FC931207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.444e-58 Identity = 102/219 (46.58%), Postives = 158/219 (72.15%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPP-ESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQW-KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 LP++V ++ + + +L ++TP+ + +DK+ W RD+EF+RQ +AG+NP +I +T +P S LDPEIYGP SA+T + I ++ G+ +V++A++ +LF++DYHD++LP+++++ L Y +RTI FLT GTL+PIAIEL+ P + Q K+V P +T W+W+LAKAHV ++DAG HQLV+HWLRTH C EP+++A +RQLS MHPI+ Sbjct: 394 LPKIVTTLQKSSEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSNLDPEIYGPGLHSALTEDHIIGQLDGL-TVQQALETNRLFMVDYHDIYLPFLDRINALDGRKAYATRTILFLTRLGTLKPIAIELSLPSQSSSNQKSKRVVTPPVDATSNWMWQLAKAHVGSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIF 611
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.303e-55 Identity = 106/219 (48.40%), Postives = 143/219 (65.30%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQ--VFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 LP L + G+N+L F P K W DEEF+R+ +AG+NP IR + E+P KSTLDP +YG S IT E +E +GG ++VEEA+ ++LFILDY D F+PY+ ++ L + Y +RTI FL GTL+P+AIEL++P +G + V LP+ + +W LAKAHV+ +D+GYHQLVSHWL TH EP+ IATNR LSV+HPIY Sbjct: 334 LPALKEIFRTDGENVLQFPPPHVAKVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIY 551
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.769e-54 Identity = 104/219 (47.49%), Postives = 146/219 (66.67%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 +P + + G+ L + P+ M DK W DEEF+R+T+AGLNP I++I E+PL S LD + YG I E +E +GG+ +VE+AI+ KKLFILD+HD +PY+ K+ +T Y +RTIFFL GTL P+AIEL++P G+ +V++P+ E ++W LAKA+V+ +DA YHQ++SHWL TH EP+VIATNRQLSV+HPIY Sbjct: 323 IPVIKEIFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIIAKEHLEPNLGGL-TVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKDDGTLTPLAIELSKPHPQGEEYGPVSEVYVPASEGVEAYIWLLAKAYVVVNDACYHQIISHWLSTHAIVEPFVIATNRQLSVVHPIY 539
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.464e-52 Identity = 99/219 (45.21%), Postives = 147/219 (67.12%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 +P + + G+ L + P+ M +K W DEEF+R+T+AG+NP I+ + E+P +S LD + +G S IT E +E +GG+ +VE+AI+ KKLFILD+HD +PY+ ++ +T Y +RTIFFL GTL P+AIEL++P G +V++P++ E ++W LAKA+V+ +D+ YHQLVSHWL TH EP+V+ATNRQLSV+HP+Y Sbjct: 217 IPIVKEIFRSDGEQFLKYPPPKVMQVNKSAWMTDEEFARETIAGVNPNVIKSLEEFPPRSKLDTQSFGDHTSIITKEHLEINLGGL-TVEQAIQSKKLFILDHHDYLIPYLRRINA-SATKTYATRTIFFLKSDGTLAPLAIELSKPHPQGDEHGPVSEVYVPAYEGVEAYIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFVLATNRQLSVVHPVY 433
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.299e-51 Identity = 101/217 (46.54%), Postives = 140/217 (64.52%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 +P L + + G+ +L F P + K W DEEF R+ LAG+NP I+ + E+P KS LD +YG S +T E +E +GG+ +VEEA+ +LFILD+HD F+PY+E++ L + Y +RTI FL TL+P+AIEL+ P GK +V LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIATNR LSV+HPIY Sbjct: 333 IPVLKEILRTDGEQVLKFPPPHVIRVTKSAWMTDEEFGREMLAGVNPCLIQRLQEFPPKSKLDVTVYGDQTSTMTKEHLEINLGGL-TVEEALHGNRLFILDHHDAFIPYLERINDLPTAKCYATRTILFLKDDNTLKPLAIELSLPNPGGKGANSRVILPADGGAESTIWLLAKAYVVVNDSCYHQLMSHWLNTHAVMEPFVIATNRHLSVLHPIY 548
