FC931183

Overview
NameFC931183
Unique NameFC931183
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:30..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931183 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.801e-59
Identity = 111/203 (54.68%), Postives = 143/203 (70.44%), Query Frame = 1
Query:   94 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKAL 702
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + E G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI+   +VTE  L + + AL
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNAL 206          
BLAST of FC931183 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.468e-59
Identity = 110/203 (54.19%), Postives = 143/203 (70.44%), Query Frame = 1
Query:   94 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKAL 702
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI+   +VTE  L + + AL
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMADHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNAL 206          
BLAST of FC931183 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.887e-58
Identity = 123/206 (59.71%), Postives = 147/206 (71.36%), Query Frame = 1
Query:   94 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGL-ARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALN 705
            DEL   A  I TPGKGILAADESTG++ KRL+SI +EN E NRR  R+LLF     L +Y+SGVI+F ET YQKT  GKPF  +L+E G++PGIKVDKG V +AGT GE TTQGLD L  RC +Y + GA+FAKWR V KI    PS  A+ E A+ L +RYA ICQ+NGLVPIVEPEIL DG H + +   +TE VL+  Y ALN
Sbjct:   14 DELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALN 219          
BLAST of FC931183 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.035e-56
Identity = 120/208 (57.69%), Postives = 144/208 (69.23%), Query Frame = 1
Query:   73 CFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYK 696
            C  GKY +ELIK A  + + G+GILA DES  T GKRL SI VEN E NRRA RELL   PG  QY+SG ILFEETLYQ TA+GK FVDV+KE  ++PGIKVDKG V    T   +   GLDG     + YY+AGARFAKWR+V+ I P+ PS + +   A GLARYA I Q  GLVPIVEPE+L+DG HDI++C +V E + A  +K
Sbjct:   25 CAPGKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTSAAE-YYKAGARFAKWRSVVSI-PHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFK 228          
BLAST of FC931183 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 7.436e-47
Identity = 101/210 (48.10%), Postives = 127/210 (60.48%), Query Frame = 1
Query:   79 KGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALN 705
            K  Y  ELI+ A  +  PGKG+LAADESTG+  KR + I + N   +RR  R L+    G  QY+SGVIL +ET+YQK   G+ F   L+  GV+PGIK D G   L  G  GE  T GLDG  +R +KYY  G RF KWR V KI     S+  +  NA  LARYAI+ Q  GLVPIVEPE+++DG HDI  C  V++ V +    AL+
Sbjct:   19 KTPYEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALH 228          
BLAST of FC931183 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40
Identity = 85/191 (44.50%), Postives = 122/191 (63.87%), Query Frame = 1
Query:  133 GKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALN 705
            GKGILAADE+  T+G+R   + + N E NRR  RE+LF T G  +Y+ GVIL +ET  Q + +G P  ++LK+ G+  GIK+DKG ++      E  + GL+ L  RC+      A FAKWR++       PS+  INEN + LA+YAIICQ+NGLVPIVEPE+ ++G + + +  +VT ++L+   K LN
Sbjct:   21 GKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLN 209          
The following BLAST results are available for this feature:
BLAST of FC931183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_XYLFT3.801e-5954.68Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFA8.468e-5954.19Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_CAEEL1.887e-5859.71Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALFC_CHLRE1.035e-5657.69Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_TRYBB7.436e-4748.10Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF_ENCCU3.026e-4044.50Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34102D03EF PostHarvP1 Citrus clementina cDNA clone C34102D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931183 ID=FC931183; Name=FC931183; organism=Citrus clementina; type=EST; length=705bp
GGATAAAATCGCTCTCTCTGTTTCTCCCTCTAACAAAACAAATTTTCTAT
CTTCAAGTAGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGATGAGC
TCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCCTTGCT
GCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATCAATGT
TGAGAATGTTGAGGCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCTGCA
CTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGGAGACC
CTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGGA
GGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCTTG
CTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCCAG
CGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGTGC
TGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGAGA
ATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCCTT
GTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATCAA
CAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGCTC
TGAAT
back to top