FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HERAR (Chaperone protein dnaK OS=Herminiimonas arsenicoxydans GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 68/140 (48.57%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV + + G  ++I N +G R TPS +A+  D E L+G  AK QA  NP  T++ VKRLIGRKF++KEVQ+D+ + PY+IV  D G  +I V+      K  +P +ISA  L KMK+TAE +LG+++
Sbjct:    1 MGKIIGIDLGTTNSCVAIMEGGKPKVIENSEGARTTPSVIAYQEDGEILVGAPAKRQAVTNPKNTLYAVKRLIGRKFDEKEVQKDIGMMPYQIVKADNGDAWISVR-----DKKLAPPQISAETLRKMKKTAEDYLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_HAEDU (Chaperone protein dnaK OS=Haemophilus ducreyi GN=dnaK PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       ++ N +G R TPS +A+TD E L+G+ AK QA  NP  T+F +KRLIGR+F D EVQRD+++ P++I   D G  ++ V+   G+    +P +ISA +L KMK+TAE FLG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAVMDGDKPRVLENAEGARTTPSIIAYTDKETLVGQPAKRQAITNPKNTLFAIKRLIGRRFTDNEVQRDIEIMPFEIAKADNGDAWVNVK---GDK--LAPPQISAEVLKKMKKTAEDFLGEPV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_BORPA (Chaperone protein dnaK OS=Bordetella parapertussis GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  +IGIDLGTT SCV V   G V+II N +G R TPS VA+ D  E L+G  AK QA  NP  T++ VKRLIGRKF++K VQ+D+ L PY IV  D G  +++V       K  +P ++SA +L KMK+TAE +LG+++
Sbjct:    1 MSKIIGIDLGTTNSCVAVLDGGQVKIIENAEGARTTPSIVAYMDDGETLVGAPAKRQAVTNPKNTLYAVKRLIGRKFDEKAVQKDIDLMPYSIVKADNGDAWVEV-----HGKKLAPPQVSAEVLRKMKKTAEDYLGEEV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP75_RAT (Stress-70 protein, mitochondrial OS=Rattus norvegicus GN=Hspa9 PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 70/141 (49.65%), Postives = 93/141 (65.96%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 693
            EA K G V+GIDLGTT SCV V +    +++ N +G R TPS VAFT D ERL+G  AK QA  NP+ T +  KRLIGR+++D EVQ+D K  P+KIV   +G  ++     +   K++SP +I A +L KMKETAE +LG
Sbjct:   49 EAIK-GAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTPDGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDTKNVPFKIVRASNGDAWV-----EAHGKLYSPSQIGAFVLMKMKETAENYLG 183          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP75_MOUSE (Stress-70 protein, mitochondrial OS=Mus musculus GN=Hspa9 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 70/141 (49.65%), Postives = 93/141 (65.96%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 693
            EA K G V+GIDLGTT SCV V +    +++ N +G R TPS VAFT D ERL+G  AK QA  NP+ T +  KRLIGR+++D EVQ+D K  P+KIV   +G  ++     +   K++SP +I A +L KMKETAE +LG
Sbjct:   49 EAIK-GAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDTKNVPFKIVRASNGDAWV-----EAHGKLYSPSQIGAFVLMKMKETAENYLG 183          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERPY (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERPS (Chaperone protein dnaK OS=Yersinia pseudotuberculosis GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERPP (Chaperone protein dnaK OS=Yersinia pestis (strain Pestoides F) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERPN (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERPG (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Angola) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HERAR5.594e-2948.57Chaperone protein dnaK OS=Herminiimonas arsenicoxy... [more]
DNAK_HAEDU5.594e-2947.48Chaperone protein dnaK OS=Haemophilus ducreyi GN=d... [more]
DNAK_BORPA5.594e-2949.29Chaperone protein dnaK OS=Bordetella parapertussis... [more]
GRP75_RAT7.305e-2949.65Stress-70 protein, mitochondrial OS=Rattus norvegi... [more]
GRP75_MOUSE7.305e-2949.65Stress-70 protein, mitochondrial OS=Mus musculus G... [more]
DNAK_YERPY7.305e-2945.71Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPS7.305e-2945.71Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPP7.305e-2945.71Chaperone protein dnaK OS=Yersinia pestis (strain ... [more]
DNAK_YERPN7.305e-2945.71Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERPG7.305e-2945.71Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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