FC931174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931174 vs. ExPASy Swiss-Prot
Match: PP2B6_ARATH (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.567e-27 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 60 DLLPEDCFAHILSYTSPRDACRLSLVSSTVRFAADSDNVWEKFLPVDYMEILPRLVLPLVYFSKKELFTRLC-SPVLID 293 D LPEDC ++I+S+TSPRD C + VS + A D++WEKFLP +Y ++P V+ SKK+L+ LC PVL++ Sbjct: 46 DDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPPW---RVFSSKKDLYFTLCYDPVLVE 121 HSP 2 Score: 71.2478 bits (173), Expect = 1.567e-27 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 295 KTFSLEKSTSKKRYILGARELSITWANNPLYWTWKPFLQSRFTEVAELRTISWLQITGKINTKTISPKTQYAAYLIVKFAERAFGLDSLPSEVSL 579 K+F LE ++ KK +L A+EL IT NNP YW W +S F +V EL Q+ G ++T+ +S T Y+ Y++ K + GL LP +V + Sbjct: 125 KSFWLETASGKKCVLLAAKELWITGGNNPEYWQWIELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDERHGLRDLPIQVGV 219
BLAST of FC931174 vs. ExPASy Swiss-Prot
Match: PP2B5_ARATH (F-box protein PP2-B5 OS=Arabidopsis thaliana GN=PP2B5 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-25 Identity = 40/118 (33.90%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 298 TFSLEKSTSKKRYILGARELSITWANNPLYWTWKPFLQSRFTEVAELRTISWLQITGKINTKTISPKTQYAAYLIVKFAERAFGLDSLPSEVSLEVGNG-SXQSQGTAYLRWQERKIQ 648 +F L+K++ KK +L A++L I+ NP YW W +SRF EV EL I I G +NT+ ISP T Y+AY++ G + P ++ G G ++R+ +K Q Sbjct: 116 SFRLDKASGKKCVMLSAKKLLISRVVNPKYWKWISIPESRFDEVPELLNIDSFDIRGVLNTRIISPGTHYSAYIVYTKTSHFNGFQTSP----IQAGVGFQRHGMSKTFIRFDSKKRQ 229 HSP 2 Score: 67.0106 bits (162), Expect = 1.388e-25 Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 60 DLLPEDCFAHILSYTS-PRDACRLSLVSSTVRFAADSDNVWEKFL-PVDYMEILPRLVLPLVYFSKKELFTRLCSP 281 D LP+DC A I S+TS PRDA +LVS + +SD+VWEKFL P DY+ +LP+ V+ SKKEL+ LC P Sbjct: 35 DDLPDDCLAIISSFTSTPRDAFLAALVSKSFGLQFNSDSVWEKFLPPPDYVSLLPK---SRVFSSKKELYFALCDP 107
BLAST of FC931174 vs. ExPASy Swiss-Prot
Match: PP2B7_ARATH (F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP2B7 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.276e-20 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = 3 Query: 66 LPEDCFAHILSYTSPRDACRLSLVSSTVRFAADSDNVWEKFLPVDYMEILPRLVLPLVYFSKKELFTRLC 275 LPE+C + I+S+TSPRDAC +LVS T A SD VWEKF+P +Y +L R + SKKELF LC Sbjct: 43 LPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSR---SQHFSSKKELFFALC 109 HSP 2 Score: 46.9802 bits (110), Expect = 3.276e-20 Identity = 27/86 (31.40%), Postives = 47/86 (54.65%), Query Frame = 1 Query: 295 KTFSLEKSTSKKRYILGARELSITWANNPLYWTWKPFLQSRFTE-VAELRTISWLQITGKINTKTISPKTQYAAYLIVKFAERAFG 549 K +EK+T K+ +L A L+++ + W W S + E V EL T W +I + NT+ +SP+T+Y+ Y++ A+ +G Sbjct: 120 KDLWIEKATGKRCMMLSASALNLSTHHT---WKWITNPVSAWLETVPELLTTRWFEIRCRTNTRFLSPRTRYSVYIVFLKADICYG 202
BLAST of FC931174 vs. ExPASy Swiss-Prot
Match: SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 5.548e-20 Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 3 Query: 57 VDLLPEDCFAHILSYTSPRDACRLSLVSSTVRFAADSDNVWEKFLPVDYMEILPRLVLPLVYFSKKELFTRLCSPVLIDQD 299 +D LPE C ++I+S+TSP DAC + VS A SD VWEKFLP DY + + V+ SKKEL+ LC+ L+ +D Sbjct: 24 LDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESL---ITPSRVFSSKKELYFSLCNDPLLIED 101 HSP 2 Score: 46.2098 bits (108), Expect = 5.548e-20 Identity = 30/102 (29.41%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 307 LEKSTSKKRYILGARELSIT-WANNPLYWTWKPFLQSRFTEVAELRTISWLQITGKINTKTISPKTQYAAYLIVKFAERAFGLDSLPSEVSLE-VGNGSXQS 606 LEK++ K+ +L A ++++ A+ + W P +SRF VA LR + ++NT+ +S +T+Y+ Y++ K A+ G + E + VG S +S Sbjct: 108 LEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPESRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIVFKKADNWCGFKGVSIEAVVGIVGEESFRS 209
