FC931199

Overview
NameFC931199
Unique NameFC931199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:1..687. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC1B_RAT (Calcium/calmodulin-dependent protein kinase type 1B OS=Rattus norvegicus GN=Pnck PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.572e-41
Identity = 92/212 (43.40%), Postives = 125/212 (58.96%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL-LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 633
            MEL  GGELFDRI++RG Y+E+ A+ L   ++G V   HSLG++HRDLKPEN L     +D  +   DFGLS   + G +     G+P YVAPE+L  K YG   DVW  GVI YILL G PPF+ E+   +F  +L+   +F+S  W  IS+SAKD IR +L   P +R T  + L H WI     A DR +  +V  ++++  A    K+
Sbjct:   90 MELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSKI-QAGNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVISYILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQKRFTCQQALQHLWI-SGDAALDRDILGSVSEQIQKNFARTHWKR 299          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC1B_HUMAN (Calcium/calmodulin-dependent protein kinase type 1B OS=Homo sapiens GN=PNCK PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 7.572e-41
Identity = 92/212 (43.40%), Postives = 125/212 (58.96%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL-LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 633
            MEL  GGELFDRI++RG Y+E+ A+ L   ++G V   HSLG++HRDLKPEN L     +D  +   DFGLS   + G +     G+P YVAPE+L  K YG   DVW  GVI YILL G PPF+ E+   +F  +L+   +F+S  W  IS+SAKD IR +L   P +R T  + L H WI     A DR +  +V  ++++  A    K+
Sbjct:   90 MELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSKI-QAGNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVISYILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQKRFTCQQALRHLWI-SGDTAFDRDILGSVSEQIRKNFARTHWKR 299          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC1B_MOUSE (Calcium/calmodulin-dependent protein kinase type 1B OS=Mus musculus GN=Pnck PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.889e-41
Identity = 92/212 (43.40%), Postives = 125/212 (58.96%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL-LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKK 633
            MEL  GGELFDRI++RG Y+E+ A+ L   ++G V   HSLG++HRDLKPEN L     +D  +   DFGLS   + G +     G+P YVAPE+L  K YG   DVW  GVI YILL G PPF+ E+   +F  +L+   +F+S  W  IS+SAKD IR +L   P +R T  + L H WI     A DR +  +V  ++++  A    K+
Sbjct:   90 MELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSKI-QAGNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVISYILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQKRFTCQQALQHLWI-SGDAAFDRDILGSVSEQIQKNFARTHWKR 299          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC4_RAT (Calcium/calmodulin-dependent protein kinase type IV OS=Rattus norvegicus GN=Camk4 PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.291e-40
Identity = 93/222 (41.89%), Postives = 128/222 (57.66%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES 660
            +EL  GGELFDRI+++G+YSER AA+  + I+  V   H  G++HRDLKPEN L      D  LK  DFGLS   +   +   V G+P Y APE+L    YGPE D+W+ G+I YILL G  PF+ E   Q +F  +L     F S  W  +S +AKDL++K++   P +RLT  + L HPW+   G A +         +L++F+A  KLK     V+A S
Sbjct:  114 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVKKLIVLDPKKRLTTFQALQHPWV--TGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 333          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC4_MOUSE (Calcium/calmodulin-dependent protein kinase type IV OS=Mus musculus GN=Camk4 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 92/222 (41.44%), Postives = 127/222 (57.21%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAET-QQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES 660
            +EL  GGELFDRI+++G+YSER A +  + I+  V   H  G++HRDLKPEN L      D  LK  DFGLS   +   +   V G+P Y APE+L    YGPE D+W+ G+I YILL G  PF+ E   Q +F  +L     F S  W  +S +AKDL++K++   P +RLT  + L HPW+   G A +         +L++F+A  KLK     V+A S
Sbjct:  114 LELVTGGELFDRIVEKGYYSERDARDAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVKKLIVLDPKKRLTTFQALQHPWV--TGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 333          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC2G_RAT (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus GN=Camk2g PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 87/221 (39.37%), Postives = 124/221 (56.11%), Query Frame = 1
Query:    4 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES 660
            +L  GGELF+ I+ R +YSE  A+     I+  V   H   ++HRDLKPEN LL +K    ++K  DFGL++  +   Q +    G+P Y++PEVL K  YG   D+W  GVILYILL G PPFW E Q  ++  +  G  DF S  W  ++  AK+LI +ML   P++R+TA + L HPW+C+             +  L++F+A  KLK   L  +  S
