FC931192

Overview
NameFC931192
Unique NameFC931192
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:1..629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.356e-11
Identity = 48/189 (25.40%), Postives = 88/189 (46.56%), Query Frame = 2
Query:   50 LLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            L+ V     +++  + +R +   P      P++G+L  +      C      A  YGPI S+ +G    ++VSS E+ K+    +D+ LA   +  + +    +      A YGP++  +RK+ T EL +  RLE L+ +R  EV   ++ ++  C+        + + K +  + FN   +L  GKRF
Sbjct:    5 LIAVATIAAVVSYKLIQRLRYKFPPGPSPKPIVGNLYDIKPVRFRCYY--EWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRF 191          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.078e-11
Identity = 44/178 (24.72%), Postives = 81/178 (45.51%), Query Frame = 2
Query:   86 KSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 619
            +S  K+     P P G  P+IG+L  +    P    L  L+  YGPI+++++G   + ++SS E+ K+   T D        +  ++ M Y         Y  Y+R++RK+    L S +R+   + VR  E    +  +Y    ++      V +S+L+   T  +  +   GKR++
Sbjct:   20 RSTTKKSLRLPPGPKGL-PIIGNLHQMEKFNPQ-HFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQS----GTVDLSELLLSFTNCVVCRQAFGKRYN 191          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11
Identity = 57/203 (28.08%), Postives = 100/203 (49.26%), Query Frame = 2
Query:   20 FSPPIFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGA--WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDN-AIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 619
            F   +F L   ++ + F      +  +  +   P P G    P+IG++ L+ G+ P       L+  YGPI SL+ G    ++V+S E  ++   T D+IL++     + + + +D  ++  L P    WR +RK++ T+L S  R+E  K +R ++V    K+L S  SE++     V IS+     TF  +L +I+   FS
Sbjct:    5 FEQALFPLFCFVLSF-FIIFFTTTRPRSSRKVVPSPPGPPRLPIIGNIHLV-GRNPHHSFAD-LSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKV----KELVSFMSESSEREEAVDISR----ATFITALNIISNILFS 196          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11
Identity = 47/174 (27.01%), Postives = 82/174 (47.13%), Query Frame = 2
Query:   92 INKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 613
            +N R     P P G WP++G LPLL     +   L  +A KYGP+  L++G   + + S+ E  K    T D   +          + Y+      A YGP W+ +RK++   +L    L+  + VR  E+      LY++ +E+  +   VV+S+++     N+  +++  KR
Sbjct:   30 MNSRRHRLPPGPIG-WPVLGALPLLGTMPHVA--LANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYM---LYAM-AESGRHGQPVVVSEMLTYAMANMLGQVMLSKR 196          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11
Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = 2
Query:  119 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP-IYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGK 610
            P P    P+IGHL L+ G  P    L ALA +YGP +  LRLG  P ++VSS  + +    T D + ++  + +   ++ Y       APYG ++R  RK+ T  LL++ ++   +  R  EV    +         A     V +S+L+     N+  + ++GK
Sbjct:   69 PSPPMKLPIIGHLHLM-GDIPYVS-LAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEV----RGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGK 227          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11
Identity = 53/195 (27.18%), Postives = 88/195 (45.13%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 628
            L LL ++  + I+ K++    K   P P+G  PLIG+L  L     +   L  L+ ++GP+  +R G  P+ + SS E  K+   T+D       K+VA  L  +         YG  WR+++K    EL S  + +  +++R  E D  +K +    S  A     V + K +   T +I  +   G+ F   D
Sbjct:    5 LGLLFLFPLFFILFKNLLPPRKKLPPGPTGL-PLIGNLHQLG--RLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKI----SNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECD 192          
BLAST of FC931192 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11
Identity = 45/165 (27.27%), Postives = 78/165 (47.27%), Query Frame = 2
Query:  119 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATTAKIVARKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 613
            P P G WP+IG LPLL     +   L  +A KYG I  L++G   +++ S+ +  K    T D   +          + Y       A YGP W+ +RK++   +L    LE   +VR +E+   +K ++ +  E      +VV+++++     N+  ++I  KR
Sbjct:   35 PGPRG-WPVIGALPLLGAMPHVS--LAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDMSREG----ERVVVAEMLTFAMANMIGQVILSKR 192          
The following BLAST results are available for this feature:
BLAST of FC931192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C98A3_ARATH2.356e-1125.40Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C83B1_ARATH3.078e-1124.72Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH4.019e-1128.08Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C75A5_EUSGR5.250e-1127.01Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71C4_MAIZE5.250e-1129.09Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BU_ARATH6.856e-1127.18Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C75A3_PETHY8.954e-1127.27Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionC34102E02EF PostHarvP1 Citrus clementina cDNA clone C34102E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931192 ID=FC931192; Name=FC931192; organism=Citrus clementina; type=EST; length=629bp
GTCCATGGATTCTACTTCTTTCAGCCCACCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTGTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCAGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACTACGGCAAAAATTGTAGCACGCAAGTTGA
TGGGTTATGACAACGCCATTTTCGCACTTGCTCCCTACGGTCCGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCAGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTGACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATT
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