FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORPE (Chaperone protein dnaK OS=Bordetella pertussis GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 69/140 (49.29%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  +IGIDLGTT SCV V   G V+II N +G R TPS VA+ D  E L+G  AK QA  NP  T++ VKRLIGRKF++K VQ+D+ L PY IV  D G  +++V+      K  +P ++SA +L KMK+TAE +LG+++
Sbjct:    1 MSKIIGIDLGTTNSCVAVLDGGQVKIIENAEGARTTPSIVAYMDDGETLVGAPAKRQAVANPKNTLYAVKRLIGRKFDEKAVQKDIDLMPYSIVKADNGDAWVEVR-----GKKLAPPQVSAEVLRKMKKTAEDYLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORBR (Chaperone protein dnaK OS=Bordetella bronchiseptica GN=dnaK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 69/140 (49.29%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  +IGIDLGTT SCV V   G V+II N +G R TPS VA+ D  E L+G  AK QA  NP  T++ VKRLIGRKF++K VQ+D+ L PY IV  D G  +++V+      K  +P ++SA +L KMK+TAE +LG+++
Sbjct:    1 MSKIIGIDLGTTNSCVAVLDGGQVKIIENAEGARTTPSIVAYMDDGETLVGAPAKRQAVTNPKNTLYAVKRLIGRKFDEKAVQKDIDLMPYSIVKADNGDAWVEVR-----GKKLAPPQVSAEVLRKMKKTAEDYLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK1_PHOPR (Chaperone protein dnaK 1 OS=Photobacterium profundum GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29
Identity = 69/140 (49.29%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       +I N +G R T S VA+T D E L+G+ AK QA  NP+ T++ +KRLIGR+FED+EVQRD+K+ P+KIV  D G  +++ +      K+ +P ++SA IL KMK+TAE FLG+++
Sbjct:    1 MGRIIGIDLGTTNSCVAVLDGDKPRVIENAEGERTTASVVAYTQDGETLVGQPAKRQAVTNPENTLYAIKRLIGRRFEDEEVQRDLKIMPFKIVKADNGDAWVEAK----GQKMAAP-QVSAEILKKMKKTAEDFLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP7M_PHAVU (Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 1
Query:  298 VIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            VIGIDLGTT SCV V +  + ++I N +G R TPS VAF    E L+G  AK QA  NP  T+F  KRLIGR+F+D + Q++MK+ P+KIV   +G  ++     +   + +SP +I A +LTKMKETAEA+LGK +
Sbjct:   53 VIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPFKIVKAPNGDAWV-----EANGQQYSPSQIGAFVLTKMKETAEAYLGKSV 184          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_THEYD (Chaperone protein dnaK OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 70/140 (50.00%), Postives = 91/140 (65.00%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G  IGIDLGTT S V V   G   +I N +G R TPS VAFTD  ERL+G+ AK QA  NP+ TIF +KRL+GRK+  +EVQ   K  PYKIV   +G  ++++       K +SP EISAMIL K+K+ AE +LG+ +
Sbjct:    1 MGKAIGIDLGTTNSVVAVVVGGEPVVIPNQEGQRTTPSVVAFTDKGERLVGQVAKRQAITNPENTIFSIKRLMGRKYNSQEVQEAKKRLPYKIVEAPNGDAHVEIM-----GKRYSPPEISAMILQKLKQAAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_PSEMY (Chaperone protein dnaK OS=Pseudomonas mendocina (strain ymp) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 64/140 (45.71%), Postives = 98/140 (70.00%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGK-PYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + +NG+V+++ N +G R TPS +A+  D E L+G++AK QA  NP  T++ VKRLIGR+F++  VQ+D+++ PYKIV  D    +++V       +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVSILENGNVKVLENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRRFDEDVVQKDIQMVPYKIVKADNNDAWVEV-----NGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_PHOLL (Chaperone protein dnaK OS=Photorhabdus luminescens subsp. laumondii GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 63/140 (45.00%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD+ + PYKI+  D G  +++V     + +  +P ++SA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDVAIMPYKIIAADNGDAWLEV-----KDQKMAPPQVSAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_METNO (Chaperone protein dnaK OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 72/140 (51.43%), Postives = 91/140 (65.00%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV V +    ++I N +G R TPS VAFTD  ERL+G+ AK QA  NP RT F +KRLIGR ++D   Q+D  L PY I    +G  ++     DG  K FSP +ISA  L KMKETAE++LG+ +
Sbjct:    1 MGKVIGIDLGTTNSCVAVMEGTQPKVIENAEGARTTPSIVAFTDDGERLVGQPAKRQAVTNPSRTFFAIKRLIGRTYDDPMTQKDKGLVPYAITRAGNGDAWVAA---DG--KQFSPSQISAFTLQKMKETAESYLGQPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_METCA (Chaperone protein dnaK OS=Methylococcus capsulatus GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 66/141 (46.81%), Postives = 97/141 (68.79%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 705
            +  +IGIDLGTT SCV + + G   +I N +G R TPS VAFT D+E L+G++AK QA  NP  T+F +KRLIGR+++D  VQ+D+K+ PY IV   +G  +++V       K  +P EISA +L K+K+ AEA+LG++++
Sbjct:    1 MAKIIGIDLGTTNSCVAILEGGKPRVIENSEGARTTPSIVAFTADNEVLVGQSAKRQAITNPKNTLFAIKRLIGRRYKDDVVQKDIKMVPYTIVEAENGDAWVEV-----GGKKMAPPEISARVLMKLKKDAEAYLGEEVK 136          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_JANMA (Chaperone protein dnaK OS=Janthinobacterium sp. (strain Marseille) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 68/140 (48.57%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + + G  ++I N +G R TPS +A+  D E L+G  AK QA  NP  T++ VKRLIGRKF++KEVQ+D+ + PY+IV  D G  +I V+      K  + ++ISA IL KMK+TAE +LG+++
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEGGKPKVIENSEGARTTPSVIAYQEDGEILVGAPAKRQAVTNPKNTLYAVKRLIGRKFDEKEVQKDIGMMPYQIVKADNGDAWISVR-----DKKLAAQQISAEILRKMKKTAEDYLGEEV 135          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BORPE4.283e-2949.29Chaperone protein dnaK OS=Bordetella pertussis GN=... [more]
DNAK_BORBR4.283e-2949.29Chaperone protein dnaK OS=Bordetella bronchiseptic... [more]
DNAK1_PHOPR4.283e-2949.29Chaperone protein dnaK 1 OS=Photobacterium profund... [more]
HSP7M_PHAVU5.594e-2948.91Heat shock 70 kDa protein, mitochondrial OS=Phaseo... [more]
DNAK_THEYD5.594e-2950.00Chaperone protein dnaK OS=Thermodesulfovibrio yell... [more]
DNAK_PSEMY5.594e-2945.71Chaperone protein dnaK OS=Pseudomonas mendocina (s... [more]
DNAK_PHOLL5.594e-2945.00Chaperone protein dnaK OS=Photorhabdus luminescens... [more]
DNAK_METNO5.594e-2951.43Chaperone protein dnaK OS=Methylobacterium nodulan... [more]
DNAK_METCA5.594e-2946.81Chaperone protein dnaK OS=Methylococcus capsulatus... [more]
DNAK_JANMA5.594e-2948.57Chaperone protein dnaK OS=Janthinobacterium sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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