FC931185

Overview
NameFC931185
Unique NameFC931185
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length649
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAAN (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain N315) GN=hemE PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAAM (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hemE PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAAE (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain Newman) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAAC (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain COL) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAA9 (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain JH9) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAA8 (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain NCTC 8325) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAA3 (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain USA300) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAA2 (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain JH1) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_STAA1 (Uroporphyrinogen decarboxylase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  157 LLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627
            +LK ++GE+    PVW MRQAGR    Y+ + EKY  F + +   +L   ++  P   +  D  IL+ DI+TPL  + +  +I  G GPVI +PI T  +V+++ + DPE  VPYV   + +L EE  N   ++GF GAPFTLASY++EGG SK+++
Sbjct:    9 ILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYN 163
[Close]
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_LISMH (Uroporphyrinogen decarboxylase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29
Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = 1 
Query:  142 VAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHF 624
            +   + LKA R E V+R PVW MRQAGR    Y+ + EKY  F E +   ++   ++  P   +  D  IL+ DI+TPL GM +  +I  G GPVI +PI T  +V+++  F PE  VPYV   + +L +++  +  ++GF GAPFTLASY++EGG SK++
Sbjct:    4 ITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLAIFKPEIEVPYVLDTIKLLADDM-LDVPLIGFAGAPFTLASYMIEGGPSKNY 162
The following BLAST results are available for this feature:
BLAST of FC931185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_STAAN5.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_STAAM5.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_STAAE5.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_STAAC5.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_STAA95.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_STAA85.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_STAA35.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_STAA25.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_STAA15.986e-2941.40Uroporphyrinogen decarboxylase OS=Staphylococcus a... [more]
DCUP_LISMH5.986e-2941.61Uroporphyrinogen decarboxylase OS=Listeria monocyt... [more]

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Properties
Property NameValue
Genbank descriptionC34102D05EF PostHarvP1 Citrus clementina cDNA clone C34102D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931185 ID=FC931185; Name=FC931185; organism=Citrus clementina; type=EST; length=649bp
GAAAGGCCCAACACAATGCCCTGCTCTTCAATTTCGGCTATTTCAAATTT
TCCACTGTATTCCTCTTCTCACTCCAATTCAAACTCCCGATATGTCCGCT
GCGCCGTCGGAGGGACTGTAGCGGAACCGAAAAATGTTTCTGTTGCCGAA
CCCATGTTGCTGAAAGCTGTTCGAGGAGAAGATGTTGAAAGACCTCCAGT
TTGGCTTATGAGGCAAGCAGGGAGGTACATGAAGAGTTATCAAATCATCT
GCGAGAAGTATCCTTCATTTCGTGAAAGATCAGAAAATGTTGATCTTGTT
GTGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCGGATGGTGTCAT
TTTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTG
ACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGAT
GCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATA
TGTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAG
CAGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTT
GAGGGTGGTTCATCGAAGCACTTCAGCAAAAAAAGCGACTAGCTTTCTC
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