FC931199

Overview
NameFC931199
Unique NameFC931199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:1..687. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAF7 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) GN=CPK1 PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 92/227 (40.53%), Postives = 126/227 (55.51%), Query Frame = 1
Query:    4 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI---CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEE 675
            E   GGELF++II R  + E  AA + + I+  +   H   ++HRD+KPEN LL NK    ++K +DFGLS FF       D +G+ YY+APEVL K Y  + DVW+ GVILYILL G PPF  +  Q I   V KG   F+ + W  IS+ AK+LI+ ML    ++R+TA E L   WI     N    D+      LS +++F    KL + A+  I   L+  E
Sbjct:  146 EFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKHSLLNIKIVDFGLSSFFSKDNKLRDRLGTAYYIAPEVLRKKYNEKCDVWSCGVILYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISEEAKELIKLMLTYDYNKRITAKEALNSKWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLE 372          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: MYLKA_DICDI (Myosin light chain kinase A OS=Dictyostelium discoideum GN=mlkA PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.093e-39
Identity = 84/185 (45.41%), Postives = 111/185 (60.00%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVL-LKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICEN 552
            MEL  GGELFD+I+++G YSE  AA L + IV  V   H L ++HRDLKPEN LL +K++   +   DFGLS       +     G+P YVAPEVL    Y  E D+W+ GVI YILL G PPF+ +T   IF+ +++ + +F  + W  IS  AKD I K+L    S+RL A   L HPW+  N
Sbjct:   84 MELVTGGELFDKIVEKGSYSEADAANLVKKIVSAVGYLHGLNIVHRDLKPENLLLKSKENHLEVAIADFGLSKIIGQTLVMQTACGTPSYVAPEVLNATGYDKEVDMWSIGVITYILLCGFPPFYGDTVPEIFEQIMEANYEFPEEYWGGISKEAKDFIGKLLVVDVSKRLNATNALNHPWLKSN 268          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KPSH1_DANRE (Serine/threonine-protein kinase H1 homolog OS=Danio rerio GN=pskh1 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.436e-39
Identity = 82/184 (44.57%), Postives = 114/184 (61.96%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 543
            MEL  GGELFDRII RG ++ER A  + ++++  V+  H+LG+ HRDLKPEN L  +   D  +   DFGL+   K G   +     G+P Y+APE+L+ K Y    D+W  GVI YILLSG  PF  + +  ++  +LKG   F  +PWP +S+ AKD I ++L   P+ERL+A + L HPWI
Sbjct:  170 MELATGGELFDRIITRGSFTERDATRVLQMVLDGVKYLHTLGITHRDLKPENLLYYHPGADSKIMITDFGLASTRKKGDECLMKTTCGTPEYIAPEILVRKPYTNAVDMWALGVISYILLSGTMPFEDDNRMRLYRQILKGKYSFSGEPWPSVSNLAKDFIDRVLTVDPNERLSAGQALKHPWI 353          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: CCAMK_MEDTR (Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 OS=Medicago truncatula GN=DMI3 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.436e-39
Identity = 95/225 (42.22%), Postives = 134/225 (59.56%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVV----GSPYYVAPEVLLK-HYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAES 660
            +ELC+GGELFDRI+ +  YSE +AA +   I   +EA H   ++HRDLKPEN L ++   D  LK +DFGLS      + FTD V    GS  YV+PE L +     ++D+W+ GVILYILLSG PPF A+  +     ++ G+  F    W  IS  AK+LI  +L   PS+R +A E+L  PW+ +   A D  +DP ++SRL+ F+A  KL+  A+  +  S
Sbjct:  125 LELCSGGELFDRIVAQDKYSETEAATVVHQIASGLEAVHRANIVHRDLKPENCLFLDVRKDSPLKIMDFGLSSV----EEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYILLSGYPPFIAQNNRQKQQMIMNGNFSFYEKTWKGISQPAKNLISSLLTVDPSKRPSALELLSDPWV-KGEKAKDVQMDPEIVSRLQSFNARRKLRAAAIASVWSS 344          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: PHKG1_RABIT (Phosphorylase b kinase gamma catalytic chain, skeletal muscle isoform OS=Oryctolagus cuniculus GN=PHKG1 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37
