FC931199

Overview
NameFC931199
Unique NameFC931199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:1..687. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CDPKS_ARATH (Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.781e-62
Identity = 121/231 (52.38%), Postives = 153/231 (66.23%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL 687
            MELC GGEL DRI+ +    YSE+ AA + R ++ V   CH  G++HRD+KPENFL  +   D  LKA DFGLS F KPG+ F D+VGS YYVAPEVL +  GPE+DVW+ GVI YILL G  PFW  T+ GIF  VL+   DF   PW  ISDSAKD ++K+L   P  RLTA + L H W+ E G A D  +D +VL+ L+QF   ++LK+ ALR +A +L E EI+ L
Sbjct:  140 MELCEGGELLDRILSKKGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDMKPENFLFKSAQLDSPLKATDFGLSDFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDRTEDGIFKEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRARLTAAQALSHAWVREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDL 370          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CDPKI_ARATH (Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.016e-61
Identity = 115/231 (49.78%), Postives = 160/231 (69.26%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQR--GHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL 687
            MELC GGEL DRI+ +    Y+E+ AA + R ++ V   CH  G++HRD+KPENFL  + ++  SLKA DFGLS F KPG  F D+VGS YYVAPEVL +  GPE+DVW+ GVI YILL G  PFW +TQ GIF+ V++   DF   PWP IS+ AKD ++K+L  +P  RLTA + L H W+ E G A +  +D +VL+ ++QF   ++LK++ALR +A++++E+E+  L
Sbjct:  149 MELCDGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLRGLVHRDMKPENFLFKSTEEGSSLKATDFGLSDFIKPGVKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTQDGIFNEVMRKKPDFREVPWPTISNGAKDFVKKLLVKEPRARLTAAQALSHSWVKEGGEASEVPIDISVLNNMRQFVKFSRLKQIALRALAKTINEDELDDL 379          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CRK_DAUCA (CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.052e-58
Identity = 115/227 (50.66%), Postives = 151/227 (66.52%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEI 678
            MELC GGEL DRI+ RG  Y+E  A  +   I+ VV  CH  GV+HRDLKPENFL  +KD+D  LKAIDFGLS + KP +   D+VGS YYVAPEVL + Y  EADVW+ GVI YILL G  PFWA T+ GIF AVLK ++ F+  PWP +S  AKD ++++L   P +R+TA + LCH WI +N       LD  V   +K +   + L+K ALR ++++L+ +E+
Sbjct:  229 MELCEGGELLDRILSRGGKYTEDDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFKSKDEDSQLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVISYILLCGSRPFWARTESGIFRAVLKANLSFDEPPWPSVSSEAKDFVKRLLNKDPRKRMTAAQALCHSWI-KNSNDIKFPLDILVFKLMKVYMRSSPLRKAALRALSKTLTVDEL 454          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CAMK1_ORYSJ (Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.996e-58
Identity = 115/229 (50.22%), Postives = 152/229 (66.38%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRG-HYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI--CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEI 678
            MELC GGEL DRI+ RG  YSE  A  + R I+ V   CH  GV+HRDLKPENFL  +KD++ ++K IDFGLS F KP +   D+VGS YYVAPEVL + YG EAD+W+ GVI+YILL G  PFWA T+ GIF AVLK    FE  PWP +S  AKD +R++L     +R+TA + LCHPWI   E    P   LD  +   ++ + + + L++ ALR +A++L+ ++I
Sbjct:  228 MELCKGGELLDRILARGGKYSEEDAKVVMRQILSVASFCHLQGVVHRDLKPENFLFSSKDENSAMKVIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIVYILLCGSRPFWARTESGIFRAVLKADPSFEEAPWPTLSAEAKDFVRRLLNKDYRKRMTAAQALCHPWIRGTEEVKLP---LDMIIYRLMRAYISSSSLRRAALRALAKTLTTDQI 453          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 4.005e-50
Identity = 103/230 (44.78%), Postives = 140/230 (60.87%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR-SLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL 687
            MELC+G ELFD II+ G ++E+ AA + + I   +   HSL ++HRDLKPENFL  +++ D  LK IDFGLS     G+  T   G+PYYVAP+VL   Y  + D+W++GVI+Y LL G PPF+ +T   +   V KG   F  + W  IS  AK+LI K+L   P+ER T  E L HPWI +   + +   L   +L  LK F   N+LKK+AL +IA+ L + EI  L
Sbjct:  146 MELCSGRELFDSIIENGSFTEKNAATIMKQIFSAIFYLHSLNIVHRDLKPENFLFQSENKDSLLKIIDFGLSKNLGTGEFTTTKAGTPYYVAPQVLDGKYDKKCDIWSSGVIMYTLLCGYPPFYGDTDNEVLKKVKKGEFCFYENDWGSISSDAKNLITKLLTYNPNERCTIEEALNHPWITQMTKSHEHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNL 375          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAF7 (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate 3D7) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 4.005e-50
Identity = 103/230 (44.78%), Postives = 140/230 (60.87%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR-SLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL 687
            MELC+G ELFD II+ G ++E+ AA + + I   +   HSL ++HRDLKPENFL  +++ D  LK IDFGLS     G+  T   G+PYYVAP+VL   Y  + D+W++GVI+Y LL G PPF+ +T   +   V KG   F  + W  IS  AK+LI K+L   P+ER T  E L HPWI +   + +   L   +L  LK F   N+LKK+AL +IA+ L + EI  L