BLAST of FC931174 vs. ExPASy Swiss-Prot
Match: PP2B3_ARATH (F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.635e-15 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 60 DLLPEDCFAHILSYTSPRDACRLSLVSSTVRFAADSDNVWEKFLPVDYMEILPRLVLPLVYFSKKELFTRLCS-PVLID 293 D LPE+C ++I+S+T+PRDAC + VS A SD+VWEKFLP+DY ++P V+ SKKEL LC P+LI+ Sbjct: 14 DGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPE---SRVFLSKKELCFSLCRVPLLIE 89 HSP 2 Score: 27.335 bits (59), Expect = 1.635e-15 Identity = 10/31 (32.26%), Postives = 21/31 (67.74%), Query Frame = 1 Query: 295 KTFSLEKSTSKKRYILGARELSITWANNPLY 387 K+F L+K++ +K +L + + I+W N+P + Sbjct: 93 KSFWLDKTSGEKCIMLSPKGMVISWVNSPQF 123
BLAST of FC931174 vs. ExPASy Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 5.741e-15 Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 3 Query: 66 LPEDCFAHILSYTSPRDACRLSLVSSTVRFAADSDNVWEKFLPVDYMEILPRLVLPLVY--FSKKELFTRLCSPVLIDQD 299 +PE C A + Y +P + C L+ ++ + R AA SD+VWEK LP +Y ++L L+ P Y SKK++F L P+ D D Sbjct: 24 IPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLD-LLPPERYHSLSKKDIFAVLSRPIPFDDD 102 HSP 2 Score: 41.9726 bits (97), Expect = 5.741e-15 Identity = 19/56 (33.93%), Postives = 31/56 (55.36%), Query Frame = 1 Query: 307 LEKSTSKKRYILGARELSITWANNPLYWTWKPFLQSRFTEVAELRTISWLQITGKI 474 +++ T + + AR +SIT + YW W P +SRF VA L+ I W ++ G + Sbjct: 108 IDRVTGRVCMAISARGMSITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGTV 163
BLAST of FC931174 vs. ExPASy Swiss-Prot
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 2.476e-11 Identity = 28/84 (33.33%), Postives = 44/84 (52.38%), Query Frame = 3 Query: 66 LPEDCFAHILSYTSPRDACRLSLVSSTVRFAADSDNVWEKFLPVDYMEILPRL--------VLPLVYFSKKELFTRLCSPVLID 293 +PE+C + Y P + C L+ V+ + A+ SD VWE LP +Y ++ R+ V + + KKE++ RLC P L D Sbjct: 24 VPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFD 107 HSP 2 Score: 36.1946 bits (82), Expect = 2.476e-11 Identity = 20/61 (32.79%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 292 TKTFSLEKSTSKKRYILGARELSITWANNPLYWTWKPFLQSRFTEVAELRTISWLQITGKI 474 TK L+K + K + + + IT ++ YW +SRF + LR I WL+ GKI Sbjct: 110 TKEAWLDKRSGKVFLAISPKAMKITGIDDRRYWEHISSDESRFGSITYLRQIWWLEAVGKI 170
BLAST of FC931174 vs. ExPASy Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 3.215e-11 Identity = 27/78 (34.62%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 66 LPEDCFAHILSYTSPRDACRLSLVSSTVRFAADSDNVWEKFLPVDYMEILPRLV--LPLVYFSKKELFTRLCSPVLID 293 LPE+C A I++ P + CRL+ ++ R A+ +D +WE LP +Y I ++ + L KK+L+ +L P L D Sbjct: 28 LPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEITLTKLIKKDLYAKLSQPNLFD 105 HSP 2 Score: 36.5798 bits (83), Expect = 3.215e-11 Identity = 19/82 (23.17%), Postives = 41/82 (50.00%), Query Frame = 1 Query: 292 TKTFSLEKSTSKKRYILGARELSITWANNPLYWTWKPFLQSRFTEVAELRTISWLQITGKINTKTISPKTQYAAYLIVKFAE 537 TK ++K+T + + ++ L IT ++ YW+ P +SRF A ++ I W ++ G+ + P Y+ + ++ + Sbjct: 108 TKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPTDESRFQSAAYVQQIWWFEVGGEFEIQ--FPSGTYSLFFRIQLGK 187 The following BLAST results are available for this feature:
BLAST of FC931174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931174 ID=FC931174; Name=FC931174; organism=Citrus clementina; type=EST; length=708bpback to top |