Identity = 84/224 (37.50%), Postives = 123/224 (54.91%), Query Frame = 1
Query:    4 ELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLL-------KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIA 654
            +L   GELFD + ++   SE++  ++ R ++ V+ A H L ++HRDLKPEN LL   DDD ++K  DFG S    PG+   +V G+P Y+APE++          YG E D+W+ GVI+Y LL+G PPFW   Q  +   ++ G+  F S  W   SD+ KDL+ + L  QP +R TA E L HP+               V+  ++ FS   K K + L V+A
Sbjct:  105 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF-----------FQQYVVEEVRHFSPRGKFKVICLTVLA 314          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: DCLK1_RAT (Serine/threonine-protein kinase DCLK1 OS=Rattus norvegicus GN=Dclk1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37
Identity = 87/206 (42.23%), Postives = 128/206 (62.14%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV-NKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWA--ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQ 606
            MEL  GG+LFD I     Y+ER A+ +   +   ++  HSL ++HRD+KPEN L+  ++D   SLK  DFGL+     G ++T V G+P YVAPE++ +  YG + D+W AGVI YILL G PPF    + Q+ +FD +L G +DF S  W  +SDSAK+LI  ML     +R +A +VL HPW+ ++G+ P+     +V  ++K+
Sbjct:  158 MELVKGGDLFDAITSTSKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVYEHQDGSKSLKLGDFGLATIVD-GPLYT-VCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELINMMLLVNVDQRFSAVQVLEHPWVNDDGL-PENEHQLSVAGKIKK 360          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: DCLK1_MOUSE (Serine/threonine-protein kinase DCLK1 OS=Mus musculus GN=Dclk1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37
Identity = 87/206 (42.23%), Postives = 128/206 (62.14%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV-NKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWA--ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQ 606
            MEL  GG+LFD I     Y+ER A+ +   +   ++  HSL ++HRD+KPEN L+  ++D   SLK  DFGL+     G ++T V G+P YVAPE++ +  YG + D+W AGVI YILL G PPF    + Q+ +FD +L G +DF S  W  +SDSAK+LI  ML     +R +A +VL HPW+ ++G+ P+     +V  ++K+
Sbjct:  481 MELVKGGDLFDAITSTSKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVYEHQDGSKSLKLGDFGLATIVD-GPLYT-VCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELINMMLLVNVDQRFSAVQVLEHPWVNDDGL-PENEHQLSVAGKIKK 683          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KPSH1_HUMAN (Serine/threonine-protein kinase H1 OS=Homo sapiens GN=PSKH1 PE=1 SV=4)

HSP 1 Score: 156.377 bits (394), Expect = 1.337e-37
Identity = 78/184 (42.39%), Postives = 111/184 (60.33%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 543
            MEL  GGELFDRII +G ++ER A  + ++++  V   H+LG+ HRDLKPEN L  +   D  +   DFGL+   K G   +     G+P Y+APEVL+ K Y    D+W  GVI YILLSG  PF  + +  ++  +L+G   +  +PWP +S+ AKD I ++L   P  R+TA + L HPW+
Sbjct:  172 MELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLLYYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDMWALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVDPGARMTALQALRHPWV 355          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: KPSH1_BOVIN (Serine/threonine-protein kinase H1 OS=Bos taurus GN=PSKH1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.337e-37
Identity = 78/184 (42.39%), Postives = 111/184 (60.33%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQ--IFTDVVGSPYYVAPEVLL-KHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI 543
