA  NP+ T++ +KRLIGR+FE+  VQ+D+ L PYKIV  D G  +++V     + K  +  EISA ++ KMK+TAE +LG+++
Sbjct:    1 MSKIIGIDLGTTNSCVAIMDGGSVKIIENSEGDRTTPSIIAYPKDSEEVLVGQAAKRQAVTNPENTLYAIKRLIGRRFEEDAVQKDIDLVPYKIVKADNGDAWVKV-----KNKKMAAPEISAKVIGKMKKTAEDYLGEEV 136          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 64/140 (45.71%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SC+ + +     ++ N +G+R TPS +A+T D E L+G+ AK Q+  NP  T+F +KRLIGR+++D+EVQRD+ + PYKIV  D G  +++V     + +  +P +ISA IL KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCIAIIEGSKPRVLENSEGDRTTPSIIAYTQDGEILVGQPAKRQSVTNPQNTLFAIKRLIGRRYQDEEVQRDVSIMPYKIVAADNGDAWLEV-----KGQKMAPPQISAEILKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SHELP (Chaperone protein dnaK OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 65/139 (46.76%), Postives = 91/139 (65.47%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       +I N +G+R TPS +A+T  E L+G+ AK QA  NP  T F +KRLIGR+F+D EVQRD+ + P+KI+  D G  ++     +   K  +P ++SA IL KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAVLDGDKARVIENAEGDRTTPSIIAYTGEEVLVGQPAKRQAVTNPKNTFFAIKRLIGRRFKDDEVQRDVDIMPFKIIAADNGDAWV-----EAHDKKMAPPQVSAEILKKMKKTAEDYLGEPV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_PASMU (Chaperone protein dnaK OS=Pasteurella multocida GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 69/140 (49.29%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       +I N +G+R TPS +A+T D+E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P++IV  D G  ++ V+   GE    +P +ISA +L KMK+TAE FLG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGDRTTPSIIAYTQDNETLVGQPAKRQAVTNPKNTLFAIKRLIGRRFQDEEVQRDVSIMPFEIVAADNGDAWVGVK---GEK--MAPPQISAEVLKKMKKTAEDFLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_MANSM (Chaperone protein dnaK OS=Mannheimia succiniciproducens (strain MBEL55E) GN=dnaK PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 68/140 (48.57%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       +I N +G R TPS +A+T D+E L+G+ AK QA  NP  T+F +KRLIGR+FED+EVQRD+ + P++I+  D G  ++ V+   G+    +P +ISA +L KMK+TAE FLG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGERTTPSIIAYTQDNEVLVGQPAKRQAVTNPKNTLFAIKRLIGRRFEDQEVQRDVNIMPFQIIKADNGDAWVDVK---GDK--LAPPQISAEVLKKMKKTAEDFLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_LARHH (Chaperone protein dnaK OS=Laribacter hongkongensis (strain HLHK9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V +NG  ++I N +G R TPS VA+  D E L+G  AK QA  N   TIF  KRLIGR+FE+KEVQ+D+ L P+ IV  D G  +I V+      K  +P +ISA +L KMK+TAE +LG+++
Sbjct:    1 MGKIIGIDLGTTNSCVAVLENGQPKVIENSEGARTTPSVVAYMEDGEILVGAPAKRQAVTNAKNTIFASKRLIGRRFEEKEVQKDIDLMPFSIVKADNGDAWIDVR-----GKKLAPPQISAEVLRKMKKTAEDYLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_ENT38 (Chaperone protein dnaK OS=Enterobacter sp. (strain 638) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 66/140 (47.14%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD  + PYKI+  D G  +I V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDEAIMPYKIIGADNGDAWIDV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_DESMR (Chaperone protein dnaK OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 70/139 (50.36%), Postives = 96/139 (69.06%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V +    + + N +G R TPS VAFT  ERL+GE AK QA  NP+RTIF +KRL+GR+++  EV+  ++  PYKIV  + G  Y++V     E K +SP EISA+IL K+K+ AEA+LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVYVMEGKDPKCVTNPEGGRTTPSIVAFT-KERLVGEIAKRQAVTNPERTIFAIKRLMGRRYDAPEVKHWLEHCPYKIVEGQGGDAYVEV-----EGKKYSPAEISAIILGKLKKDAEAYLGEPV 133          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_DESDA (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 73/139 (52.52%), Postives = 92/139 (66.19%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  +IGIDLGTT SCV V +    + I N +G R TPS VAFTD ERL+GE AK QA  NP RTIF +KRL+GRKF+  EV R  + +PY IV   +G   ++V   DG T  +S  EISAMIL K+K  AEA+LG+ +
Sbjct:    1 MSKIIGIDLGTTNSCVYVMEGKDPKCITNPEGGRTTPSVVAFTDKERLVGEIAKRQAVTNPTRTIFAIKRLMGRKFDSPEVDRWKEHSPYAIVKAPNGDAGVEV---DGRT--YSSPEISAMILAKLKADAEAYLGETV 134          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP75_HUMAN4.283e-2949.65Stress-70 protein, mitochondrial OS=Homo sapiens G... [more]
DNAK_VESOH4.283e-2948.23Chaperone protein dnaK OS=Vesicomyosocius okutanii... [more]
DNAK_SODGM4.283e-2945.71Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_SHELP4.283e-2946.76Chaperone protein dnaK OS=Shewanella loihica (stra... [more]
DNAK_PASMU4.283e-2949.29Chaperone protein dnaK OS=Pasteurella multocida GN... [more]
DNAK_MANSM4.283e-2948.57Chaperone protein dnaK OS=Mannheimia succiniciprod... [more]
DNAK_LARHH4.283e-2950.71Chaperone protein dnaK OS=Laribacter hongkongensis... [more]
DNAK_ENT384.283e-2947.14Chaperone protein dnaK OS=Enterobacter sp. (strain... [more]
DNAK_DESMR4.283e-2950.36Chaperone protein dnaK OS=Desulfovibrio magneticus... [more]
DNAK_DESDA4.283e-2952.52Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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