FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT2 (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 70/143 (48.95%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  277 EATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            E  K   +IGIDLGTT SCV V + G  ++IA+ +G R TPS VAF   E L+G  AK QA  NP++T+   KR IGRKF   EV+ ++K  PYK+  N  G       + D E K+++PEEI A IL KMKETAEA+LG+ +
Sbjct:    3 EKRKSNKIIGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKF--SEVESEIKTVPYKVAPNSKGD-----AVFDVEQKLYTPEEIGAQILMKMKETAEAYLGETV 138          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CARRP (Chaperone protein dnaK OS=Carsonella ruddii (strain PV) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 67/140 (47.86%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLI-GEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV-NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  +IGIDLGTT SC+ V  NG  ++I N +G R TPS V +T+  R+I G  AK QA  NP  T++ +KRLIGRKF+D  VQ+D+K+ PYKI+ + +G  +++V     + K  +P +ISA IL KMK TAE FL +K+
Sbjct:    1 MSKIIGIDLGTTNSCIAVLSNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPKNTLYAIKRLIGRKFKDDIVQKDIKMVPYKIISSENGDAWVEV-----KDKKLAPPQISAEILKKMKITAENFLNEKV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_CAMC5 (Chaperone protein dnaK OS=Campylobacter curvus (strain 525.92) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  VIGIDLGTT SCV VY+ G  ++I N +G   TPS VAFTD  E L+G+ AK QA  NP++TI+ +KR++G    +K  Q      PY +V+R+G   +++       KV++P+EISA IL K+KE AEA+LG+K+
Sbjct:    1 MAKVIGIDLGTTNSCVSVYERGESKVIPNKEGKNTTPSVVAFTDKGEVLVGDVAKRQAVTNPEKTIYSIKRIMGLMSNEKNAQEAKARLPYHVVDRNGACAVEI-----AGKVYTPQEISAKILMKLKEDAEAYLGEKV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP75_CRIGR (Stress-70 protein, mitochondrial OS=Cricetulus griseus GN=HSPA9 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 67/136 (49.26%), Postives = 90/136 (66.18%), Query Frame = 1
Query:  292 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVN-RDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 693
            G V+GIDLGTT SCV V +    +++ N +G R TPS VAFT D ERL+G  AK QA  NP+ T +  KRLIGR+++D EVQ+D K  P+KIV   +G  ++     +   K++SP +I A +L KMKETAE +LG
Sbjct:   53 GAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDTKNVPFKIVRASNGDAWV-----EAHGKLYSPSQIGAFVLMKMKETAENYLG 183          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_THERP (Chaperone protein dnaK OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dnaK PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 68/139 (48.92%), Postives = 97/139 (69.78%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDS-ERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT S + V + G   +I N +G R+TPS VA T + ERL+G  AK QA  NP+ TI+ +KR +GR+F+D EVQR +KL PY+ V R     ++V++ D   + ++P+EISAMIL K+K+ AEA+LG+ +
Sbjct:    1 MGRVIGIDLGTTNSVMAVIEGGEPVVIPNAEGERLTPSVVAITPTGERLVGRFAKRQAITNPENTIYSIKRFMGRRFDDPEVQRTIKLVPYQ-VRRAQNGGVEVKMGD---RWYTPQEISAMILQKLKQDAEAYLGETV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SULNB (Chaperone protein dnaK OS=Sulfurovum sp. (strain NBC37-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTD-SERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G V+GIDLGTT S + VY NG   IIAN +G   TPS VAFTD  E L+GE+AK QA  NP++TI+ +KR++G   E+++     +  PY I++R+G   I+V       K ++P+EISA +L KMKE AEA+LG+ +
Sbjct:    1 MGKVLGIDLGTTNSAMAVYTNGEAAIIANKEGKNTTPSIVAFTDKGEVLVGESAKRQAVTNPEKTIYSIKRIMGLMCEEEKANEAKERLPYHIIDRNGACAIEV-----AGKTYTPQEISAKVLMKMKEDAEAYLGETV 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SHISS (Chaperone protein dnaK OS=Shigella sonnei (strain Ss046) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 64/140 (45.71%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SHIDS (Chaperone protein dnaK OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 64/140 (45.71%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_SHIBS (Chaperone protein dnaK OS=Shigella boydii serotype 4 (strain Sb227) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 64/140 (45.71%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G +IGIDLGTT SCV +       ++ N +G+R TPS +A+T D E L+G+ AK QA  NP  T+F +KRLIGR+F+D+EVQRD+ + P+KI+  D G  +++V     + +  +P +ISA +L KMK+TAE +LG+ +
Sbjct:    1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV-----KGQKMAPPQISAEVLKKMKKTAEDYLGEPV 135          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: DNAK_RICPU (Chaperone protein dnaK OS=Rickettsia peacockii (strain Rustic) GN=dnaK PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29
Identity = 67/139 (48.20%), Postives = 90/139 (64.75%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRD-GKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +G VIGIDLGTT SCV V +    ++I N +G R TPS +AF + E+L+G++AK QA  N   TI+ VKRLIGR F D  V++D  + PY IV  D G  ++     + +   +SP +ISA IL KMKETAE +LG K+
Sbjct:    1 MGKVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAFANGEKLVGQSAKRQAVTNHRNTIYAVKRLIGRNFIDPMVKKDQGIVPYNIVKADNGDAWV-----EADNNKYSPSQISAFILQKMKETAENYLGDKV 134          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHLT27.305e-2948.95Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CARRP7.305e-2947.86Chaperone protein dnaK OS=Carsonella ruddii (strai... [more]
DNAK_CAMC57.305e-2946.76Chaperone protein dnaK OS=Campylobacter curvus (st... [more]
GRP75_CRIGR9.541e-2949.26Stress-70 protein, mitochondrial OS=Cricetulus gri... [more]
DNAK_THERP9.541e-2948.92Chaperone protein dnaK OS=Thermomicrobium roseum (... [more]
DNAK_SULNB9.541e-2947.48Chaperone protein dnaK OS=Sulfurovum sp. (strain N... [more]
DNAK_SHISS9.541e-2945.71Chaperone protein dnaK OS=Shigella sonnei (strain ... [more]
DNAK_SHIDS9.541e-2945.71Chaperone protein dnaK OS=Shigella dysenteriae ser... [more]
DNAK_SHIBS9.541e-2945.71Chaperone protein dnaK OS=Shigella boydii serotype... [more]
DNAK_RICPU9.541e-2948.20Chaperone protein dnaK OS=Rickettsia peacockii (st... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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