            MEL  GGELFDRII +G ++ER A  + ++++  V   H+LG+ HRDLKPEN L  +   D  +   DFGL+   K G   +     G+P Y+APEVL+ K Y    D+W  GVI YILLSG  PF  + +  ++  +L+G   +  +PWP +S+ AKD I ++L   P  R+TA + L HPW+
Sbjct:  172 MELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLLYYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDMWALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVDPGARMTALQALRHPWV 355          
BLAST of FC931199 vs. ExPASy Swiss-Prot
Match: DCLK1_HUMAN (Serine/threonine-protein kinase DCLK1 OS=Homo sapiens GN=DCLK1 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.337e-37
Identity = 87/206 (42.23%), Postives = 128/206 (62.14%), Query Frame = 1
Query:    1 MELCAGGELFDRIIQRGHYSERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLV-NKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKH-YGPEADVWTAGVILYILLSGVPPFWA--ETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQ 606
            MEL  GG+LFD I     Y+ER A+ +   +   ++  HSL ++HRD+KPEN L+  ++D   SLK  DFGL+     G ++T V G+P YVAPE++ +  YG + D+W AGVI YILL G PPF    + Q+ +FD +L G +DF S  W  +SDSAK+LI  ML     +R +A +VL HPW+ ++G+ P+     +V  ++K+
Sbjct:  465 MELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVYEHQDGSKSLKLGDFGLATIVD-GPLYT-VCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQRFSAVQVLEHPWVNDDGL-PENEHQLSVAGKIKK 667          
The following BLAST results are available for this feature:
BLAST of FC931199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPK1_PLAF74.908e-4040.53Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
MYLKA_DICDI1.093e-3945.41Myosin light chain kinase A OS=Dictyostelium disco... [more]
KPSH1_DANRE2.436e-3944.57Serine/threonine-protein kinase H1 homolog OS=Dani... [more]
CCAMK_MEDTR2.436e-3942.22Calcium and calcium/calmodulin-dependent serine/th... [more]
PHKG1_RABIT1.023e-3737.50Phosphorylase b kinase gamma catalytic chain, skel... [more]
DCLK1_RAT1.023e-3742.23Serine/threonine-protein kinase DCLK1 OS=Rattus no... [more]
DCLK1_MOUSE1.023e-3742.23Serine/threonine-protein kinase DCLK1 OS=Mus muscu... [more]
KPSH1_HUMAN1.337e-3742.39Serine/threonine-protein kinase H1 OS=Homo sapiens... [more]
KPSH1_BOVIN1.337e-3742.39Serine/threonine-protein kinase H1 OS=Bos taurus G... [more]
DCLK1_HUMAN1.337e-3742.23Serine/threonine-protein kinase DCLK1 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionC34102E10EF PostHarvP1 Citrus clementina cDNA clone C34102E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931199 ID=FC931199; Name=FC931199; organism=Citrus clementina; type=EST; length=687bp
ATGGAGCTCTGTGCTGGAGGTGAGTTATTTGATAGGATCATCCAGAGGGG
ACATTACAGTGAGAGGAAGGCGGCTGAGTTGACAAGGATTATTGTTGGTG
TTGTTGAGGCTTGTCATTCACTGGGGGTTATGCACAGAGATCTAAAGCCT
GAGAACTTCTTGTTGGTTAACAAGGATGATGATTTCTCCCTTAAAGCTAT
TGATTTTGGACTCTCAGTTTTCTTCAAGCCAGGTCAAATATTTACTGATG
TTGTTGGAAGCCCATACTATGTCGCTCCTGAGGTACTTCTGAAACATTAT
GGACCAGAAGCAGATGTGTGGACAGCAGGGGTCATACTGTATATATTGCT
TAGTGGAGTGCCACCATTTTGGGCAGAAACACAACAGGGAATATTTGATG
CGGTGTTGAAGGGACACATTGACTTTGAGTCTGACCCTTGGCCACTAATA
TCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTATGCTCTCAACCATC
AGAACGCCTGACTGCTCATGAAGTTTTATGTCATCCCTGGATCTGTGAAA
ATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTGTACTTTCTCGTCTC
AAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCTTTACGGGTTAT
AGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTA
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