Sbjct:  146 MELCSGRELFDSIIENGSFTEKNAATIMKQIFSAIFYLHSLNIVHRDLKPENFLFQSENKDSLLKIIDFGLSKNLGTGEFTTTKAGTPYYVAPQVLDGKYDKKCDIWSSGVIMYTLLCGYPPFYGDTDNEVLKKVKKGEFCFYENDWGSISSDAKNLITKLLTYNPNERCTIEEALNHPWITQMTKSHEHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNL 375          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC1A_RAT (Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus GN=Camk1 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.333e-45
Identity = 93/212 (43.87%), Postives = 131/212 (61.79%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 633
            M+L +GGELFDRI+++G Y+ER A+ L   ++  V+  H LG++HRDLKPEN L  + D+D  +   DFGLS    PG + +   G+P YVAPEVL  K Y    D W+ GVI YILL G PPF+ E    +F+ +LK   +F+S  W  ISDSAKD IR ++   P +R T  + L HPWI     A D+++  +V  ++K+  A +K K+
Sbjct:   95 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC1A_MOUSE (Calcium/calmodulin-dependent protein kinase type 1 OS=Mus musculus GN=Camk1 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.333e-45
Identity = 93/212 (43.87%), Postives = 131/212 (61.79%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 633
            M+L +GGELFDRI+++G Y+ER A+ L   ++  V+  H LG++HRDLKPEN L  + D+D  +   DFGLS    PG + +   G+P YVAPEVL  K Y    D W+ GVI YILL G PPF+ E    +F+ +LK   +F+S  W  ISDSAKD IR ++   P +R T  + L HPWI     A D+++  +V  ++K+  A +K K+
Sbjct:   95 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC1A_HUMAN (Calcium/calmodulin-dependent protein kinase type 1 OS=Homo sapiens GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.333e-45
Identity = 93/212 (43.87%), Postives = 131/212 (61.79%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 633
            M+L +GGELFDRI+++G Y+ER A+ L   ++  V+  H LG++HRDLKPEN L  + D+D  +   DFGLS    PG + +   G+P YVAPEVL  K Y    D W+ GVI YILL G PPF+ E    +F+ +LK   +F+S  W  ISDSAKD IR ++   P +R T  + L HPWI     A D+++  +V  ++K+  A +K K+
Sbjct:   95 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC2B_RAT (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus GN=Camk2b PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.925e-44
Identity = 91/211 (43.13%), Postives = 126/211 (59.72%), Query Frame = 1
Query:    4 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ-IFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLK 630
            +L  GGELF+ I+ R +YSE  A+   + I+  V  CH +GV+HRDLKPEN LL +K    ++K  DFGL++  +  Q  +    G+P Y++PEVL K  YG   D+W  GVILYILL G PPFW E Q  ++  +  G  DF S  W  ++  AK+LI +ML   P++R+TAHE L HPW+C+             +  LK+F+A  KLK
Sbjct:   91 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 301          
The following BLAST results are available for this feature:
BLAST of FC931199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPKS_ARATH7.781e-6252.38Calcium-dependent protein kinase 28 OS=Arabidopsis... [more]
CDPKI_ARATH1.016e-6149.78Calcium-dependent protein kinase 18 OS=Arabidopsis... [more]
CRK_DAUCA1.052e-5850.66CDPK-related protein kinase OS=Daucus carota GN=CR... [more]
CAMK1_ORYSJ3.996e-5850.22Calcium/calmodulin-dependent serine/threonine-prot... [more]
CDPK2_PLAFK4.005e-5044.78Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
CDPK2_PLAF74.005e-5044.78Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
KCC1A_RAT1.333e-4543.87Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_MOUSE1.333e-4543.87Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_HUMAN1.333e-4543.87Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC2B_RAT1.925e-4443.13Calcium/calmodulin-dependent protein kinase type I... [more]

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Properties
Property NameValue
Genbank descriptionC34102E10EF PostHarvP1 Citrus clementina cDNA clone C34102E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931199 ID=FC931199; Name=FC931199; organism=Citrus clementina; type=EST; length=687bp
ATGGAGCTCTGTGCTGGAGGTGAGTTATTTGATAGGATCATCCAGAGGGG
ACATTACAGTGAGAGGAAGGCGGCTGAGTTGACAAGGATTATTGTTGGTG
TTGTTGAGGCTTGTCATTCACTGGGGGTTATGCACAGAGATCTAAAGCCT
GAGAACTTCTTGTTGGTTAACAAGGATGATGATTTCTCCCTTAAAGCTAT
TGATTTTGGACTCTCAGTTTTCTTCAAGCCAGGTCAAATATTTACTGATG
TTGTTGGAAGCCCATACTATGTCGCTCCTGAGGTACTTCTGAAACATTAT
GGACCAGAAGCAGATGTGTGGACAGCAGGGGTCATACTGTATATATTGCT
TAGTGGAGTGCCACCATTTTGGGCAGAAACACAACAGGGAATATTTGATG
CGGTGTTGAAGGGACACATTGACTTTGAGTCTGACCCTTGGCCACTAATA
TCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTATGCTCTCAACCATC
AGAACGCCTGACTGCTCATGAAGTTTTATGTCATCCCTGGATCTGTGAAA
ATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTGTACTTTCTCGTCTC
AAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCTTTACGGGTTAT
AGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTA
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