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 6.446e-51 Identity = 106/237 (44.73%), Postives = 149/237 (62.87%), Query Frame = 1 Query: 4 GVNLPP-PKQEGFWNTLLPRLVKAIEDTGDNILL-FETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGK--PQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 G+ LP P E + +L+K + G + LL F P+ + ++ W DEEF+R+ LAGLNP IR +TE+P KSTLDP YG S IT IEK + G+ SV++A+ +L+ILD+HD F+P++ + L Y +RT+ FL TL+P+AIEL+ P + G +V P+ E W+W+LAKA+V +D+G+HQL+SHWL TH EP+VIATNRQLSV HP+Y Sbjct: 309 GLKLPSIPALEELRKSFPVQLIKDLLPVGGSYLLKFPKPDIIKENEVAWRTDEEFAREILAGLNPMVIRRLTEFPPKSTLDPSKYGDQTSTITPAHIEKNLEGL-SVQQALDSNRLYILDHHDHFMPFLIDINSLDGIFTYATRTLLFLRDDDTLKPLAIELSLPHIEGNLTSAKSKVHTPASSGIESWVWQLAKAYVAVNDSGWHQLISHWLNTHAVMEPFVIATNRQLSVTHPVY 544
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.099e-50 Identity = 96/208 (46.15%), Postives = 139/208 (66.83%), Query Frame = 1 Query: 85 GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 GD +L P + DKF W DEEF+R+ LAG+NP I+ +T +P KSTLDP +YG S IT I+ + G+ +V+ A+K +LFILD+HD F+P+++K+ +L +Y SRTI L GTL+P+AIEL+ P +G+ +V+ P+ E +W+LAKA+ +D+ +HQL+SHWL TH EP+VIATNRQLSV+HP++ Sbjct: 348 GDQVLKLPLPHVIKEDKFAWRTDEEFAREMLAGVNPVMIKRLTNFPAKSTLDPNVYGDHTSKITEAHIKHNMEGL-TVQNALKGNRLFILDHHDHFMPFLDKINKLDGNFIYASRTILLLKDDGTLKPLAIELSLPHPDGQQHGAVSKVYTPANTGVESQIWQLAKAYASVNDSAWHQLISHWLNTHAVIEPFVIATNRQLSVVHPVH 554
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 2.449e-50 Identity = 100/219 (45.66%), Postives = 140/219 (63.93%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 LP + + G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIY 525
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.199e-50 Identity = 103/219 (47.03%), Postives = 141/219 (64.38%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQ--WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 LP L + G+ L F P+ + K W DEEF+R+ LAG+NP IR + E+P +S LD ++YG S IT E +E + G+ +V+EAI+ K+LF+L +HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G + QVFLP+ E +W LAKA+V+ +D+ YHQLVSHWL TH EP++IATNR LSV+HPIY Sbjct: 328 LPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKEFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQNKRLFLLGHHDPIMPYLRRINAT-STKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIY 544
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.588e-49 Identity = 104/237 (43.88%), Postives = 149/237 (62.87%), Query Frame = 1 Query: 4 GVNLPP-PKQEGFWNTLLPRLVK-AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQ--VFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 G+ LP P E +LVK + GD IL P+ + +DK W DEEF+R+ LAG+NP I +TE+P KS+LDP +G S IT I + G+ +V++A+ +L+ILD+HD F+P++ V L+ +Y +RT+FFL GTL P+AIEL+ P + G + V+ P+ E W+W+LAKA+V +D+G+HQL+SHWL TH EP+VIATNRQLSV HP++ Sbjct: 312 GLKLPDVPALEELRKRFPLQLVKDLLPAAGDYILKLPMPQIIKQDKEAWRTDEEFAREVLAGVNPMMITRLTEFPPKSSLDPSKFGDHTSMITAAHIGSNLEGL-TVQQALDSNRLYILDHHDRFMPFLIDVNGLEGNFIYATRTLFFLRGDGTLAPLAIELSEPMIQGDVTAAKSTVYTPASTGVEAWVWQLAKAYVAVNDSGWHQLISHWLNTHAVMEPFVIATNRQLSVTHPVH 547 The following BLAST results are available for this feature:
BLAST of FC931207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931207 ID=FC931207; Name=FC931207; organism=Citrus clementina; type=EST; length=704bpback to top |