FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERPE (Chaperone protein dnaK OS=Yersinia pestis GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERPB (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERPA (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERP3 (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_YERE8 (Chaperone protein dnaK OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 64/140 (45.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+E QRD  + PYKI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTKARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIIAADNGDAWLEV-----KGQKIAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_ROSDO (Chaperone protein dnaK OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  VIGIDLGTT SC+ +       ++ N +G R TPS VAFTD ERL+G+ AK QA  NPD TIF VKRLIGR+ +D  + +D K  P+ +++  +G  +++ +   GE   +SP +ISA IL KMKETAE++LG+ +
Sbjct:    1 MSKVIGIDLGTTNSCIAIMDGSQPRVVENAEGARTTPSIVAFTDDERLVGQPAKRQAVTNPDNTIFGVKRLIGRRNDDAALAKDKKNLPFAVIDGGNGDAWVEAK---GEK--YSPSQISAFILGKMKETAESYLGEDV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_PASHA (Chaperone protein dnaK OS=Pasteurella haemolytica GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV V       +I N +G R TPS +A+TD E L+G+ AK QA  NP  T+F +KRLIGR+F D EVQRD+++ P++I   D G  ++ V+   G+    +P +ISA IL KMK+TAE FLG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGARTTPSIIAYTDKETLVGQPAKRQAITNPKNTLFAIKRLIGRRFTDAEVQRDIEIMPFEISKADNGDAWVTVK---GDK--LAPPQISAEILKKMKKTAEDFLGEPV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTR (Chaperone protein dnaK OS=Chlamydia trachomatis GN=dnaK PE=1 SV=4)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 70/143 (48.95%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            E  K   +IGIDLGTT SCV V + G  ++IA+ +G R TPS VAF   E L+G  AK QA  NP++T+   KR IGRKF   EV+ ++K  PYK+  N  G       + D E K+++PEEI A IL KMKETAEA+LG+ +
Sbjct:    3 EKRKSNKIIGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKF--SEVESEIKTVPYKVAPNSKGD-----AVFDVEQKLYTPEEIGAQILMKMKETAEAYLGETV 138          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTB (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 70/143 (48.95%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            E  K   +IGIDLGTT SCV V + G  ++IA+ +G R TPS VAF   E L+G  AK QA  NP++T+   KR IGRKF   EV+ ++K  PYK+  N  G       + D E K+++PEEI A IL KMKETAEA+LG+ +
Sbjct:    3 EKRKSNKIIGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKF--SEVESEIKTVPYKVAPNSKGD-----AVFDVEQKLYTPEEIGAQILMKMKETAEAYLGETV 138          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTA (Chaperone protein dnaK OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 70/143 (48.95%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            E  K   +IGIDLGTT SCV V + G  ++IA+ +G R TPS VAF   E L+G  AK QA  NP++T+   KR IGRKF   EV+ ++K  PYK+  N  G       + D E K+++PEEI A IL KMKETAEA+LG+ +
Sbjct:    3 EKRKSNKIIGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKF--SEVESEIKTVPYKVAPNSKGD-----AVFDVEQKLYTPEEIGAQILMKMKETAEAYLGETV 138          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_YERPE7.305e-2945.71Chaperone protein dnaK OS=Yersinia pestis GN=dnaK ... [more]
DNAK_YERPB7.305e-2945.71Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPA7.305e-2945.71Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERP37.305e-2945.71Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERE87.305e-2945.71Chaperone protein dnaK OS=Yersinia enterocolitica ... [more]
DNAK_ROSDO7.305e-2947.48Chaperone protein dnaK OS=Roseobacter denitrifican... [more]
DNAK_PASHA7.305e-2948.92Chaperone protein dnaK OS=Pasteurella haemolytica ... [more]
DNAK_CHLTR7.305e-2948.95Chaperone protein dnaK OS=Chlamydia trachomatis GN... [more]
DNAK_CHLTB7.305e-2948.95Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLTA7.305e-2948.95Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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