Sbjct:   91 DLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVS 311          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC2G_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus GN=Camk2g PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 87/221 (39.37%), Postives = 124/221 (56.11%), Query Frame = 1
Query:    4 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES 660
            +L  GGELF+ I+ R +YSE  A+     I+  V   H   ++HRDLKPEN LL +K    ++K  DFGL++  +   Q +    G+P Y++PEVL K  YG   D+W  GVILYILL G PPFW E Q  ++  +  G  DF S  W  ++  AK+LI +ML   P++R+TA + L HPW+C+             +  L++F+A  KLK   L  +  S
Sbjct:   91 DLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVS 311          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KCC2G_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Homo sapiens GN=CAMK2G PE=1 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 87/221 (39.37%), Postives = 124/221 (56.11%), Query Frame = 1
Query:    4 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES 660
            +L  GGELF+ I+ R +YSE  A+     I+  V   H   ++HRDLKPEN LL +K    ++K  DFGL++  +   Q +    G+P Y++PEVL K  YG   D+W  GVILYILL G PPFW E Q  ++  +  G  DF S  W  ++  AK+LI +ML   P++R+TA + L HPW+C+             +  L++F+A  KLK   L  +  S
Sbjct:   91 DLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVS 311          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAYO (Calcium-dependent protein kinase 1 OS=Plasmodium yoelii yoelii GN=CPK1 PE=3 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 92/227 (40.53%), Postives = 126/227 (55.51%), Query Frame = 1
Query:    4 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI---CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEE 675
            E   GGELF++II R  + E  AA + + I+  +   H   ++HRD+KPEN LL NK+   ++K +DFGLS FF       D +G+ YY+APEVL K Y  + DVW+ GVI+YILL G PPF  +  Q I   V KG   F+ + W  ISD AK+LI+ ML    ++R TA E L   WI     N    D+      LS +++F    KL + A+  I   L+  E
Sbjct:  145 EFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLE 371          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAFK (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK1 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 92/227 (40.53%), Postives = 126/227 (55.51%), Query Frame = 1
Query:    4 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI---CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEE 675
            E   GGELF++II R  + E  AA + + I+  +   H   ++HRD+KPEN LL NK    ++K +DFGLS FF       D +G+ YY+APEVL K Y  + DVW+ GVILYILL G PPF  +  Q I   V KG   F+ + W  IS+ AK+LI+ ML    ++R+TA E L   WI     N    D+      LS +++F    KL + A+  I   L+  E
Sbjct:  146 EFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKHSLLNIKIVDFGLSSFFSKDNKLRDRLGTAYYIAPEVLRKKYNEKCDVWSCGVILYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISEEAKELIKLMLTYDYNKRITAKEALNSKWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLE 372          
The following BLAST results are available for this feature:
BLAST of FC931199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KCC1B_RAT7.572e-4143.40Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1B_HUMAN7.572e-4143.40Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1B_MOUSE9.889e-4143.40Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC4_RAT1.291e-4041.89Calcium/calmodulin-dependent protein kinase type I... [more]
KCC4_MOUSE4.908e-4041.44Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2G_RAT4.908e-4039.37Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2G_MOUSE4.908e-4039.37Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2G_HUMAN4.908e-4039.37Calcium/calmodulin-dependent protein kinase type I... [more]
CDPK1_PLAYO4.908e-4040.53Calcium-dependent protein kinase 1 OS=Plasmodium y... [more]
CDPK1_PLAFK4.908e-4040.53Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34102E10EF PostHarvP1 Citrus clementina cDNA clone C34102E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931199 ID=FC931199; Name=FC931199; organism=Citrus clementina; type=EST; length=687bp
ATGGAGCTCTGTGCTGGAGGTGAGTTATTTGATAGGATCATCCAGAGGGG
ACATTACAGTGAGAGGAAGGCGGCTGAGTTGACAAGGATTATTGTTGGTG
TTGTTGAGGCTTGTCATTCACTGGGGGTTATGCACAGAGATCTAAAGCCT
GAGAACTTCTTGTTGGTTAACAAGGATGATGATTTCTCCCTTAAAGCTAT
TGATTTTGGACTCTCAGTTTTCTTCAAGCCAGGTCAAATATTTACTGATG
TTGTTGGAAGCCCATACTATGTCGCTCCTGAGGTACTTCTGAAACATTAT
GGACCAGAAGCAGATGTGTGGACAGCAGGGGTCATACTGTATATATTGCT
TAGTGGAGTGCCACCATTTTGGGCAGAAACACAACAGGGAATATTTGATG
CGGTGTTGAAGGGACACATTGACTTTGAGTCTGACCCTTGGCCACTAATA
TCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTATGCTCTCAACCATC
AGAACGCCTGACTGCTCATGAAGTTTTATGTCATCCCTGGATCTGTGAAA
ATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTGTACTTTCTCGTCTC
AAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCTTTACGGGTTAT
AGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTA
back to top