FC931192

Overview
NameFC931192
Unique NameFC931192
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14
Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 2
Query:   38 ELLSLLIVYCFWRIIAKSIN-----KREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYS 511
            +LLS +I+     I++  IN     K ++N  P P    P+IGHL  L G  P   +  ++A KYGP+  ++LG+   +++SS E  K      D   A     +  + M YD      +PY  +WR +R+I  TELLS   +    ++R  E++  I+ L S
Sbjct:    4 DLLSAIIILVATYIVSLLINQWRKSKSQQNLPPSPPKL-PVIGHLHFLWGGLPQ-HVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGS 164          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14
Identity = 52/192 (27.08%), Postives = 98/192 (51.04%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            L+ L I+   +    K++NK     +P      PLIG+L  L+ Q P  + L  L+ +YGP+  L  G  P+++ S+ E  +D   T+DR+ A+  +    + + Y +   A APYG YWR ++ ++   LLS+  +   + VR  E+   ++ +    S+       V +SK++  LT ++  ++  G+++
Sbjct:    7 LIILFIITILFFKKHKTVNKIINFPSPP---RLPLIGNLHQLS-QHPH-RSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSK------PVNLSKILSSLTNDVICRVALGRKY 187          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.653e-14
Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 2
Query:   38 ELLSLLIVYCFWRIIAKSI----NKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLY 508
            EL+   I+Y    II + +    + R +   P P G WP+IG LPLL G   +   L  +A KYGPI  L++G   +++ S+    K    T D   +          M Y+      APYGP W+ +RK++   +L    LE   +VR +E+   +K ++
Sbjct:    7 ELIGATIIYIIVYIIIQKLIATGSWRRRRLPPGPEG-WPVIGALPLLGGMPHVA--LAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMF 164          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13
Identity = 55/196 (28.06%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 628
            LL L +   F++ +  S     K   P    + P+IG+L  L   + + +    L+ +YGP+  LR G  P+++ S+ E  ++   T+D    T  K+ A  L  Y+      A YG  WR++RK+A  EL SS +L+  +++R  E +  +K +    +E+A     V + K +   T +I  +L  G+ F   D
Sbjct:    8 LLLLPLFLVFYKRLLPS-----KGKLPPGPISLPIIGNLHQLG--KSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKV----TESAQTQTLVDLRKALFSYTASIVCRLAFGQNFHECD 192          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATT-AKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 499
            + L+    F  I+ +  NK +    P P    P+IGHL LL+      +    L+ +YGPI  L LG  P ++ S+ E  K+   T++   +   A  VA + + Y    F  APYGPYW+ ++K+  +ELL  H L+    VR  E   FIK
Sbjct:    8 ICLISTIVFASILWRKQNKNKTLLPPSPMPL-PIIGHLHLLSPTPH--QDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIK 157          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 51/195 (26.15%), Postives = 91/195 (46.67%), Query Frame = 2
Query:   35 FELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 619
            F LL    + C+  +  K  +        +   + P+IGHL  L       K L  L+ KYGP+  L +   P+++VSS  +  + F  +D  +++       + +   +++F  APYG YW+ ++K+  T+LL    LE  + +R  E++ F + L     + A     V I K   +L+ N   ++  G+ FS
Sbjct:   12 FILLCFFSLLCYSLLFKKLKDSHVGRDLLQSPPSLPIIGHLHHLLSSLAH-KSLQQLSSKYGPLLHLSIFNFPVVLVSSASVAYEIFKAHDLNISSRDNPPINESLLVGSSVFVGAPYGDYWKFMKKLLVTKLLGPQALERSRSIRADELERFYRSLL----DKAMKKESVEIGKEATKLSINSICRMSMGRSFS 201          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 51/158 (32.28%), Postives = 84/158 (53.16%), Query Frame = 2
Query:   47 SLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPIC-KILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATT-AKIVARKLMGYDNA--IFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLY 508
            +++  Y  WR       + +KN  P P  A P+IGHL L++   PI  +    L+ ++GPI  L LG  P ++ S+ E  K+   T++   +    + VA K + YD+   +FA AP+GPYW+ ++K+  +ELLS   ++    VR  E   FI  ++
Sbjct:   13 TIVFAYILWR------KQSKKNLPPSPK-ALPIIGHLHLVS---PIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVF 160          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 56/192 (29.17%), Postives = 94/192 (48.96%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSG-AWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            LSLL + C   + A +  KR+++    PS   +P+IG+L  L G+ P  + L  L+ KYG +  L+ G  P ++VSS E  K     +D    +   +   + + Y+    A +P+  YW+++R+I   EL S  R++  + ++  EV    K L    SE+A     V +S+    LT  ++ K   G  F
Sbjct:    7 LSLLFLSCIL-LAAFTHKKRQQHQRKPPSPPGFPIIGNLHQL-GELPH-QSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEV----KKLIDSVSESASQGTPVNLSEKFTSLTVRVTCKATFGVNF 191          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13
Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 499
            LL ++I+   + +   +   R+  +  +     P+IGHL LL G  P   +L ++A +YGP+  ++LG+   +++SS E  K      D   A     V  ++M YDN     +PY  +W  +RKI  +ELLS   +     +R  E++  I+
Sbjct:    6 LLVIIILVATYTVSLLNKQWRKPKSQQKQPPKLPVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIR 158          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13
Identity = 54/191 (28.27%), Postives = 89/191 (46.60%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            L  L++     I  K +   +    P P G  P+IG+L        + K L  ++ +YGP+  L  G  P++IVSS E  ++   T+D    +  K V   L  Y+      APYG  WR++RKIA +EL S  +L+  +++R  E    ++ +     E     + V + K+I     +I  +L  G+ F
Sbjct:    5 LCFLLLLPLSLIFLKKLLPSKGKLPPGPKGL-PIIGNLHQFG--RFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETP--TSSVNLRKVIFTFAASIICRLSFGQNF 190          
The following BLAST results are available for this feature:
BLAST of FC931192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C71DI_MENGR6.625e-1431.29Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71AN_ARATH6.625e-1427.08Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C75A2_SOLME8.653e-1430.43Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71BL_ARATH1.130e-1328.06Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN1.476e-1333.33Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C75AK_ARATH1.476e-1326.15Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C93A1_SOYBN1.928e-1332.28Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71BX_ARATH1.928e-1329.17Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C7D94_MENGR2.518e-1328.76Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71B5_ARATH2.518e-1328.27Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34102E02EF PostHarvP1 Citrus clementina cDNA clone C34102E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931192 ID=FC931192; Name=FC931192; organism=Citrus clementina; type=EST; length=629bp
GTCCATGGATTCTACTTCTTTCAGCCCACCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTGTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCAGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACTACGGCAAAAATTGTAGCACGCAAGTTGA
TGGGTTATGACAACGCCATTTTCGCACTTGCTCCCTACGGTCCGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCAGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTGACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATT
back to top