FC931179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931179 vs. ExPASy Swiss-Prot
Match: ISP4_SCHPO (Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe GN=isp4 PE=2 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 5.856e-47 Identity = 91/215 (42.33%), Postives = 136/215 (63.26%), Query Frame = 3 Query: 18 FALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFV 662 F+ W + PIG++QA TN Q G ++ +F++GY+ PG+P+A ++FK G I+ L+F +DLK GHYMK+PPR M+ Q++ TI S V +GV W L +I+N+C + PD+ +TCP V F++SVIWG+IGP+R+F Y L + +L G + + W L K +P+K W L N P+I G +PPATP N +W G+ FNY++ Sbjct: 499 FSAVWFI--PIGIVQAITNIQLGLNVFTEFIVGYMYPGRPLAMMIFKTVGYITMTQGLAFAADLKFGHYMKLPPRIMFYTQMIATIWSCFVQIGVLDWALGNIDNVCQAD--QPDN-YTCPNATVFFNSSVIWGVIGPKRMFSGKNTYTGLQYFWLAGVLGTILFWALWKKWPQKWWGQL-NGPLIFGGTGYIPPATPVNYLAWSGIGLFFNYYL 707
BLAST of FC931179 vs. ExPASy Swiss-Prot
Match: OPT1_YEAST (Oligopeptide transporter 1 OS=Saccharomyces cerevisiae GN=OPT1 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.383e-40 Identity = 84/218 (38.53%), Postives = 131/218 (60.09%), Query Frame = 3 Query: 12 FAFALAWIVTL----PIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFN 653 +AF +A +++L P G+++A TNQ G +II + + GY+LP +P+ANLLFK+YG I L+ DLKL YMK+ PR ++ Q+ TI+SG+VN+GV WM+ +I+ +C + + +TC R F+AS+IW L P+ LF G +Y L+W FL+G + P+ V+ + FP+ K+ I+ PV G +PP+TP N + + N Sbjct: 510 WAFVIAILISLVNFIPQGILEAMTNQHVGLNIITELICGYMLPLRPMANLLFKLYGFIVMRQGLNLSRDLKLAMYMKVSPRLIFAVQIYATIISGMVNVGVQEWMMHNIDGLCTTDQ---PNGFTCANGRTVFNASIIWSL--PKYLFSSGRIYNPLMWFFLIGLLFPLAVYAVQWKFPKFKFAKHIHTPVFFTGPGNIPPSTPYNYSLFFAMSFCLN 722
BLAST of FC931179 vs. ExPASy Swiss-Prot
Match: YQJC_SCHPO (Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe GN=SPCC1840.12 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26 Identity = 66/213 (30.99%), Postives = 112/213 (52.58%), Query Frame = 3 Query: 42 LPIGVIQA----TTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFR 668 +P+ +I++ T + Q ++I+A F G+P+A L F +G + HA+ K+GHYMK+PPR + I S +VN V W++ + ++C + + ++ TC + F++ +IWGL+G +F G Y ++W FLVGAV+ V V++L FP+ W +N ++ G A +P T N ++W FNY + R Sbjct: 516 IPLSLIESRSSFTISMQAFFEIVAAFWFN----GQPMALLYFYSFGFGTLQHAMHMTQSAKIGHYMKVPPRLVAALLFTSGIWSSLVNSAVTGWIMYHVRDVC---TSNAENNMTCRSPKTQFNSHLIWGLVG-NHIFSSDGRYSFVMWFFLVGAVVSVVVYLLQISFPKSSW-KHVNPALLLGGAAQIPSVTGINYSTWAAVAFCFNYLIRR 719
BLAST of FC931179 vs. ExPASy Swiss-Prot
Match: OPT2_YEAST (Oligopeptide transporter 2 OS=Saccharomyces cerevisiae GN=OPT2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26 Identity = 66/211 (31.28%), Postives = 116/211 (54.98%), Query Frame = 3 Query: 30 WIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPV--PVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNY 656 ++ +P ++QATT G +++ + ++GY LPG PIA ++ K +G A +++S+LK+ HY KIPP ++ Q V + VNLGV W + +I++ C + H ++++TCP ++ASV+WG IGP+R+F +Y W +L+GA + + VW F + + P++ + GM +P + +GMI +Y Sbjct: 594 FVFLIPTTILQATTGYSFGLNLLIEMVMGYALPGNPIAIMILKAFGYNIDGQADNYVSNLKIAHYCKIPPMALFRGQCVIVFIQIFVNLGVLNWQISNIKDFC---TPHQNAKFTCPDAVTYYNASVVWGAIGPKRIF--NYIYPIFKWCWLIGACIGIFFGVWKRWGKFYPRYFDPMLFV-------GGMLNMSPPYNLMYYTSGMIVSY 792 The following BLAST results are available for this feature:
BLAST of FC931179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931179 ID=FC931179; Name=FC931179; organism=Citrus clementina; type=EST; length=724bpback to top |